RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 HSPA4P34932 840 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 AIMP1Q12904 312 aaKnown RBP10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 SLC39A6Q13433 755 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 PKP1Q13835 747 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 KLHL40Q2TBA0 621 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 IL25Q9H293 177 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 GRPEL1Q9HAV7 217 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 CRYBG1Q9Y4K1 1723 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 TNS3Q68CZ2 1445 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 CUL4AQ13619 759 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 MCTP1Q6DN14 999 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 LARP1Q6PKG0 1096 aaKnown RBP10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 RIC3Q7Z5B4 369 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 CADPS2Q86UW7 1296 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 NFATC2IPQ8NCF5 419 aa10.1□□□□□ -0.79
SND1-IT1-201ENST00000623342 C5P01031 1676 aa10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 RAD50Q92878 1312 aa10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 FAM43AQ8N2R8 423 aa10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 GPATCH3Q96I76 525 aa10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 SUCLG2Q96I99 432 aa10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 DDX49Q9Y6V7 483 aaKnown RBP10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 IFIT2P09913 472 aaKnown RBP10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 NEXNQ0ZGT2 675 aa10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 INTS4Q96HW7 963 aaKnown RBP10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 DCAF5Q96JK2 942 aa10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 ECHDC1Q9NTX5 307 aa10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 PA2G4Q9UQ80 394 aaKnown RBP10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 ZDHHC9Q9Y397 364 aa10.09□□□□□ -0.79
SND1-IT1-201ENST00000623342 MRC1P22897 1456 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 KAZALD1Q96I82 304 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 PANK2Q9BZ23 570 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 LSG1Q9H089 658 aaKnown RBP10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 BICC1Q9H694 974 aaKnown RBP10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 IGKV5-2P06315 115 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 MYL6BP14649 208 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 CHRNA2Q15822 529 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 TTC5Q8N0Z6 440 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 XAGE3Q8WTP9 111 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 RUFY2Q8WXA3 655 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 ZNF496Q96IT1 587 aaPredicted RBP10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 UPF3BQ9BZI7 483 aaKnown RBP10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 LMBRD1Q9NUN5 540 aa10.08□□□□□ -0.8
SND1-IT1-201ENST00000623342 SPATA31A3Q5VYP0 1347 aa10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 NEURL1BA8MQ27 555 aa10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 SNRPA1P09661 255 aaKnown RBP10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 G3BP1Q13283 466 aaKnown RBP eCLIP10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 CWC27Q6UX04 472 aaKnown RBP10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 DIAPH3Q9NSV4 1193 aa10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 CYP27B1O15528 508 aa10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 NOL8Q76FK4 1167 aaKnown RBP10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 COPS6Q7L5N1 327 aa10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 AACSQ86V21 672 aa10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 GAS2L3Q86XJ1 694 aa10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 METTL22Q9BUU2 404 aaPredicted RBP10.07□□□□□ -0.8
SND1-IT1-201ENST00000623342 CPDO75976 1380 aa10.06□□□□□ -0.8
SND1-IT1-201ENST00000623342 SASH1O94885 1247 aa10.06□□□□□ -0.8
SND1-IT1-201ENST00000623342 GCKRQ14397 625 aa10.06□□□□□ -0.8
SND1-IT1-201ENST00000623342 EVI5LQ96CN4 794 aa10.06□□□□□ -0.8
SND1-IT1-201ENST00000623342 FMNL2Q96PY5 1086 aa10.06□□□□□ -0.8
SND1-IT1-201ENST00000623342 SNX14Q9Y5W7 946 aa10.06□□□□□ -0.8
SND1-IT1-201ENST00000623342 BRD1O95696 1058 aa10.06□□□□□ -0.8
SND1-IT1-201ENST00000623342 ANKRD13DQ6ZTN6 518 aa10.06□□□□□ -0.8
SND1-IT1-201ENST00000623342 MYD88Q99836 296 aa10.06□□□□□ -0.8
SND1-IT1-201ENST00000623342 USP16Q9Y5T5 823 aa10.06□□□□□ -0.8
SND1-IT1-201ENST00000623342 CABP4P57796 275 aa10.05□□□□□ -0.8
SND1-IT1-201ENST00000623342 LRP10Q7Z4F1 713 aa10.05□□□□□ -0.8
SND1-IT1-201ENST00000623342 PRPF40AO75400 957 aaKnown RBP10.05□□□□□ -0.8
SND1-IT1-201ENST00000623342 EAF2Q96CJ1 260 aaPredicted RBP10.05□□□□□ -0.8
SND1-IT1-201ENST00000623342 NCLP19338 710 aaKnown RBP10.04□□□□□ -0.8
SND1-IT1-201ENST00000623342 BRINP3Q76B58 766 aa10.04□□□□□ -0.8
SND1-IT1-201ENST00000623342 RASEFQ8IZ41 740 aa10.04□□□□□ -0.8
SND1-IT1-201ENST00000623342 TTC14Q96N46 770 aa10.04□□□□□ -0.8
SND1-IT1-201ENST00000623342 HIP1O00291 1037 aa10.04□□□□□ -0.8
SND1-IT1-201ENST00000623342 ZNF445P59923 1031 aa10.04□□□□□ -0.8
SND1-IT1-201ENST00000623342 CCDC8Q9H0W5 538 aaPredicted RBP10.04□□□□□ -0.8
SND1-IT1-201ENST00000623342 SIL1Q9H173 461 aa10.04□□□□□ -0.8
SND1-IT1-201ENST00000623342 PARP4Q9UKK3 1724 aaKnown RBP10.03□□□□□ -0.8
SND1-IT1-201ENST00000623342 EPHA10Q5JZY3 1008 aa10.03□□□□□ -0.8
SND1-IT1-201ENST00000623342 FOXD4L5Q5VV16 416 aaPredicted RBP10.03□□□□□ -0.8
SND1-IT1-201ENST00000623342 CAVIN1Q6NZI2 390 aaKnown RBP10.03□□□□□ -0.8
SND1-IT1-201ENST00000623342 FOXD4L4Q8WXT5 416 aaPredicted RBP10.03□□□□□ -0.8
SND1-IT1-201ENST00000623342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.03□□□□□ -0.8
SND1-IT1-201ENST00000623342 PTH1RQ03431 593 aa10.02□□□□□ -0.8
SND1-IT1-201ENST00000623342 LIMCH1Q9UPQ0 1083 aa10.02□□□□□ -0.8
SND1-IT1-201ENST00000623342 COL15A1P39059 1388 aa10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 LAMB4A4D0S4 1761 aa10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 AK2P54819 239 aa10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 ZSCAN23Q3MJ62 389 aa10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 KLHDC4Q8TBB5 520 aa10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 GPT2Q8TD30 523 aa10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 KCNB2Q92953 911 aa10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 COPRSQ9NQ92 184 aa10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 TLR7Q9NYK1 1049 aaKnown RBP10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 WDR33Q9C0J8 1336 aaKnown RBP10.02□□□□□ -0.81
SND1-IT1-201ENST00000623342 EP400Q96L91 3159 aa10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 CASTP20810 708 aaKnown RBP10.01□□□□□ -0.81
SND1-IT1-201ENST00000623342 PLBD2Q8NHP8 589 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms