RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 BICC1Q9H694 974 aaKnown RBP12.21□□□□□ -0.45
VTA1-205ENST00000620996 PKD1L3Q7Z443 1732 aa12.21□□□□□ -0.46
VTA1-205ENST00000620996 METTL22Q9BUU2 404 aaPredicted RBP12.21□□□□□ -0.46
VTA1-205ENST00000620996 NEURL1BA8MQ27 555 aa12.2□□□□□ -0.46
VTA1-205ENST00000620996 UBE3BQ7Z3V4 1068 aa12.2□□□□□ -0.46
VTA1-205ENST00000620996 RHPN1Q8TCX5 695 aa12.2□□□□□ -0.46
VTA1-205ENST00000620996 C5P01031 1676 aa12.2□□□□□ -0.46
VTA1-205ENST00000620996 TTLL7Q6ZT98 887 aa12.2□□□□□ -0.46
VTA1-205ENST00000620996 PIGBQ92521 554 aa12.2□□□□□ -0.46
VTA1-205ENST00000620996 KIF1BPQ96EK5 621 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 A0A087WZG4 1122 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 NBPF26B4DH59 902 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 GCKRQ14397 625 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
VTA1-205ENST00000620996 NBPF14Q5TI25 921 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 NBPF10Q6P3W6 841 aaKnown RBP12.19□□□□□ -0.46
VTA1-205ENST00000620996 NBPF15Q8N660 670 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 KLHDC4Q8TBB5 520 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 ACSBG1Q96GR2 724 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 ADAMTS7Q9UKP4 1686 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 MRC1P22897 1456 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 RAB11FIP3O75154 756 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 POLA2Q14181 598 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 HSP90AB4PQ58FF6 505 aa12.19□□□□□ -0.46
VTA1-205ENST00000620996 G3BP1Q13283 466 aaKnown RBP eCLIP12.18□□□□□ -0.464e-7■■□□□ 14.2
VTA1-205ENST00000620996 HSCBQ8IWL3 235 aa12.18□□□□□ -0.46
VTA1-205ENST00000620996 DNAJC10Q8IXB1 793 aa12.18□□□□□ -0.46
VTA1-205ENST00000620996 C8orf37Q96NL8 207 aa12.18□□□□□ -0.46
VTA1-205ENST00000620996 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
VTA1-205ENST00000620996 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
VTA1-205ENST00000620996 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
VTA1-205ENST00000620996 DDB1Q16531 1140 aa12.17□□□□□ -0.46
VTA1-205ENST00000620996 CLASRPQ8N2M8 674 aaKnown RBP12.17□□□□□ -0.46
VTA1-205ENST00000620996 PLBD2Q8NHP8 589 aa12.17□□□□□ -0.46
VTA1-205ENST00000620996 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
VTA1-205ENST00000620996 AACSQ86V21 672 aa12.16□□□□□ -0.46
VTA1-205ENST00000620996 ATG3Q9NT62 314 aa12.16□□□□□ -0.46
VTA1-205ENST00000620996 LTBP4Q8N2S1 1624 aa12.16□□□□□ -0.46
VTA1-205ENST00000620996 HSP90AA1P07900 732 aaKnown RBP12.15□□□□□ -0.46
VTA1-205ENST00000620996 EPHA10Q5JZY3 1008 aa12.15□□□□□ -0.46
VTA1-205ENST00000620996 NGLY1Q96IV0 654 aa12.15□□□□□ -0.46
VTA1-205ENST00000620996 PHLPP1O60346 1717 aa12.15□□□□□ -0.46
VTA1-205ENST00000620996 STARD3NLO95772 234 aa12.15□□□□□ -0.46
VTA1-205ENST00000620996 KIF6Q6ZMV9 814 aa12.15□□□□□ -0.46
VTA1-205ENST00000620996 LRP10Q7Z4F1 713 aa12.15□□□□□ -0.46
VTA1-205ENST00000620996 KAZALD1Q96I82 304 aa12.15□□□□□ -0.46
VTA1-205ENST00000620996 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
VTA1-205ENST00000620996 AHDC1Q5TGY3 1603 aaPredicted RBP12.15□□□□□ -0.47
VTA1-205ENST00000620996 COL14A1Q05707 1796 aaKnown RBP12.15□□□□□ -0.47
VTA1-205ENST00000620996 CCDC8Q9H0W5 538 aaPredicted RBP12.14□□□□□ -0.47
VTA1-205ENST00000620996 ERC1Q8IUD2 1116 aa12.14□□□□□ -0.47
VTA1-205ENST00000620996 UNC5CLQ8IV45 518 aa12.14□□□□□ -0.47
VTA1-205ENST00000620996 CCDC85AQ96PX6 553 aaPredicted RBP12.14□□□□□ -0.47
VTA1-205ENST00000620996 CWC25Q9NXE8 425 aaPredicted RBP12.14□□□□□ -0.47
VTA1-205ENST00000620996 ERC2O15083 957 aa12.13□□□□□ -0.47
VTA1-205ENST00000620996 GPATCH3Q96I76 525 aa12.13□□□□□ -0.47
VTA1-205ENST00000620996 OSBPL3Q9H4L5 887 aa12.13□□□□□ -0.47
VTA1-205ENST00000620996 ANO2Q9NQ90 1003 aa12.13□□□□□ -0.47
VTA1-205ENST00000620996 REC8O95072 547 aa12.13□□□□□ -0.47
VTA1-205ENST00000620996 RBM25P49756 843 aaKnown RBP12.13□□□□□ -0.47
VTA1-205ENST00000620996 ERBB4Q15303 1308 aa12.13□□□□□ -0.47
VTA1-205ENST00000620996 MTX1Q13505 466 aa12.13□□□□□ -0.47
VTA1-205ENST00000620996 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
VTA1-205ENST00000620996 SPATA31A1Q5TZJ5 1347 aa12.13□□□□□ -0.47
VTA1-205ENST00000620996 GPTP24298 496 aa12.12□□□□□ -0.47
VTA1-205ENST00000620996 LMBR1LQ6UX01 489 aa12.12□□□□□ -0.47
VTA1-205ENST00000620996 KCPQ6ZWJ8 1503 aa12.12□□□□□ -0.47
VTA1-205ENST00000620996 N4BP2Q86UW6 1770 aaPredicted RBP12.12□□□□□ -0.47
VTA1-205ENST00000620996 TEX13AQ9BXU3 409 aaPredicted RBP12.12□□□□□ -0.47
VTA1-205ENST00000620996 SALL3Q9BXA9 1300 aa12.12□□□□□ -0.47
VTA1-205ENST00000620996 COL16A1Q07092 1604 aaPredicted RBP12.11□□□□□ -0.47
VTA1-205ENST00000620996 CNTROBQ8N137 903 aa12.11□□□□□ -0.47
VTA1-205ENST00000620996 UTYO14607 1347 aa12.11□□□□□ -0.47
VTA1-205ENST00000620996 STAP2Q9UGK3 403 aa12.11□□□□□ -0.47
VTA1-205ENST00000620996 USP26Q9BXU7 913 aa12.1□□□□□ -0.47
VTA1-205ENST00000620996 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
VTA1-205ENST00000620996 SASH1O94885 1247 aa12.1□□□□□ -0.47
VTA1-205ENST00000620996 MEX3CQ5U5Q3 659 aaKnown RBP12.1□□□□□ -0.47
VTA1-205ENST00000620996 ECHDC1Q9NTX5 307 aa12.1□□□□□ -0.47
VTA1-205ENST00000620996 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
VTA1-205ENST00000620996 SHANK3Q9BYB0 1731 aa12.1□□□□□ -0.47
VTA1-205ENST00000620996 CHMLP26374 656 aa12.1□□□□□ -0.47
VTA1-205ENST00000620996 ESYT1Q9BSJ8 1104 aa12.1□□□□□ -0.47
VTA1-205ENST00000620996 CDCA7Q9BWT1 371 aaPredicted RBP12.1□□□□□ -0.47
VTA1-205ENST00000620996 TLR7Q9NYK1 1049 aaKnown RBP12.1□□□□□ -0.47
VTA1-205ENST00000620996 TBC1D2BQ9UPU7 963 aa12.1□□□□□ -0.47
VTA1-205ENST00000620996 ZBTB1Q9Y2K1 713 aa12.1□□□□□ -0.47
VTA1-205ENST00000620996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.1□□□□□ -0.47
VTA1-205ENST00000620996 GLRX3O76003 335 aaKnown RBP12.09□□□□□ -0.47
VTA1-205ENST00000620996 NFKBIBQ15653 356 aa12.09□□□□□ -0.47
VTA1-205ENST00000620996 MARCH10Q8NA82 808 aaPredicted RBP12.09□□□□□ -0.47
VTA1-205ENST00000620996 PI4K2BQ8TCG2 481 aa12.09□□□□□ -0.47
VTA1-205ENST00000620996 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
VTA1-205ENST00000620996 CWC27Q6UX04 472 aaKnown RBP12.09□□□□□ -0.47
VTA1-205ENST00000620996 EAF2Q96CJ1 260 aaPredicted RBP12.09□□□□□ -0.47
VTA1-205ENST00000620996 BOLA2Q9H3K6 86 aa12.09□□□□□ -0.47
VTA1-205ENST00000620996 DIAPH3Q9NSV4 1193 aa12.09□□□□□ -0.47
VTA1-205ENST00000620996 TNS2Q63HR2 1409 aa12.09□□□□□ -0.47
VTA1-205ENST00000620996 MCCP23508 829 aa12.08□□□□□ -0.47
VTA1-205ENST00000620996 ATP6V1AP38606 617 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms