RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 RIC3Q7Z5B4 369 aa18.79■□□□□ 0.6
ATRX-211ENST00000623321 IL27Q8NEV9 243 aa18.79■□□□□ 0.6
ATRX-211ENST00000623321 ANTXR1Q9H6X2 564 aa18.79■□□□□ 0.6
ATRX-211ENST00000623321 ALDH1L1O75891 902 aa18.77■□□□□ 0.6
ATRX-211ENST00000623321 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.6
ATRX-211ENST00000623321 USP44Q9H0E7 712 aa18.77■□□□□ 0.6
ATRX-211ENST00000623321 LOC102724428A0A0B4J2F2 783 aa18.76■□□□□ 0.59
ATRX-211ENST00000623321 SIK1P57059 783 aa18.76■□□□□ 0.59
ATRX-211ENST00000623321 RBM6P78332 1123 aaKnown RBP18.76■□□□□ 0.59
ATRX-211ENST00000623321 FAM182BQ5T319 152 aa18.76■□□□□ 0.59
ATRX-211ENST00000623321 RPAP2Q8IXW5 612 aaPredicted RBP18.76■□□□□ 0.59
ATRX-211ENST00000623321 LINS1Q8NG48 757 aa18.76■□□□□ 0.59
ATRX-211ENST00000623321 PALLDQ8WX93 1383 aa18.76■□□□□ 0.59
ATRX-211ENST00000623321 GNAI2P04899 355 aa18.75■□□□□ 0.59
ATRX-211ENST00000623321 PLBD2Q8NHP8 589 aa18.75■□□□□ 0.59
ATRX-211ENST00000623321 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
ATRX-211ENST00000623321 NEXNQ0ZGT2 675 aa18.75■□□□□ 0.59
ATRX-211ENST00000623321 SIRT2Q8IXJ6 389 aa18.75■□□□□ 0.59
ATRX-211ENST00000623321 METTL22Q9BUU2 404 aaPredicted RBP18.75■□□□□ 0.59
ATRX-211ENST00000623321 ATP6V1AP38606 617 aa18.74■□□□□ 0.59
ATRX-211ENST00000623321 ANKRD44Q8N8A2 993 aa18.74■□□□□ 0.59
ATRX-211ENST00000623321 TJP1Q07157 1748 aa18.74■□□□□ 0.59
ATRX-211ENST00000623321 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
ATRX-211ENST00000623321 UBTFL1P0CB47 393 aaPredicted RBP18.73■□□□□ 0.59
ATRX-211ENST00000623321 CEP85Q6P2H3 762 aa18.73■□□□□ 0.59
ATRX-211ENST00000623321 TTLL7Q6ZT98 887 aa18.73■□□□□ 0.59
ATRX-211ENST00000623321 IBTKQ9P2D0 1353 aaPredicted RBP18.73■□□□□ 0.59
ATRX-211ENST00000623321 CWF19L2Q2TBE0 894 aaKnown RBP18.72■□□□□ 0.59
ATRX-211ENST00000623321 PTF1AQ7RTS3 328 aa18.72■□□□□ 0.59
ATRX-211ENST00000623321 ILDR1Q86SU0 546 aaPredicted RBP18.72■□□□□ 0.59
ATRX-211ENST00000623321 IGKV5-2P06315 115 aa18.71■□□□□ 0.59
ATRX-211ENST00000623321 NUCB1Q02818 461 aa18.71■□□□□ 0.59
ATRX-211ENST00000623321 KRT27Q7Z3Y8 459 aa18.71■□□□□ 0.59
ATRX-211ENST00000623321 MYD88Q99836 296 aa18.71■□□□□ 0.59
ATRX-211ENST00000623321 C22orf23Q9BZE7 217 aa18.71■□□□□ 0.59
ATRX-211ENST00000623321 SLKQ9H2G2 1235 aaPredicted RBP18.71■□□□□ 0.59
ATRX-211ENST00000623321 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.59
ATRX-211ENST00000623321 C9orf78Q9NZ63 289 aaPredicted RBP18.71■□□□□ 0.59
ATRX-211ENST00000623321 NBPF7P0C2Y1 421 aaPredicted RBP18.7■□□□□ 0.58
ATRX-211ENST00000623321 ITPK1Q13572 414 aa18.7■□□□□ 0.58
ATRX-211ENST00000623321 GCC1Q96CN9 775 aa18.7■□□□□ 0.58
ATRX-211ENST00000623321 HDAC5Q9UQL6 1122 aa18.7■□□□□ 0.58
ATRX-211ENST00000623321 ZBTB1Q9Y2K1 713 aa18.7■□□□□ 0.58
ATRX-211ENST00000623321 ZNF831Q5JPB2 1677 aa18.7■□□□□ 0.58
ATRX-211ENST00000623321 NEURL1BA8MQ27 555 aa18.69■□□□□ 0.58
ATRX-211ENST00000623321 IL6STP40189 918 aaPredicted RBP18.69■□□□□ 0.58
ATRX-211ENST00000623321 FAM196AQ6ZSG2 479 aa18.69■□□□□ 0.58
ATRX-211ENST00000623321 BRPF3Q9ULD4 1205 aa18.69■□□□□ 0.58
ATRX-211ENST00000623321 ZNF330Q9Y3S2 320 aaPredicted RBP18.69■□□□□ 0.58
ATRX-211ENST00000623321 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
ATRX-211ENST00000623321 ARFGEF2Q9Y6D5 1785 aa18.69■□□□□ 0.58
ATRX-211ENST00000623321 BTAF1O14981 1849 aa18.69■□□□□ 0.58
ATRX-211ENST00000623321 SBF2Q86WG5 1849 aa18.69■□□□□ 0.58
ATRX-211ENST00000623321 UTYO14607 1347 aa18.68■□□□□ 0.58
ATRX-211ENST00000623321 BRWD3Q6RI45 1802 aa18.68■□□□□ 0.58
ATRX-211ENST00000623321 GRM8O00222 908 aa18.68■□□□□ 0.58
ATRX-211ENST00000623321 HMMRO75330 724 aa18.68■□□□□ 0.58
ATRX-211ENST00000623321 RXRBP28702 533 aa18.68■□□□□ 0.58
ATRX-211ENST00000623321 INTS5Q6P9B9 1019 aaKnown RBP18.68■□□□□ 0.58
ATRX-211ENST00000623321 KIF6Q6ZMV9 814 aa18.68■□□□□ 0.58
ATRX-211ENST00000623321 BCL11BQ9C0K0 894 aaPredicted RBP18.68■□□□□ 0.58
ATRX-211ENST00000623321 CCDC87Q9NVE4 849 aa18.68■□□□□ 0.58
ATRX-211ENST00000623321 CRKLP46109 303 aaKnown RBP18.67■□□□□ 0.58
ATRX-211ENST00000623321 MFAP1P55081 439 aaKnown RBP18.67■□□□□ 0.58
ATRX-211ENST00000623321 ATP8B2P98198 1209 aa18.67■□□□□ 0.58
ATRX-211ENST00000623321 GCKRQ14397 625 aa18.67■□□□□ 0.58
ATRX-211ENST00000623321 ZBTB3Q9H5J0 574 aa18.67■□□□□ 0.58
ATRX-211ENST00000623321 DCTPP1Q9H773 170 aa18.67■□□□□ 0.58
ATRX-211ENST00000623321 NUP188Q5SRE5 1749 aa18.66■□□□□ 0.58
ATRX-211ENST00000623321 MAP3K15Q6ZN16 1313 aa18.66■□□□□ 0.58
ATRX-211ENST00000623321 ATP5J2-PTCD1G3V325 749 aa18.65■□□□□ 0.58
ATRX-211ENST00000623321 EIF5P55010 431 aaKnown RBP18.65■□□□□ 0.58
ATRX-211ENST00000623321 CHD1LQ86WJ1 897 aa18.65■□□□□ 0.58
ATRX-211ENST00000623321 RGS17Q9UGC6 210 aaPredicted RBP18.65■□□□□ 0.58
ATRX-211ENST00000623321 RREB1Q92766 1687 aa18.64■□□□□ 0.57
ATRX-211ENST00000623321 RBM25P49756 843 aaKnown RBP18.64■□□□□ 0.57
ATRX-211ENST00000623321 TCIRG1Q13488 830 aa18.64■□□□□ 0.57
ATRX-211ENST00000623321 ARXQ96QS3 562 aa18.64■□□□□ 0.57
ATRX-211ENST00000623321 COL5A3P25940 1745 aaPredicted RBP18.63■□□□□ 0.57
ATRX-211ENST00000623321 PNMA6EA0A0J9YXQ4 647 aa18.63■□□□□ 0.57
ATRX-211ENST00000623321 ERVV-1B6SEH8 477 aa18.63■□□□□ 0.57
ATRX-211ENST00000623321 BMP2KLQ5H9B9 411 aa18.63■□□□□ 0.57
ATRX-211ENST00000623321 GIGYF2Q6Y7W6 1299 aaKnown RBP18.63■□□□□ 0.57
ATRX-211ENST00000623321 DZIP3Q86Y13 1208 aaKnown RBP18.63■□□□□ 0.57
ATRX-211ENST00000623321 CCDC191Q8NCU4 936 aa18.63■□□□□ 0.57
ATRX-211ENST00000623321 LINC00116Q8NCU8 138 aa18.63■□□□□ 0.57
ATRX-211ENST00000623321 TRIM28Q13263 835 aaKnown RBP18.62■□□□□ 0.57
ATRX-211ENST00000623321 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
ATRX-211ENST00000623321 ISCA1Q9BUE6 129 aa18.62■□□□□ 0.57
ATRX-211ENST00000623321 CWC25Q9NXE8 425 aaPredicted RBP18.62■□□□□ 0.57
ATRX-211ENST00000623321 CCNL1Q9UK58 526 aaPredicted RBP18.62■□□□□ 0.57
ATRX-211ENST00000623321 AFDNP55196 1824 aaKnown RBP18.62■□□□□ 0.57
ATRX-211ENST00000623321 CNTNAP4Q9C0A0 1308 aa18.62■□□□□ 0.57
ATRX-211ENST00000623321 A0A087WZG4 1122 aa18.61■□□□□ 0.57
ATRX-211ENST00000623321 HSP90AB3PQ58FF7 597 aa18.61■□□□□ 0.57
ATRX-211ENST00000623321 PPP1R42Q7Z4L9 355 aa18.61■□□□□ 0.57
ATRX-211ENST00000623321 SSH3Q8TE77 659 aa18.61■□□□□ 0.57
ATRX-211ENST00000623321 SUCLG2Q96I99 432 aa18.61■□□□□ 0.57
ATRX-211ENST00000623321 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
ATRX-211ENST00000623321 LY75O60449 1722 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms