RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	NOP53	Q9NZM5	478 aa	Known RBP	10.59	□□□□□ -0.71
NRXN1-223	ENST00000625891	ZMIZ1	Q9ULJ6	1067 aa		10.59	□□□□□ -0.71
NRXN1-223	ENST00000625891		A0A1W2PNR3	127 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L15	C9J2P7	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L10	C9JJH3	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L13	C9JLJ4	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L12	C9JPN9	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L11	C9JVI0	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L21	D6R901	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L18	D6R9N7	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L22	D6RA61	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L17	D6RBQ6	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L19	D6RCP7	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L20	D6RJB6	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	MAPT	P10636	758 aa	Known RBP	10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	RASA1	P20936	1047 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	USP17L24	Q0WX57	530 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	CHSY3	Q70JA7	882 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	ZNF295-AS1	Q8N0V1	137 aa		10.58	□□□□□ -0.72
NRXN1-223	ENST00000625891	ADH6	P28332	368 aa		10.57	□□□□□ -0.72
NRXN1-223	ENST00000625891	CHRNA4	P43681	627 aa		10.57	□□□□□ -0.72
NRXN1-223	ENST00000625891	ATP1A2	P50993	1020 aa		10.57	□□□□□ -0.72
NRXN1-223	ENST00000625891	FCHSD1	Q86WN1	690 aa		10.57	□□□□□ -0.72
NRXN1-223	ENST00000625891	SIX5	Q8N196	739 aa		10.57	□□□□□ -0.72
NRXN1-223	ENST00000625891	LARGE2	Q8N3Y3	721 aa		10.57	□□□□□ -0.72
NRXN1-223	ENST00000625891	AVEN	Q9NQS1	362 aa	Predicted RBP	10.57	□□□□□ -0.72
NRXN1-223	ENST00000625891	DCDC2B	A2VCK2	349 aa		10.56	□□□□□ -0.72
NRXN1-223	ENST00000625891	CD33	P20138	364 aa		10.56	□□□□□ -0.72
NRXN1-223	ENST00000625891	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.55	□□□□□ -0.72
NRXN1-223	ENST00000625891	LARP1	Q6PKG0	1096 aa	Known RBP	10.55	□□□□□ -0.72
NRXN1-223	ENST00000625891	RETREG2	Q8NC44	543 aa		10.55	□□□□□ -0.72
NRXN1-223	ENST00000625891	SLC4A9	Q96Q91	983 aa		10.55	□□□□□ -0.72
NRXN1-223	ENST00000625891	SERTAD1	Q9UHV2	236 aa		10.55	□□□□□ -0.72
NRXN1-223	ENST00000625891	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.55	□□□□□ -0.72
NRXN1-223	ENST00000625891	ACIN1	Q9UKV3	1341 aa	Known RBP	10.55	□□□□□ -0.72
NRXN1-223	ENST00000625891	TMEM229A	B2RXF0	380 aa		10.54	□□□□□ -0.72
NRXN1-223	ENST00000625891	KHNYN	O15037	678 aa	Known RBP	10.54	□□□□□ -0.72
NRXN1-223	ENST00000625891	MTFR1	Q15390	333 aa		10.54	□□□□□ -0.72
NRXN1-223	ENST00000625891	NBPF1	Q3BBV0	1214 aa		10.54	□□□□□ -0.72
NRXN1-223	ENST00000625891	ZNF594	Q96JF6	807 aa	Predicted RBP	10.54	□□□□□ -0.72
NRXN1-223	ENST00000625891	ZIC5	Q96T25	663 aa		10.54	□□□□□ -0.72
NRXN1-223	ENST00000625891	NOVA2	Q9UNW9	492 aa	Known RBP	10.54	□□□□□ -0.72
NRXN1-223	ENST00000625891	CDK2AP1	O14519	115 aa		10.53	□□□□□ -0.72
NRXN1-223	ENST00000625891	ANKMY2	Q8IV38	441 aa		10.53	□□□□□ -0.72
NRXN1-223	ENST00000625891	STK32A	Q8WU08	396 aa		10.53	□□□□□ -0.72
NRXN1-223	ENST00000625891	ZDHHC3	Q9NYG2	299 aa		10.53	□□□□□ -0.72
NRXN1-223	ENST00000625891		A6NJY4	79 aa		10.52	□□□□□ -0.73
NRXN1-223	ENST00000625891	TMEM88B	A6NKF7	163 aa		10.52	□□□□□ -0.73
NRXN1-223	ENST00000625891	FAM157B	P0CG42	384 aa		10.52	□□□□□ -0.73
NRXN1-223	ENST00000625891	DPYD	Q12882	1025 aa		10.52	□□□□□ -0.73
NRXN1-223	ENST00000625891	CCDC102B	Q68D86	513 aa		10.52	□□□□□ -0.73
NRXN1-223	ENST00000625891	USP3	Q9Y6I4	520 aa		10.52	□□□□□ -0.73
NRXN1-223	ENST00000625891	TAT	P17735	454 aa	Predicted RBP	10.51	□□□□□ -0.73
NRXN1-223	ENST00000625891	ITGB7	P26010	798 aa		10.51	□□□□□ -0.73
NRXN1-223	ENST00000625891	PCBP4	P57723	403 aa	Known RBP	10.51	□□□□□ -0.73
NRXN1-223	ENST00000625891	TMEM164	Q5U3C3	297 aa		10.51	□□□□□ -0.73
NRXN1-223	ENST00000625891	ZNF468	Q5VIY5	522 aa	Predicted RBP	10.51	□□□□□ -0.73
NRXN1-223	ENST00000625891	TPCN2	Q8NHX9	752 aa		10.51	□□□□□ -0.73
NRXN1-223	ENST00000625891	TRIM11	Q96F44	468 aa		10.51	□□□□□ -0.73
NRXN1-223	ENST00000625891	FAM69C	Q0P6D2	419 aa		10.5	□□□□□ -0.73
NRXN1-223	ENST00000625891	PSME1	Q06323	249 aa		10.49	□□□□□ -0.73
NRXN1-223	ENST00000625891	SAMD5	Q5TGI4	173 aa		10.49	□□□□□ -0.73
NRXN1-223	ENST00000625891	STRN4	Q9NRL3	753 aa		10.49	□□□□□ -0.73
NRXN1-223	ENST00000625891	CABP1	Q9NZU7	370 aa		10.49	□□□□□ -0.73
NRXN1-223	ENST00000625891	PRR12	Q9ULL5	1215 aa		10.49	□□□□□ -0.73
NRXN1-223	ENST00000625891	UST	Q9Y2C2	406 aa		10.49	□□□□□ -0.73
NRXN1-223	ENST00000625891	EFS	O43281	561 aa		10.48	□□□□□ -0.73
NRXN1-223	ENST00000625891	DOC2B	Q14184	412 aa		10.48	□□□□□ -0.73
NRXN1-223	ENST00000625891	FAM200A	Q8TCP9	573 aa		10.48	□□□□□ -0.73
NRXN1-223	ENST00000625891	PLVAP	Q9BX97	442 aa		10.48	□□□□□ -0.73
NRXN1-223	ENST00000625891	KRTAP4-8	Q9BYQ9	185 aa		10.48	□□□□□ -0.73
NRXN1-223	ENST00000625891	GJA3	Q9Y6H8	435 aa		10.48	□□□□□ -0.73
NRXN1-223	ENST00000625891	CARNS1	A5YM72	827 aa		10.47	□□□□□ -0.73
NRXN1-223	ENST00000625891	SFI1	A8K8P3	1242 aa		10.47	□□□□□ -0.73
NRXN1-223	ENST00000625891		M0R2N6	131 aa		10.47	□□□□□ -0.73
NRXN1-223	ENST00000625891	SEC13	P55735	322 aa		10.47	□□□□□ -0.73
NRXN1-223	ENST00000625891	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
NRXN1-223	ENST00000625891	SEMA6B	Q9H3T3	888 aa		10.47	□□□□□ -0.73
NRXN1-223	ENST00000625891	ZNF358	Q9NW07	568 aa		10.47	□□□□□ -0.73
NRXN1-223	ENST00000625891	MARK1	Q9P0L2	795 aa		10.47	□□□□□ -0.73
NRXN1-223	ENST00000625891	SPATA31C1	P0DKV0	1188 aa		10.46	□□□□□ -0.73
NRXN1-223	ENST00000625891	LAMC2	Q13753	1193 aa		10.46	□□□□□ -0.73
NRXN1-223	ENST00000625891	GATA4	P43694	442 aa		10.45	□□□□□ -0.74
NRXN1-223	ENST00000625891	SLAIN2	Q9P270	581 aa		10.45	□□□□□ -0.74
NRXN1-223	ENST00000625891	PARP3	Q9Y6F1	533 aa		10.45	□□□□□ -0.74
NRXN1-223	ENST00000625891	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.44	□□□□□ -0.74
NRXN1-223	ENST00000625891	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.44	□□□□□ -0.74
NRXN1-223	ENST00000625891	EPHA4	P54764	986 aa		10.44	□□□□□ -0.74
NRXN1-223	ENST00000625891	ELOA3B	Q3SY89	546 aa		10.44	□□□□□ -0.74
NRXN1-223	ENST00000625891	BICDL1	Q6ZP65	573 aa		10.44	□□□□□ -0.74
NRXN1-223	ENST00000625891	ELOA3	Q8NG57	546 aa		10.44	□□□□□ -0.74
NRXN1-223	ENST00000625891	MDFI	Q99750	246 aa		10.44	□□□□□ -0.74
NRXN1-223	ENST00000625891	TRAIP	Q9BWF2	469 aa		10.44	□□□□□ -0.74
NRXN1-223	ENST00000625891	TXLNA	P40222	546 aa		10.43	□□□□□ -0.74
NRXN1-223	ENST00000625891	SWI5	Q1ZZU3	235 aa		10.43	□□□□□ -0.74
NRXN1-223	ENST00000625891	TSEN2	Q8NCE0	465 aa	Known RBP	10.43	□□□□□ -0.74
NRXN1-223	ENST00000625891	ZDHHC1	Q8WTX9	485 aa		10.43	□□□□□ -0.74
NRXN1-223	ENST00000625891	BACH1	O14867	736 aa		10.42	□□□□□ -0.74
NRXN1-223	ENST00000625891	SYT9	Q86SS6	491 aa		10.42	□□□□□ -0.74
NRXN1-223	ENST00000625891	CLP1	Q92989	425 aa	Known RBP	10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms