RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ZNF853P0CG23 659 aa29.12■■■□□ 2.25
SF1-220ENST00000626028 CCDC27Q2M243 656 aa29.12■■■□□ 2.25
SF1-220ENST00000626028 PRR5LQ6MZQ0 368 aa29.12■■■□□ 2.25
SF1-220ENST00000626028 KIF6Q6ZMV9 814 aa29.12■■■□□ 2.25
SF1-220ENST00000626028 CNBD1Q8NA66 436 aa29.12■■■□□ 2.25
SF1-220ENST00000626028 IFT57Q9NWB7 429 aa29.12■■■□□ 2.25
SF1-220ENST00000626028 LAS1LQ9Y4W2 734 aaKnown RBP29.12■■■□□ 2.25
SF1-220ENST00000626028 MAP3K15Q6ZN16 1313 aa29.12■■■□□ 2.25
SF1-220ENST00000626028 GNAI1P63096 354 aa29.11■■■□□ 2.25
SF1-220ENST00000626028 ZNF784Q8NCA9 323 aaPredicted RBP29.11■■■□□ 2.25
SF1-220ENST00000626028 H0YIN7 160 aa29.1■■■□□ 2.25
SF1-220ENST00000626028 MYL6BP14649 208 aa29.1■■■□□ 2.25
SF1-220ENST00000626028 ST5P78524 1137 aa29.1■■■□□ 2.25
SF1-220ENST00000626028 ATP10DQ9P241 1426 aa29.1■■■□□ 2.25
SF1-220ENST00000626028 CHRNA5P30532 468 aa29.09■■■□□ 2.25
SF1-220ENST00000626028 WWC3Q9ULE0 1092 aa29.09■■■□□ 2.25
SF1-220ENST00000626028 ARFGEF2Q9Y6D5 1785 aa29.08■■■□□ 2.25
SF1-220ENST00000626028 NPHP1O15259 732 aa29.08■■■□□ 2.25
SF1-220ENST00000626028 EIF2S2P20042 333 aaKnown RBP29.08■■■□□ 2.25
SF1-220ENST00000626028 PDIA6Q15084 440 aa29.08■■■□□ 2.25
SF1-220ENST00000626028 TPTE2Q6XPS3 522 aa29.08■■■□□ 2.25
SF1-220ENST00000626028 LRP10Q7Z4F1 713 aa29.08■■■□□ 2.25
SF1-220ENST00000626028 NBPF5PQ86XG9 351 aaPredicted RBP29.08■■■□□ 2.25
SF1-220ENST00000626028 NIP7Q9Y221 180 aaKnown RBP eCLIP29.08■■■□□ 2.25
SF1-220ENST00000626028 COL11A2P13942 1736 aaPredicted RBP29.08■■■□□ 2.25
SF1-220ENST00000626028 ANKRD36CQ5JPF3 1778 aa29.08■■■□□ 2.25
SF1-220ENST00000626028 SBF1O95248 1867 aa29.07■■■□□ 2.24
SF1-220ENST00000626028 C2CD5Q86YS7 1000 aa29.07■■■□□ 2.24
SF1-220ENST00000626028 MBIPQ9NS73 344 aa29.07■■■□□ 2.24
SF1-220ENST00000626028 HLFQ16534 295 aa29.06■■■□□ 2.24
SF1-220ENST00000626028 NGEFQ8N5V2 710 aa29.06■■■□□ 2.24
SF1-220ENST00000626028 ADCY9O60503 1353 aa29.05■■■□□ 2.24
SF1-220ENST00000626028 IBTKQ9P2D0 1353 aaPredicted RBP29.05■■■□□ 2.24
SF1-220ENST00000626028 CHMP4AQ9BY43 222 aa29.05■■■□□ 2.24
SF1-220ENST00000626028 DDX21Q9NR30 783 aaKnown RBP eCLIP29.05■■■□□ 2.24
SF1-220ENST00000626028 GIGYF2Q6Y7W6 1299 aaKnown RBP29.04■■■□□ 2.24
SF1-220ENST00000626028 TTLL7Q6ZT98 887 aa29.04■■■□□ 2.24
SF1-220ENST00000626028 TTLL6Q8N841 843 aa29.04■■■□□ 2.24
SF1-220ENST00000626028 NYXQ9GZU5 481 aa29.04■■■□□ 2.24
SF1-220ENST00000626028 CACNA1SQ13698 1873 aa29.02■■■□□ 2.24
SF1-220ENST00000626028 ARHGAP27Q6ZUM4 889 aa29.02■■■□□ 2.24
SF1-220ENST00000626028 HDGFL1Q5TGJ6 251 aa29.01■■■□□ 2.23
SF1-220ENST00000626028 DBF4Q9UBU7 674 aaPredicted RBP29.01■■■□□ 2.23
SF1-220ENST00000626028 IL16Q14005 1332 aa29■■■□□ 2.23
SF1-220ENST00000626028 KRT24Q2M2I5 525 aa29■■■□□ 2.23
SF1-220ENST00000626028 DUSP27Q5VZP5 1158 aa29■■■□□ 2.23
SF1-220ENST00000626028 WWC1Q8IX03 1113 aa29■■■□□ 2.23
SF1-220ENST00000626028 ZBTB3Q9H5J0 574 aa29■■■□□ 2.23
SF1-220ENST00000626028 CACNA1FO60840 1977 aa28.99■■■□□ 2.23
SF1-220ENST00000626028 KLRG2A4D1S0 409 aaPredicted RBP28.99■■■□□ 2.23
SF1-220ENST00000626028 PROSER3Q2NL68 480 aa28.99■■■□□ 2.23
SF1-220ENST00000626028 STYK1Q6J9G0 422 aa28.99■■■□□ 2.23
SF1-220ENST00000626028 RIC1Q4ADV7 1423 aa28.99■■■□□ 2.23
SF1-220ENST00000626028 CCDC88AQ3V6T2 1871 aa28.98■■■□□ 2.23
SF1-220ENST00000626028 SRGNP10124 158 aa28.98■■■□□ 2.23
SF1-220ENST00000626028 PARP10Q53GL7 1025 aa28.98■■■□□ 2.23
SF1-220ENST00000626028 ZNF34Q8IZ26 560 aa28.98■■■□□ 2.23
SF1-220ENST00000626028 CNKSR1Q969H4 720 aa28.98■■■□□ 2.23
SF1-220ENST00000626028 FER1L6Q2WGJ9 1857 aa28.97■■■□□ 2.23
SF1-220ENST00000626028 HSP90AB3PQ58FF7 597 aa28.97■■■□□ 2.23
SF1-220ENST00000626028 COPS6Q7L5N1 327 aa28.97■■■□□ 2.23
SF1-220ENST00000626028 MASTLQ96GX5 879 aa28.97■■■□□ 2.23
SF1-220ENST00000626028 HYPKQ9NX55 129 aa28.97■■■□□ 2.23
SF1-220ENST00000626028 SLX4Q8IY92 1834 aa28.97■■■□□ 2.23
SF1-220ENST00000626028 GTF2E1P29083 439 aaPredicted RBP28.96■■■□□ 2.23
SF1-220ENST00000626028 CHPF2Q9P2E5 772 aa28.96■■■□□ 2.23
SF1-220ENST00000626028 NECTIN2Q92692 538 aa28.95■■■□□ 2.22
SF1-220ENST00000626028 ZNF622Q969S3 477 aaKnown RBP eCLIP28.95■■■□□ 2.229e-15■□□□□ 10.7
SF1-220ENST00000626028 RNF123Q5XPI4 1314 aa28.94■■■□□ 2.22
SF1-220ENST00000626028 PPP1R42Q7Z4L9 355 aa28.94■■■□□ 2.22
SF1-220ENST00000626028 CCDC24Q8N4L8 307 aa28.94■■■□□ 2.22
SF1-220ENST00000626028 XAGE3Q8WTP9 111 aa28.94■■■□□ 2.22
SF1-220ENST00000626028 UBN2Q6ZU65 1347 aa28.94■■■□□ 2.22
SF1-220ENST00000626028 DICER1Q9UPY3 1922 aaKnown RBP28.93■■■□□ 2.22
SF1-220ENST00000626028 ANXA1P04083 346 aa28.93■■■□□ 2.22
SF1-220ENST00000626028 NPR1P16066 1061 aa28.93■■■□□ 2.22
SF1-220ENST00000626028 WDR63Q8IWG1 891 aa28.92■■■□□ 2.22
SF1-220ENST00000626028 SOGA3Q5TF21 947 aa28.91■■■□□ 2.22
SF1-220ENST00000626028 PLBD2Q8NHP8 589 aa28.91■■■□□ 2.22
SF1-220ENST00000626028 TNRC6CQ9HCJ0 1690 aaKnown RBP28.9■■■□□ 2.22
SF1-220ENST00000626028 GPTP24298 496 aa28.9■■■□□ 2.22
SF1-220ENST00000626028 CRY2Q49AN0 593 aa28.9■■■□□ 2.22
SF1-220ENST00000626028 AIMP1Q12904 312 aaKnown RBP28.89■■■□□ 2.22
SF1-220ENST00000626028 TCIRG1Q13488 830 aa28.89■■■□□ 2.22
SF1-220ENST00000626028 SUSD4Q5VX71 490 aa28.89■■■□□ 2.22
SF1-220ENST00000626028 ANKRD13DQ6ZTN6 518 aa28.89■■■□□ 2.22
SF1-220ENST00000626028 ZC3H4Q9UPT8 1303 aaKnown RBP28.89■■■□□ 2.21
SF1-220ENST00000626028 FAM177BA6PVY3 158 aa28.88■■■□□ 2.21
SF1-220ENST00000626028 NTSR2O95665 410 aa28.88■■■□□ 2.21
SF1-220ENST00000626028 CCDC30Q5VVM6 783 aa28.88■■■□□ 2.21
SF1-220ENST00000626028 C8orf58Q8NAV2 365 aa28.88■■■□□ 2.21
SF1-220ENST00000626028 ALDH1B1P30837 517 aa28.87■■■□□ 2.21
SF1-220ENST00000626028 C9orf131Q5VYM1 1079 aa28.87■■■□□ 2.21
SF1-220ENST00000626028 PRPF40BQ6NWY9 871 aaKnown RBP28.87■■■□□ 2.21
SF1-220ENST00000626028 FAM9BQ8IZU0 186 aa28.87■■■□□ 2.21
SF1-220ENST00000626028 GPBP1L1Q9HC44 474 aaPredicted RBP28.87■■■□□ 2.21
SF1-220ENST00000626028 ERFEQ4G0M1 354 aa28.86■■■□□ 2.21
SF1-220ENST00000626028 UTP14AQ9BVJ6 771 aaKnown RBP28.86■■■□□ 2.21
SF1-220ENST00000626028 LTBP3Q9NS15 1303 aa28.86■■■□□ 2.21
SF1-220ENST00000626028 ABCC12Q96J65 1359 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms