RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 NEURL1BA8MQ27 555 aa25.63■■□□□ 1.69
CNTNAP3B-212ENST00000617422 HSPA1LP34931 641 aa25.63■■□□□ 1.69
CNTNAP3B-212ENST00000617422 TTLL7Q6ZT98 887 aa25.63■■□□□ 1.69
CNTNAP3B-212ENST00000617422 FNBP4Q8N3X1 1017 aaPredicted RBP25.63■■□□□ 1.69
CNTNAP3B-212ENST00000617422 C9orf78Q9NZ63 289 aaPredicted RBP25.63■■□□□ 1.69
CNTNAP3B-212ENST00000617422 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.62■■□□□ 1.69
CNTNAP3B-212ENST00000617422 POLA2Q14181 598 aa25.62■■□□□ 1.69
CNTNAP3B-212ENST00000617422 KAZALD1Q96I82 304 aa25.62■■□□□ 1.69
CNTNAP3B-212ENST00000617422 FAM98CQ17RN3 349 aaKnown RBP25.62■■□□□ 1.69
CNTNAP3B-212ENST00000617422 RBM42Q9BTD8 480 aaKnown RBP25.62■■□□□ 1.69
CNTNAP3B-212ENST00000617422 UTYO14607 1347 aa25.62■■□□□ 1.69
CNTNAP3B-212ENST00000617422 GRM8O00222 908 aa25.61■■□□□ 1.69
CNTNAP3B-212ENST00000617422 VPS72Q15906 364 aa25.61■■□□□ 1.69
CNTNAP3B-212ENST00000617422 NUP188Q5SRE5 1749 aa25.61■■□□□ 1.69
CNTNAP3B-212ENST00000617422 SPATA31A6Q5VVP1 1343 aa25.61■■□□□ 1.69
CNTNAP3B-212ENST00000617422 IBTKQ9P2D0 1353 aaPredicted RBP25.6■■□□□ 1.69
CNTNAP3B-212ENST00000617422 VSIG10Q8N0Z9 540 aa25.6■■□□□ 1.69
CNTNAP3B-212ENST00000617422 AFDNP55196 1824 aaKnown RBP25.6■■□□□ 1.69
CNTNAP3B-212ENST00000617422 SRGAP3O43295 1099 aa25.59■■□□□ 1.69
CNTNAP3B-212ENST00000617422 GCKRQ14397 625 aa25.59■■□□□ 1.69
CNTNAP3B-212ENST00000617422 PLBD2Q8NHP8 589 aa25.59■■□□□ 1.69
CNTNAP3B-212ENST00000617422 ACSBG1Q96GR2 724 aa25.59■■□□□ 1.69
CNTNAP3B-212ENST00000617422 SUCLG2Q96I99 432 aa25.59■■□□□ 1.69
CNTNAP3B-212ENST00000617422 BMP2KLQ5H9B9 411 aa25.58■■□□□ 1.69
CNTNAP3B-212ENST00000617422 ATP5J2-PTCD1G3V325 749 aa25.58■■□□□ 1.68
CNTNAP3B-212ENST00000617422 NEXNQ0ZGT2 675 aa25.58■■□□□ 1.68
CNTNAP3B-212ENST00000617422 GSPT1P15170 499 aaKnown RBP25.57■■□□□ 1.68
CNTNAP3B-212ENST00000617422 MTX1Q13505 466 aa25.56■■□□□ 1.68
CNTNAP3B-212ENST00000617422 JARID2Q92833 1246 aaPredicted RBP25.56■■□□□ 1.68
CNTNAP3B-212ENST00000617422 TJP1Q07157 1748 aa25.56■■□□□ 1.68
CNTNAP3B-212ENST00000617422 USP21Q9UK80 565 aa25.55■■□□□ 1.68
CNTNAP3B-212ENST00000617422 BICC1Q9H694 974 aaKnown RBP25.55■■□□□ 1.68
CNTNAP3B-212ENST00000617422 ZBTB3Q9H5J0 574 aa25.54■■□□□ 1.68
CNTNAP3B-212ENST00000617422 TEX13AQ9BXU3 409 aaPredicted RBP25.54■■□□□ 1.68
CNTNAP3B-212ENST00000617422 LRRCC1Q9C099 1032 aa25.54■■□□□ 1.68
CNTNAP3B-212ENST00000617422 SURF6O75683 361 aaKnown RBP25.53■■□□□ 1.68
CNTNAP3B-212ENST00000617422 EPHA10Q5JZY3 1008 aa25.53■■□□□ 1.68
CNTNAP3B-212ENST00000617422 SALL3Q9BXA9 1300 aa25.52■■□□□ 1.68
CNTNAP3B-212ENST00000617422 A0A0G2JS52 829 aa25.52■■□□□ 1.68
CNTNAP3B-212ENST00000617422 CYP19A1P11511 503 aaPredicted RBP25.52■■□□□ 1.68
CNTNAP3B-212ENST00000617422 KCNQ2O43526 872 aa25.52■■□□□ 1.68
CNTNAP3B-212ENST00000617422 TTC22Q5TAA0 569 aa25.51■■□□□ 1.67
CNTNAP3B-212ENST00000617422 STARD3NLO95772 234 aa25.51■■□□□ 1.67
CNTNAP3B-212ENST00000617422 ZNF330Q9Y3S2 320 aaPredicted RBP25.51■■□□□ 1.67
CNTNAP3B-212ENST00000617422 CASP7P55210 303 aa25.49■■□□□ 1.67
CNTNAP3B-212ENST00000617422 IL1RAPL2Q9NP60 686 aa25.49■■□□□ 1.67
CNTNAP3B-212ENST00000617422 PA2G4Q9UQ80 394 aaKnown RBP25.49■■□□□ 1.67
CNTNAP3B-212ENST00000617422 TSHZ3Q63HK5 1081 aa25.49■■□□□ 1.67
CNTNAP3B-212ENST00000617422 UBE3BQ7Z3V4 1068 aa25.49■■□□□ 1.67
CNTNAP3B-212ENST00000617422 ZBTB1Q9Y2K1 713 aa25.48■■□□□ 1.67
CNTNAP3B-212ENST00000617422 THSD7AQ9UPZ6 1657 aa25.48■■□□□ 1.67
CNTNAP3B-212ENST00000617422 PDE1AP54750 535 aa25.48■■□□□ 1.67
CNTNAP3B-212ENST00000617422 A0A087WZG4 1122 aa25.47■■□□□ 1.67
CNTNAP3B-212ENST00000617422 RHPN1Q8TCX5 695 aa25.46■■□□□ 1.67
CNTNAP3B-212ENST00000617422 PTF1AQ7RTS3 328 aa25.46■■□□□ 1.67
CNTNAP3B-212ENST00000617422 OSBPL3Q9H4L5 887 aa25.46■■□□□ 1.67
CNTNAP3B-212ENST00000617422 HDAC5Q9UQL6 1122 aa25.46■■□□□ 1.67
CNTNAP3B-212ENST00000617422 RAB11FIP3O75154 756 aa25.45■■□□□ 1.67
CNTNAP3B-212ENST00000617422 MEX3CQ5U5Q3 659 aaKnown RBP25.45■■□□□ 1.67
CNTNAP3B-212ENST00000617422 TUBGCP6Q96RT7 1819 aa25.45■■□□□ 1.67
CNTNAP3B-212ENST00000617422 TBC1D9Q6ZT07 1266 aa25.45■■□□□ 1.66
CNTNAP3B-212ENST00000617422 AFF2P51816 1311 aa25.45■■□□□ 1.66
CNTNAP3B-212ENST00000617422 H7C1W4 665 aa25.44■■□□□ 1.66
CNTNAP3B-212ENST00000617422 MFAP1P55081 439 aaKnown RBP25.44■■□□□ 1.66
CNTNAP3B-212ENST00000617422 KLHDC4Q8TBB5 520 aa25.44■■□□□ 1.66
CNTNAP3B-212ENST00000617422 SDSP20132 328 aa25.43■■□□□ 1.66
CNTNAP3B-212ENST00000617422 ITPK1Q13572 414 aa25.43■■□□□ 1.66
CNTNAP3B-212ENST00000617422 TBC1D32Q96NH3 1257 aa25.43■■□□□ 1.66
CNTNAP3B-212ENST00000617422 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.43■■□□□ 1.66
CNTNAP3B-212ENST00000617422 LOC102724428A0A0B4J2F2 783 aa25.42■■□□□ 1.66
CNTNAP3B-212ENST00000617422 MX1P20591 662 aa25.42■■□□□ 1.66
CNTNAP3B-212ENST00000617422 SIK1P57059 783 aa25.42■■□□□ 1.66
CNTNAP3B-212ENST00000617422 ISCA1Q9BUE6 129 aa25.42■■□□□ 1.66
CNTNAP3B-212ENST00000617422 CWC25Q9NXE8 425 aaPredicted RBP25.42■■□□□ 1.66
CNTNAP3B-212ENST00000617422 COL15A1P39059 1388 aa25.42■■□□□ 1.66
CNTNAP3B-212ENST00000617422 FAM182BQ5T319 152 aa25.42■■□□□ 1.66
CNTNAP3B-212ENST00000617422 NUTM1Q86Y26 1132 aa25.42■■□□□ 1.66
CNTNAP3B-212ENST00000617422 KIF1BPQ96EK5 621 aa25.42■■□□□ 1.66
CNTNAP3B-212ENST00000617422 PALLDQ8WX93 1383 aa25.42■■□□□ 1.66
CNTNAP3B-212ENST00000617422 TCIRG1Q13488 830 aa25.41■■□□□ 1.66
CNTNAP3B-212ENST00000617422 HLFQ16534 295 aa25.41■■□□□ 1.66
CNTNAP3B-212ENST00000617422 RABL6Q3YEC7 729 aaPredicted RBP25.41■■□□□ 1.66
CNTNAP3B-212ENST00000617422 MYH14Q7Z406 1995 aaKnown RBP25.41■■□□□ 1.66
CNTNAP3B-212ENST00000617422 ATP6V1AP38606 617 aa25.41■■□□□ 1.66
CNTNAP3B-212ENST00000617422 INTS5Q6P9B9 1019 aaKnown RBP25.41■■□□□ 1.66
CNTNAP3B-212ENST00000617422 GJD4Q96KN9 370 aaPredicted RBP25.41■■□□□ 1.66
CNTNAP3B-212ENST00000617422 MAP3K15Q6ZN16 1313 aa25.4■■□□□ 1.66
CNTNAP3B-212ENST00000617422 CCDC191Q8NCU4 936 aa25.4■■□□□ 1.66
CNTNAP3B-212ENST00000617422 STAP2Q9UGK3 403 aa25.4■■□□□ 1.66
CNTNAP3B-212ENST00000617422 KIF6Q6ZMV9 814 aa25.39■■□□□ 1.66
CNTNAP3B-212ENST00000617422 ARXQ96QS3 562 aa25.39■■□□□ 1.66
CNTNAP3B-212ENST00000617422 CICQ96RK0 1608 aaPredicted RBP25.39■■□□□ 1.65
CNTNAP3B-212ENST00000617422 RFX5P48382 616 aaPredicted RBP25.39■■□□□ 1.65
CNTNAP3B-212ENST00000617422 FOXO4P98177 505 aa25.39■■□□□ 1.65
CNTNAP3B-212ENST00000617422 CDC45O75419 566 aa25.38■■□□□ 1.65
CNTNAP3B-212ENST00000617422 SASH1O94885 1247 aa25.38■■□□□ 1.65
CNTNAP3B-212ENST00000617422 OS9Q13438 667 aaPredicted RBP25.38■■□□□ 1.65
CNTNAP3B-212ENST00000617422 HSP90AB4PQ58FF6 505 aa25.38■■□□□ 1.65
CNTNAP3B-212ENST00000617422 DAXXQ9UER7 740 aaPredicted RBP25.38■■□□□ 1.65
CNTNAP3B-212ENST00000617422 RREB1Q92766 1687 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms