RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 NEFHP12036 1026 aa12.92□□□□□ -0.34
VPS8-227ENST00000625842 PLS1Q14651 629 aa12.92□□□□□ -0.34
VPS8-227ENST00000625842 ARHGAP27Q6ZUM4 889 aa12.92□□□□□ -0.34
VPS8-227ENST00000625842 SETQ01105 290 aaPredicted RBP12.92□□□□□ -0.34
VPS8-227ENST00000625842 NME9Q86XW9 330 aa12.92□□□□□ -0.34
VPS8-227ENST00000625842 CNKSR1Q969H4 720 aa12.92□□□□□ -0.34
VPS8-227ENST00000625842 SEPT7Q16181 437 aaKnown RBP12.92□□□□□ -0.34
VPS8-227ENST00000625842 USHBP1Q8N6Y0 703 aa12.92□□□□□ -0.34
VPS8-227ENST00000625842 ERCC4Q92889 916 aaPredicted RBP12.92□□□□□ -0.34
VPS8-227ENST00000625842 ANKRD13DQ6ZTN6 518 aa12.92□□□□□ -0.34
VPS8-227ENST00000625842 ZNF213O14771 459 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 C14orf93Q9H972 538 aaKnown RBP12.91□□□□□ -0.34
VPS8-227ENST00000625842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
VPS8-227ENST00000625842 A2MP01023 1474 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 TRPM2O94759 1503 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 AMPD3Q01432 767 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 USP48Q86UV5 1035 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 NLGN1Q8N2Q7 840 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 CAGE1Q8TC20 777 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
VPS8-227ENST00000625842 ZFYP08048 801 aaPredicted RBP12.91□□□□□ -0.34
VPS8-227ENST00000625842 NOM1Q5C9Z4 860 aaKnown RBP12.91□□□□□ -0.34
VPS8-227ENST00000625842 ZMYM3Q14202 1370 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 ABCC10Q5T3U5 1492 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 PRC1O43663 620 aa12.91□□□□□ -0.34
VPS8-227ENST00000625842 CUL7Q14999 1698 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 NBPF1Q3BBV0 1214 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 ELMSAN1Q6PJG2 1045 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 DCPSQ96C86 337 aaKnown RBP12.9□□□□□ -0.34
VPS8-227ENST00000625842 FOXD4L6Q3SYB3 417 aaPredicted RBP12.9□□□□□ -0.34
VPS8-227ENST00000625842 CCDC174Q6PII3 467 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 FOXD4L3Q6VB84 417 aaPredicted RBP12.9□□□□□ -0.34
VPS8-227ENST00000625842 SULF1Q8IWU6 871 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 GZF1Q9H116 711 aaPredicted RBP12.9□□□□□ -0.34
VPS8-227ENST00000625842 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.9□□□□□ -0.34
VPS8-227ENST00000625842 PNMA2Q9UL42 364 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 SLC12A7Q9Y666 1083 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 RABEP1Q15276 862 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 JAKMIP3Q5VZ66 844 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 CFAP45Q9UL16 551 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 NSD3Q9BZ95 1437 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 M0QZ92 97 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 DCAF15Q66K64 600 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 HACE1Q8IYU2 909 aa12.9□□□□□ -0.34
VPS8-227ENST00000625842 SEPT11Q9NVA2 429 aaKnown RBP12.9□□□□□ -0.34
VPS8-227ENST00000625842 PPIP5K1Q6PFW1 1433 aa12.89□□□□□ -0.35
VPS8-227ENST00000625842 FAM98CQ17RN3 349 aaKnown RBP12.89□□□□□ -0.35
VPS8-227ENST00000625842 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
VPS8-227ENST00000625842 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
VPS8-227ENST00000625842 EIF4G3O43432 1585 aaKnown RBP12.89□□□□□ -0.35
VPS8-227ENST00000625842 PLCH2O75038 1416 aa12.89□□□□□ -0.35
VPS8-227ENST00000625842 ATP5J2-PTCD1G3V325 749 aa12.89□□□□□ -0.35
VPS8-227ENST00000625842 SMCR8Q8TEV9 937 aaPredicted RBP12.89□□□□□ -0.35
VPS8-227ENST00000625842 DKC1O60832 514 aaKnown RBP eCLIP12.89□□□□□ -0.35
VPS8-227ENST00000625842 KDM4AO75164 1064 aa12.89□□□□□ -0.35
VPS8-227ENST00000625842 DPP8Q6V1X1 898 aaPredicted RBP12.89□□□□□ -0.35
VPS8-227ENST00000625842 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
VPS8-227ENST00000625842 PDILTQ8N807 584 aa12.89□□□□□ -0.35
VPS8-227ENST00000625842 CALML4Q96GE6 196 aa12.89□□□□□ -0.35
VPS8-227ENST00000625842 TCP11L1Q9NUJ3 509 aa12.89□□□□□ -0.35
VPS8-227ENST00000625842 NBPF7P0C2Y1 421 aaPredicted RBP12.88□□□□□ -0.35
VPS8-227ENST00000625842 CCDC148Q8NFR7 591 aa12.88□□□□□ -0.35
VPS8-227ENST00000625842 SPATA32Q96LK8 384 aa12.88□□□□□ -0.35
VPS8-227ENST00000625842 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
VPS8-227ENST00000625842 PPFIBP1Q86W92 1011 aa12.88□□□□□ -0.35
VPS8-227ENST00000625842 AS3MTQ9HBK9 375 aa12.88□□□□□ -0.35
VPS8-227ENST00000625842 C6orf50Q9HD87 102 aa12.88□□□□□ -0.35
VPS8-227ENST00000625842 NOC2LQ9Y3T9 749 aaKnown RBP12.88□□□□□ -0.35
VPS8-227ENST00000625842 TSPY3P0CV98 308 aa12.88□□□□□ -0.35
VPS8-227ENST00000625842 TSPY8P0CW00 308 aa12.88□□□□□ -0.35
VPS8-227ENST00000625842 DISP3Q9P2K9 1392 aa12.88□□□□□ -0.35
VPS8-227ENST00000625842 KDM5BQ9UGL1 1544 aa12.88□□□□□ -0.35
VPS8-227ENST00000625842 IRX3P78415 501 aaPredicted RBP12.88□□□□□ -0.35
VPS8-227ENST00000625842 NAA16Q6N069 864 aaPredicted RBP12.88□□□□□ -0.35
VPS8-227ENST00000625842 NOB1Q9ULX3 412 aaKnown RBP12.88□□□□□ -0.35
VPS8-227ENST00000625842 STX6O43752 255 aa12.87□□□□□ -0.35
VPS8-227ENST00000625842 NLRP5P59047 1200 aa12.87□□□□□ -0.35
VPS8-227ENST00000625842 ARHGEF10LQ9HCE6 1279 aa12.87□□□□□ -0.35
VPS8-227ENST00000625842 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
VPS8-227ENST00000625842 COMMD10Q9Y6G5 202 aa12.87□□□□□ -0.35
VPS8-227ENST00000625842 PIK3R4Q99570 1358 aa12.87□□□□□ -0.35
VPS8-227ENST00000625842 GGA1Q9UJY5 639 aa12.87□□□□□ -0.35
VPS8-227ENST00000625842 IFIT3O14879 490 aaKnown RBP12.87□□□□□ -0.35
VPS8-227ENST00000625842 GCP02774 474 aa12.87□□□□□ -0.35
VPS8-227ENST00000625842 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
VPS8-227ENST00000625842 NEK4P51957 841 aa12.87□□□□□ -0.35
VPS8-227ENST00000625842 ZNF397Q8NF99 534 aaPredicted RBP12.87□□□□□ -0.35
VPS8-227ENST00000625842 SMARCC2Q8TAQ2 1214 aa12.87□□□□□ -0.35
VPS8-227ENST00000625842 BICD1Q96G01 975 aa12.87□□□□□ -0.35
VPS8-227ENST00000625842 PTPRCP08575 1304 aa12.86□□□□□ -0.35
VPS8-227ENST00000625842 CCDC112Q8NEF3 446 aa12.86□□□□□ -0.35
VPS8-227ENST00000625842 NAP1L4Q99733 375 aaKnown RBP12.86□□□□□ -0.35
VPS8-227ENST00000625842 F8W031 263 aaPredicted RBP12.86□□□□□ -0.35
VPS8-227ENST00000625842 BIRC2Q13490 618 aa12.86□□□□□ -0.35
VPS8-227ENST00000625842 IMPG2Q9BZV3 1241 aa12.86□□□□□ -0.35
VPS8-227ENST00000625842 ARGLU1Q9NWB6 273 aaPredicted RBP12.86□□□□□ -0.35
VPS8-227ENST00000625842 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms