RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MYT1Q01538 1121 aa26.65■■□□□ 1.86
SPAST-204ENST00000621856 PPP1R42Q7Z4L9 355 aa26.65■■□□□ 1.86
SPAST-204ENST00000621856 NPM2Q86SE8 214 aaKnown RBP26.65■■□□□ 1.86
SPAST-204ENST00000621856 ANP32AP39687 249 aaKnown RBP26.65■■□□□ 1.86
SPAST-204ENST00000621856 EXOC6BQ9Y2D4 811 aa26.65■■□□□ 1.86
SPAST-204ENST00000621856 SSH3Q8TE77 659 aa26.64■■□□□ 1.85
SPAST-204ENST00000621856 IBTKQ9P2D0 1353 aaPredicted RBP26.63■■□□□ 1.85
SPAST-204ENST00000621856 SMARCA5O60264 1052 aaPredicted RBP26.63■■□□□ 1.85
SPAST-204ENST00000621856 TTLL7Q6ZT98 887 aa26.63■■□□□ 1.85
SPAST-204ENST00000621856 UTYO14607 1347 aa26.63■■□□□ 1.85
SPAST-204ENST00000621856 NUP188Q5SRE5 1749 aa26.63■■□□□ 1.85
SPAST-204ENST00000621856 SRGAP3O43295 1099 aa26.62■■□□□ 1.85
SPAST-204ENST00000621856 POLA2Q14181 598 aa26.62■■□□□ 1.85
SPAST-204ENST00000621856 GCKRQ14397 625 aa26.62■■□□□ 1.85
SPAST-204ENST00000621856 SUCLG2Q96I99 432 aa26.6■■□□□ 1.85
SPAST-204ENST00000621856 ZNF330Q9Y3S2 320 aaPredicted RBP26.6■■□□□ 1.85
SPAST-204ENST00000621856 TJP1Q07157 1748 aa26.59■■□□□ 1.85
SPAST-204ENST00000621856 SLC4A9Q96Q91 983 aa26.59■■□□□ 1.85
SPAST-204ENST00000621856 AFF2P51816 1311 aa26.59■■□□□ 1.85
SPAST-204ENST00000621856 ATP5J2-PTCD1G3V325 749 aa26.59■■□□□ 1.85
SPAST-204ENST00000621856 C16orf71Q8IYS4 520 aaPredicted RBP26.59■■□□□ 1.85
SPAST-204ENST00000621856 LRRCC1Q9C099 1032 aa26.59■■□□□ 1.85
SPAST-204ENST00000621856 MTX1Q13505 466 aa26.58■■□□□ 1.85
SPAST-204ENST00000621856 PLEKHM2Q8IWE5 1019 aa26.58■■□□□ 1.85
SPAST-204ENST00000621856 ZBTB3Q9H5J0 574 aa26.58■■□□□ 1.85
SPAST-204ENST00000621856 CYP19A1P11511 503 aaPredicted RBP26.57■■□□□ 1.84
SPAST-204ENST00000621856 BMP2KLQ5H9B9 411 aa26.57■■□□□ 1.84
SPAST-204ENST00000621856 SURF6O75683 361 aaKnown RBP26.56■■□□□ 1.84
SPAST-204ENST00000621856 THSD7AQ9UPZ6 1657 aa26.56■■□□□ 1.84
SPAST-204ENST00000621856 KIF6Q6ZMV9 814 aa26.56■■□□□ 1.84
SPAST-204ENST00000621856 RAB11FIP3O75154 756 aa26.55■■□□□ 1.84
SPAST-204ENST00000621856 BICC1Q9H694 974 aaKnown RBP26.55■■□□□ 1.84
SPAST-204ENST00000621856 OTUD7AQ8TE49 926 aaPredicted RBP26.54■■□□□ 1.84
SPAST-204ENST00000621856 KAZALD1Q96I82 304 aa26.53■■□□□ 1.84
SPAST-204ENST00000621856 GJD4Q96KN9 370 aaPredicted RBP26.53■■□□□ 1.84
SPAST-204ENST00000621856 A0A087WZG4 1122 aa26.53■■□□□ 1.84
SPAST-204ENST00000621856 HSP90AB4PQ58FF6 505 aa26.53■■□□□ 1.84
SPAST-204ENST00000621856 SMARCC1Q92922 1105 aaPredicted RBP26.53■■□□□ 1.84
SPAST-204ENST00000621856 KCNQ2O43526 872 aa26.52■■□□□ 1.84
SPAST-204ENST00000621856 SEC24BO95487 1268 aa26.52■■□□□ 1.84
SPAST-204ENST00000621856 UBE3BQ7Z3V4 1068 aa26.52■■□□□ 1.84
SPAST-204ENST00000621856 ARXQ96QS3 562 aa26.52■■□□□ 1.84
SPAST-204ENST00000621856 CWC25Q9NXE8 425 aaPredicted RBP26.52■■□□□ 1.84
SPAST-204ENST00000621856 PALLDQ8WX93 1383 aa26.52■■□□□ 1.84
SPAST-204ENST00000621856 JARID2Q92833 1246 aaPredicted RBP26.51■■□□□ 1.83
SPAST-204ENST00000621856 ATP6V1AP38606 617 aa26.51■■□□□ 1.83
SPAST-204ENST00000621856 OS9Q13438 667 aaPredicted RBP26.51■■□□□ 1.83
SPAST-204ENST00000621856 TTC22Q5TAA0 569 aa26.51■■□□□ 1.83
SPAST-204ENST00000621856 ZBTB1Q9Y2K1 713 aa26.51■■□□□ 1.83
SPAST-204ENST00000621856 ATRNO75882 1429 aa26.5■■□□□ 1.83
SPAST-204ENST00000621856 LOC102724428A0A0B4J2F2 783 aa26.5■■□□□ 1.83
SPAST-204ENST00000621856 SIK1P57059 783 aa26.5■■□□□ 1.83
SPAST-204ENST00000621856 UPF2Q9HAU5 1272 aaKnown RBP26.5■■□□□ 1.83
SPAST-204ENST00000621856 TRPC5Q9UL62 973 aaPredicted RBP26.5■■□□□ 1.83
SPAST-204ENST00000621856 KIF1BPQ96EK5 621 aa26.49■■□□□ 1.83
SPAST-204ENST00000621856 CCDC191Q8NCU4 936 aa26.48■■□□□ 1.83
SPAST-204ENST00000621856 NOP58Q9Y2X3 529 aaKnown RBP26.48■■□□□ 1.83
SPAST-204ENST00000621856 MAP3K15Q6ZN16 1313 aa26.48■■□□□ 1.83
SPAST-204ENST00000621856 COL15A1P39059 1388 aa26.48■■□□□ 1.83
SPAST-204ENST00000621856 GSPT1P15170 499 aaKnown RBP26.48■■□□□ 1.83
SPAST-204ENST00000621856 TCIRG1Q13488 830 aa26.48■■□□□ 1.83
SPAST-204ENST00000621856 RHPN1Q8TCX5 695 aa26.48■■□□□ 1.83
SPAST-204ENST00000621856 EPHA10Q5JZY3 1008 aa26.47■■□□□ 1.83
SPAST-204ENST00000621856 IL1RAPL2Q9NP60 686 aa26.47■■□□□ 1.83
SPAST-204ENST00000621856 CICQ96RK0 1608 aaPredicted RBP26.47■■□□□ 1.83
SPAST-204ENST00000621856 H7C1W4 665 aa26.46■■□□□ 1.83
SPAST-204ENST00000621856 IL6STP40189 918 aaPredicted RBP26.46■■□□□ 1.83
SPAST-204ENST00000621856 PDE1AP54750 535 aa26.45■■□□□ 1.83
SPAST-204ENST00000621856 CASP7P55210 303 aa26.45■■□□□ 1.83
SPAST-204ENST00000621856 ISCA1Q9BUE6 129 aa26.45■■□□□ 1.83
SPAST-204ENST00000621856 CCDC87Q9NVE4 849 aa26.45■■□□□ 1.83
SPAST-204ENST00000621856 PA2G4Q9UQ80 394 aaKnown RBP26.45■■□□□ 1.83
SPAST-204ENST00000621856 IPO9Q96P70 1041 aaKnown RBP26.45■■□□□ 1.82
SPAST-204ENST00000621856 OSBPL3Q9H4L5 887 aa26.45■■□□□ 1.82
SPAST-204ENST00000621856 MX1P20591 662 aa26.44■■□□□ 1.82
SPAST-204ENST00000621856 ERC1Q8IUD2 1116 aa26.44■■□□□ 1.82
SPAST-204ENST00000621856 CRKLP46109 303 aaKnown RBP26.43■■□□□ 1.82
SPAST-204ENST00000621856 ITPK1Q13572 414 aa26.43■■□□□ 1.82
SPAST-204ENST00000621856 SALL3Q9BXA9 1300 aa26.43■■□□□ 1.82
SPAST-204ENST00000621856 NHSQ6T4R5 1651 aa26.43■■□□□ 1.82
SPAST-204ENST00000621856 INTS5Q6P9B9 1019 aaKnown RBP26.42■■□□□ 1.82
SPAST-204ENST00000621856 GIGYF2Q6Y7W6 1299 aaKnown RBP26.42■■□□□ 1.82
SPAST-204ENST00000621856 RREB1Q92766 1687 aa26.42■■□□□ 1.82
SPAST-204ENST00000621856 CDC45O75419 566 aa26.42■■□□□ 1.82
SPAST-204ENST00000621856 MFAP1P55081 439 aaKnown RBP26.42■■□□□ 1.82
SPAST-204ENST00000621856 G3BP1Q13283 466 aaKnown RBP eCLIP26.42■■□□□ 1.82
SPAST-204ENST00000621856 RABL6Q3YEC7 729 aaPredicted RBP26.42■■□□□ 1.82
SPAST-204ENST00000621856 HSP90AB3PQ58FF7 597 aa26.42■■□□□ 1.82
SPAST-204ENST00000621856 RTL5Q5HYW3 569 aaPredicted RBP26.42■■□□□ 1.82
SPAST-204ENST00000621856 DZIP3Q86Y13 1208 aaKnown RBP26.42■■□□□ 1.82
SPAST-204ENST00000621856 ANKRD36CQ5JPF3 1778 aa26.41■■□□□ 1.82
SPAST-204ENST00000621856 TRIM28Q13263 835 aaKnown RBP26.41■■□□□ 1.82
SPAST-204ENST00000621856 ZNF831Q5JPB2 1677 aa26.4■■□□□ 1.82
SPAST-204ENST00000621856 BTAF1O14981 1849 aa26.4■■□□□ 1.82
SPAST-204ENST00000621856 HLFQ16534 295 aa26.4■■□□□ 1.82
SPAST-204ENST00000621856 FAM182BQ5T319 152 aa26.4■■□□□ 1.82
SPAST-204ENST00000621856 QTRT2Q9H974 415 aaKnown RBP26.4■■□□□ 1.82
SPAST-204ENST00000621856 ONECUT3O60422 494 aaPredicted RBP26.39■■□□□ 1.82
SPAST-204ENST00000621856 NUTM1Q86Y26 1132 aa26.39■■□□□ 1.82
SPAST-204ENST00000621856 SEPT12Q8IYM1 358 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms