RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 MED23Q9ULK4 1368 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 NUP188Q5SRE5 1749 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 MST1RQ04912 1400 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 ARFGEF2Q9Y6D5 1785 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 STX6O43752 255 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 HOXB7P09629 217 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 NOLC1Q14978 699 aaKnown RBP eCLIP9.58□□□□□ -0.88
CHD7-212ENST00000618450 ANO2Q9NQ90 1003 aa9.58□□□□□ -0.88
CHD7-212ENST00000618450 COL18A1P39060 1754 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 ELP1O95163 1332 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 TTC41PQ6P2S7 1318 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 VPS53Q5VIR6 699 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 TAF6LQ9Y6J9 622 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 ADCY5O95622 1261 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 TSGA10IPQ3SY00 556 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 SLC4A10Q6U841 1118 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 SMAP1Q8IYB5 467 aaPredicted RBP9.57□□□□□ -0.88
CHD7-212ENST00000618450 PRIMPOLQ96LW4 560 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 LIMCH1Q9UPQ0 1083 aa9.57□□□□□ -0.88
CHD7-212ENST00000618450 NCLP19338 710 aaKnown RBP9.57□□□□□ -0.88
CHD7-212ENST00000618450 TAF7Q15545 349 aaPredicted RBP9.57□□□□□ -0.88
CHD7-212ENST00000618450 FOXD4L5Q5VV16 416 aaPredicted RBP9.57□□□□□ -0.88
CHD7-212ENST00000618450 FOXD4L4Q8WXT5 416 aaPredicted RBP9.57□□□□□ -0.88
CHD7-212ENST00000618450 ZNF830Q96NB3 372 aaPredicted RBP9.57□□□□□ -0.88
CHD7-212ENST00000618450 CPA1P15085 419 aa9.56□□□□□ -0.88
CHD7-212ENST00000618450 ME3Q16798 604 aa9.56□□□□□ -0.88
CHD7-212ENST00000618450 MAP4K1Q92918 833 aa9.56□□□□□ -0.88
CHD7-212ENST00000618450 IL1RAPL2Q9NP60 686 aa9.56□□□□□ -0.88
CHD7-212ENST00000618450 C17orf53Q8N3J3 647 aaPredicted RBP9.56□□□□□ -0.88
CHD7-212ENST00000618450 USP25Q9UHP3 1055 aa9.56□□□□□ -0.88
CHD7-212ENST00000618450 HCLS1P14317 486 aaPredicted RBP9.56□□□□□ -0.88
CHD7-212ENST00000618450 LRP10Q7Z4F1 713 aa9.56□□□□□ -0.88
CHD7-212ENST00000618450 TTC12Q9H892 705 aaPredicted RBP9.56□□□□□ -0.88
CHD7-212ENST00000618450 PYCARDQ9ULZ3 195 aa9.56□□□□□ -0.88
CHD7-212ENST00000618450 FER1L4A9Z1Z3 1794 aa9.56□□□□□ -0.88
CHD7-212ENST00000618450 FAM69CQ0P6D2 419 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 KIAA2012Q0VF49 1180 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 GLIPR1L2Q4G1C9 344 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 TPCN1Q9ULQ1 816 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 ALS2Q96Q42 1657 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 USPL1Q5W0Q7 1092 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 CCDC94Q9BW85 323 aaPredicted RBP9.55□□□□□ -0.88
CHD7-212ENST00000618450 TBX22Q9Y458 520 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 ZNF142P52746 1687 aaPredicted RBP9.55□□□□□ -0.88
CHD7-212ENST00000618450 AFDNP55196 1824 aaKnown RBP9.55□□□□□ -0.88
CHD7-212ENST00000618450 PDIA6Q15084 440 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 TSC1Q92574 1164 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 FAM53CQ9NYF3 392 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 LAMB4A4D0S4 1761 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 SASH1O94885 1247 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 TOB2Q14106 344 aaPredicted RBP9.55□□□□□ -0.88
CHD7-212ENST00000618450 TTC6Q86TZ1 520 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 PLA2G4DQ86XP0 818 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 RILPL2Q969X0 211 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 KIF1BPQ96EK5 621 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 MRVI1Q9Y6F6 885 aa9.55□□□□□ -0.88
CHD7-212ENST00000618450 UBR2Q8IWV8 1755 aa9.54□□□□□ -0.88
CHD7-212ENST00000618450 KCNQ3O43525 872 aa9.54□□□□□ -0.88
CHD7-212ENST00000618450 ATP2B3Q16720 1220 aa9.54□□□□□ -0.88
CHD7-212ENST00000618450 ECM29Q5VYK3 1845 aa9.54□□□□□ -0.88
CHD7-212ENST00000618450 PKD1L3Q7Z443 1732 aa9.54□□□□□ -0.88
CHD7-212ENST00000618450 MTERF4Q7Z6M4 381 aaKnown RBP9.54□□□□□ -0.88
CHD7-212ENST00000618450 ADAMTSL3P82987 1691 aa9.54□□□□□ -0.88
CHD7-212ENST00000618450 NEDD4P46934 1319 aa9.54□□□□□ -0.88
CHD7-212ENST00000618450 LETM1O95202 739 aaPredicted RBP9.54□□□□□ -0.88
CHD7-212ENST00000618450 ADD1P35611 737 aaKnown RBP9.54□□□□□ -0.88
CHD7-212ENST00000618450 DNM1Q05193 864 aaKnown RBP9.54□□□□□ -0.88
CHD7-212ENST00000618450 UTP14CQ5TAP6 766 aaKnown RBP9.54□□□□□ -0.88
CHD7-212ENST00000618450 LGR6Q9HBX8 967 aa9.54□□□□□ -0.88
CHD7-212ENST00000618450 STAG3Q9UJ98 1225 aa9.54□□□□□ -0.88
CHD7-212ENST00000618450 ANP32BQ92688 251 aaKnown RBP9.54□□□□□ -0.88
CHD7-212ENST00000618450 PARP4Q9UKK3 1724 aaKnown RBP9.54□□□□□ -0.88
CHD7-212ENST00000618450 ERBB3P21860 1342 aa9.53□□□□□ -0.88
CHD7-212ENST00000618450 MAP4K4O95819 1239 aaPredicted RBP9.53□□□□□ -0.88
CHD7-212ENST00000618450 FAM13BQ9NYF5 915 aa9.53□□□□□ -0.88
CHD7-212ENST00000618450 C4AP0C0L4 1744 aa9.53□□□□□ -0.88
CHD7-212ENST00000618450 C4BP0C0L5 1744 aa9.53□□□□□ -0.88
CHD7-212ENST00000618450 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
CHD7-212ENST00000618450 SPG7Q9UQ90 795 aa9.53□□□□□ -0.88
CHD7-212ENST00000618450 UBTFL1P0CB47 393 aaPredicted RBP9.53□□□□□ -0.88
CHD7-212ENST00000618450 MCCP23508 829 aa9.53□□□□□ -0.88
CHD7-212ENST00000618450 GIMAP6Q6P9H5 292 aa9.53□□□□□ -0.88
CHD7-212ENST00000618450 PAPPAQ13219 1627 aa9.53□□□□□ -0.88
CHD7-212ENST00000618450 GIGYF1O75420 1035 aaPredicted RBP9.52□□□□□ -0.88
CHD7-212ENST00000618450 PHF14O94880 888 aa9.52□□□□□ -0.88
CHD7-212ENST00000618450 GJB2P29033 226 aa9.52□□□□□ -0.88
CHD7-212ENST00000618450 DMTNQ08495 405 aa9.52□□□□□ -0.88
CHD7-212ENST00000618450 DTNBO60941 627 aa9.52□□□□□ -0.89
CHD7-212ENST00000618450 SYAP1Q96A49 352 aaPredicted RBP9.52□□□□□ -0.89
CHD7-212ENST00000618450 AMOTL2Q9Y2J4 779 aa9.52□□□□□ -0.89
CHD7-212ENST00000618450 TRIM6-TRIM34B2RNG4 842 aa9.52□□□□□ -0.89
CHD7-212ENST00000618450 LIG1P18858 919 aa9.52□□□□□ -0.89
CHD7-212ENST00000618450 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
CHD7-212ENST00000618450 KCND1Q9NSA2 647 aa9.52□□□□□ -0.89
CHD7-212ENST00000618450 CHPF2Q9P2E5 772 aa9.52□□□□□ -0.89
CHD7-212ENST00000618450 NBPF6Q5VWK0 638 aa9.51□□□□□ -0.89
CHD7-212ENST00000618450 NBPF4Q96M43 638 aa9.51□□□□□ -0.89
CHD7-212ENST00000618450 STK31Q9BXU1 1019 aa9.51□□□□□ -0.89
CHD7-212ENST00000618450 CDC37L1Q7L3B6 337 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms