RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 GPATCH11Q8N954 259 aa6.71□□□□□ -1.34
CPNE4-214ENST00000617767 PPP1R9BQ96SB3 815 aa6.71□□□□□ -1.34
CPNE4-214ENST00000617767 MYCBPQ99417 103 aaPredicted RBP6.71□□□□□ -1.34
CPNE4-214ENST00000617767 PRDM16Q9HAZ2 1276 aa6.71□□□□□ -1.34
CPNE4-214ENST00000617767 C1orf167Q5SNV9 1468 aa6.71□□□□□ -1.34
CPNE4-214ENST00000617767 UTRNP46939 3433 aa6.71□□□□□ -1.34
CPNE4-214ENST00000617767 ERICH4A6NGS2 130 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 CWF19L2Q2TBE0 894 aaKnown RBP6.7□□□□□ -1.34
CPNE4-214ENST00000617767 HSP90AB3PQ58FF7 597 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 EFCC1Q9HA90 598 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 PRDM11Q9NQV5 511 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 ISY1Q9ULR0 285 aaKnown RBP6.7□□□□□ -1.34
CPNE4-214ENST00000617767 CEP83Q9Y592 693 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 RGPD1P0DJD0 1748 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 NBPF7P0C2Y1 421 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-214ENST00000617767 CSPP1Q1MSJ5 1256 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 INTS3Q68E01 1043 aaKnown RBP6.7□□□□□ -1.34
CPNE4-214ENST00000617767 KIAA0232Q92628 1395 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 KDM4FA0A1W2PPD8 638 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 NASPP49321 788 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-214ENST00000617767 NBPF20Q3BBV1 942 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 TBC1D9Q6ZT07 1266 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 TOM1L2Q6ZVM7 507 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 NUTM1Q86Y26 1132 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 FEZ2Q9UHY8 353 aaPredicted RBP6.7□□□□□ -1.34
CPNE4-214ENST00000617767 RTL1A6NKG5 1358 aa6.7□□□□□ -1.34
CPNE4-214ENST00000617767 RGS12O14924 1447 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 RNMTO43148 476 aaKnown RBP6.69□□□□□ -1.34
CPNE4-214ENST00000617767 PTCD1O75127 700 aaKnown RBP6.69□□□□□ -1.34
CPNE4-214ENST00000617767 GSPT1P15170 499 aaKnown RBP6.69□□□□□ -1.34
CPNE4-214ENST00000617767 EIF4A1P60842 406 aaKnown RBP6.69□□□□□ -1.34
CPNE4-214ENST00000617767 NOL8Q76FK4 1167 aaKnown RBP6.69□□□□□ -1.34
CPNE4-214ENST00000617767 PDCL2Q8N4E4 241 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 RILPL2Q969X0 211 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 PSMD1Q99460 953 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 RSPH14Q9UHP6 348 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 ZBTB12Q9Y330 459 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-214ENST00000617767 ERBB3P21860 1342 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 SATB1Q01826 763 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 MYRIPQ8NFW9 859 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 GCC1Q96CN9 775 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 TBC1D32Q96NH3 1257 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 TBC1D2Q9BYX2 928 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 TSPYL1Q9H0U9 437 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 TOMM22Q9NS69 142 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 NWD1Q149M9 1564 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 STRCP1A6NGW2 1772 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 GNAI2P04899 355 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 UBTFL1P0CB47 393 aaPredicted RBP6.69□□□□□ -1.34
CPNE4-214ENST00000617767 AKAP4Q5JQC9 854 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 CADPS2Q86UW7 1296 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 PLEKHM2Q8IWE5 1019 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 ANKRD44Q8N8A2 993 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 SIL1Q9H173 461 aa6.69□□□□□ -1.34
CPNE4-214ENST00000617767 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.69□□□□□ -1.34
CPNE4-214ENST00000617767 BRPF1P55201 1214 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-214ENST00000617767 DNAJC21Q5F1R6 531 aaKnown RBP6.68□□□□□ -1.34
CPNE4-214ENST00000617767 BRINP3Q76B58 766 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 NOL7Q9UMY1 257 aaKnown RBP6.68□□□□□ -1.34
CPNE4-214ENST00000617767 MAP3K2Q9Y2U5 619 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 PTPRCP08575 1304 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 SRGAP3O43295 1099 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 DTNBO60941 627 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 SURF6O75683 361 aaKnown RBP6.68□□□□□ -1.34
CPNE4-214ENST00000617767 SLFN14P0C7P3 912 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 CCDC172P0C7W6 258 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 CEP120Q8N960 986 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 KLHDC4Q8TBB5 520 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 NCAPGQ9BPX3 1015 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 DCTPP1Q9H773 170 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 CALCOCO1Q9P1Z2 691 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 PA2G4Q9UQ80 394 aaKnown RBP6.68□□□□□ -1.34
CPNE4-214ENST00000617767 NFAT5O94916 1531 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 SRCAPQ6ZRS2 3230 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 ZNF142P52746 1687 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-214ENST00000617767 AK9Q5TCS8 1911 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 TATP17735 454 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-214ENST00000617767 EVA1CP58658 441 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 MAP2K1Q02750 393 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-214ENST00000617767 USP44Q9H0E7 712 aa6.68□□□□□ -1.34
CPNE4-214ENST00000617767 C9orf78Q9NZ63 289 aaPredicted RBP6.68□□□□□ -1.34
CPNE4-214ENST00000617767 ATP5J2-PTCD1G3V325 749 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 CCT4P50991 539 aaKnown RBP6.67□□□□□ -1.34
CPNE4-214ENST00000617767 PPP1R42Q7Z4L9 355 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 SYTL4Q96C24 671 aaPredicted RBP6.67□□□□□ -1.34
CPNE4-214ENST00000617767 SRCIN1Q9C0H9 1055 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 SLAIN2Q9P270 581 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 NPHP3Q7Z494 1330 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 CD2BP2O95400 341 aaKnown RBP6.67□□□□□ -1.34
CPNE4-214ENST00000617767 ZNF496Q96IT1 587 aaPredicted RBP6.67□□□□□ -1.34
CPNE4-214ENST00000617767 USP16Q9Y5T5 823 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 ATP10DQ9P241 1426 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 CYP27B1O15528 508 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 SDSP20132 328 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 DNAAF4Q8WXU2 420 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 SGSM3Q96HU1 749 aa6.67□□□□□ -1.34
CPNE4-214ENST00000617767 VIRMAQ69YN4 1812 aaKnown RBP6.67□□□□□ -1.34
CPNE4-214ENST00000617767 MST1RQ04912 1400 aa6.66□□□□□ -1.34
CPNE4-214ENST00000617767 HMMRO75330 724 aa6.66□□□□□ -1.34
CPNE4-214ENST00000617767 NOP2P46087 812 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms