RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 PODXL2Q9NZ53 605 aa21.66■■□□□ 1.06
GABPB1-212ENST00000615671 CCDC196A0A1B0GTZ2 297 aa21.65■■□□□ 1.06
GABPB1-212ENST00000615671 MICU3Q86XE3 530 aa21.65■■□□□ 1.06
GABPB1-212ENST00000615671 RAB34Q9BZG1 259 aa21.65■■□□□ 1.06
GABPB1-212ENST00000615671 PLEKHH2Q8IVE3 1493 aa21.65■■□□□ 1.06
GABPB1-212ENST00000615671 LUZP1Q86V48 1076 aa21.64■■□□□ 1.06
GABPB1-212ENST00000615671 HLA-DOAP06340 250 aa21.64■■□□□ 1.05
GABPB1-212ENST00000615671 FBLN1P23142 703 aa21.64■■□□□ 1.05
GABPB1-212ENST00000615671 MTIF2P46199 727 aaKnown RBP21.64■■□□□ 1.05
GABPB1-212ENST00000615671 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.05
GABPB1-212ENST00000615671 RPGRIP1LQ68CZ1 1315 aa21.64■■□□□ 1.05
GABPB1-212ENST00000615671 FAM83GA6ND36 823 aa21.64■■□□□ 1.05
GABPB1-212ENST00000615671 CCDC40Q4G0X9 1142 aa21.64■■□□□ 1.05
GABPB1-212ENST00000615671 TMCO5BA8MYB1 307 aa21.63■■□□□ 1.05
GABPB1-212ENST00000615671 SSH1Q8WYL5 1049 aa21.63■■□□□ 1.05
GABPB1-212ENST00000615671 IFFO1Q0D2I5 559 aa21.63■■□□□ 1.05
GABPB1-212ENST00000615671 HYPKQ9NX55 129 aa21.63■■□□□ 1.05
GABPB1-212ENST00000615671 CWC25Q9NXE8 425 aaPredicted RBP21.63■■□□□ 1.05
GABPB1-212ENST00000615671 EPRSP07814 1512 aaKnown RBP21.63■■□□□ 1.05
GABPB1-212ENST00000615671 CCDC66A2RUB6 948 aa21.63■■□□□ 1.05
GABPB1-212ENST00000615671 ATP6V1AP38606 617 aa21.63■■□□□ 1.05
GABPB1-212ENST00000615671 TERF1P54274 439 aa21.63■■□□□ 1.05
GABPB1-212ENST00000615671 CDC5LQ99459 802 aaKnown RBP21.63■■□□□ 1.05
GABPB1-212ENST00000615671 UBE3BQ7Z3V4 1068 aa21.63■■□□□ 1.05
GABPB1-212ENST00000615671 SLC26A6Q9BXS9 759 aa21.63■■□□□ 1.05
GABPB1-212ENST00000615671 KIF20AO95235 890 aa21.62■■□□□ 1.05
GABPB1-212ENST00000615671 CALML4Q96GE6 196 aa21.62■■□□□ 1.05
GABPB1-212ENST00000615671 EHBP1L1Q8N3D4 1523 aa21.62■■□□□ 1.05
GABPB1-212ENST00000615671 TOP1P11387 765 aaKnown RBP21.62■■□□□ 1.05
GABPB1-212ENST00000615671 MAPK8IP2Q13387 824 aaPredicted RBP21.62■■□□□ 1.05
GABPB1-212ENST00000615671 DPH6Q7L8W6 267 aa21.62■■□□□ 1.05
GABPB1-212ENST00000615671 C16orf71Q8IYS4 520 aaPredicted RBP21.62■■□□□ 1.05
GABPB1-212ENST00000615671 RNF41Q9H4P4 317 aaPredicted RBP21.62■■□□□ 1.05
GABPB1-212ENST00000615671 TRMT1Q9NXH9 659 aaKnown RBP21.62■■□□□ 1.05
GABPB1-212ENST00000615671 VPS36Q86VN1 386 aa21.62■■□□□ 1.05
GABPB1-212ENST00000615671 ANKRD24Q8TF21 1146 aa21.62■■□□□ 1.05
GABPB1-212ENST00000615671 GDPD2Q9HCC8 539 aa21.62■■□□□ 1.05
GABPB1-212ENST00000615671 VEZTQ9HBM0 779 aa21.61■■□□□ 1.05
GABPB1-212ENST00000615671 TFIP11Q9UBB9 837 aaKnown RBP21.61■■□□□ 1.05
GABPB1-212ENST00000615671 CDK13Q14004 1512 aaKnown RBP21.61■■□□□ 1.05
GABPB1-212ENST00000615671 PPP1R42Q7Z4L9 355 aa21.61■■□□□ 1.05
GABPB1-212ENST00000615671 SLFN5Q08AF3 891 aa21.61■■□□□ 1.05
GABPB1-212ENST00000615671 RGS22Q8NE09 1264 aa21.61■■□□□ 1.05
GABPB1-212ENST00000615671 MAP3K9P80192 1104 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 IL27Q8NEV9 243 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 UBAP1LF5GYI3 381 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 STX8Q9UNK0 236 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 BAG3O95817 575 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 PUS7Q96PZ0 661 aaKnown RBP21.6■■□□□ 1.05
GABPB1-212ENST00000615671 SERPINA10Q9UK55 444 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 HOOK3Q86VS8 718 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 DAPK1P53355 1430 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 HECW1Q76N89 1606 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 PDE4BQ07343 736 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 KIF4BQ2VIQ3 1234 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 MFSD6Q6ZSS7 791 aa21.6■■□□□ 1.05
GABPB1-212ENST00000615671 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
GABPB1-212ENST00000615671 LMAN1P49257 510 aa21.59■■□□□ 1.05
GABPB1-212ENST00000615671 C20orf194Q5TEA3 1177 aa21.59■■□□□ 1.05
GABPB1-212ENST00000615671 BACH2Q9BYV9 841 aa21.59■■□□□ 1.05
GABPB1-212ENST00000615671 FSIP1Q8NA03 581 aa21.59■■□□□ 1.05
GABPB1-212ENST00000615671 JAG2Q9Y219 1238 aa21.59■■□□□ 1.05
GABPB1-212ENST00000615671 KIF5CO60282 957 aa21.59■■□□□ 1.05
GABPB1-212ENST00000615671 TSPY3P0CV98 308 aa21.59■■□□□ 1.05
GABPB1-212ENST00000615671 TSPY8P0CW00 308 aa21.59■■□□□ 1.05
GABPB1-212ENST00000615671 USP16Q9Y5T5 823 aa21.59■■□□□ 1.05
GABPB1-212ENST00000615671 URI1O94763 535 aaPredicted RBP21.58■■□□□ 1.05
GABPB1-212ENST00000615671 DBF4Q9UBU7 674 aaPredicted RBP21.58■■□□□ 1.05
GABPB1-212ENST00000615671 NOP2P46087 812 aaKnown RBP21.58■■□□□ 1.05
GABPB1-212ENST00000615671 CRACR2AQ9BSW2 395 aa21.58■■□□□ 1.05
GABPB1-212ENST00000615671 PHAXQ9H814 394 aaKnown RBP21.58■■□□□ 1.05
GABPB1-212ENST00000615671 RIMBP2O15034 1052 aa21.58■■□□□ 1.04
GABPB1-212ENST00000615671 SFPQP23246 707 aaKnown RBP eCLIP21.58■■□□□ 1.04
GABPB1-212ENST00000615671 ANO10Q9NW15 660 aa21.57■■□□□ 1.04
GABPB1-212ENST00000615671 GJB2P29033 226 aa21.57■■□□□ 1.04
GABPB1-212ENST00000615671 MRPS9P82933 396 aaKnown RBP21.57■■□□□ 1.04
GABPB1-212ENST00000615671 IFNL2Q8IZJ0 200 aa21.57■■□□□ 1.04
GABPB1-212ENST00000615671 FAM212AQ96EL1 285 aa21.57■■□□□ 1.04
GABPB1-212ENST00000615671 WASLO00401 505 aaPredicted RBP21.56■■□□□ 1.04
GABPB1-212ENST00000615671 HMGB2P26583 209 aaKnown RBP21.56■■□□□ 1.04
GABPB1-212ENST00000615671 METAP2P50579 478 aaKnown RBP eCLIP21.56■■□□□ 1.04
GABPB1-212ENST00000615671 LRRC2Q9BYS8 371 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 TCP11L1Q9NUJ3 509 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 CLIP2Q9UDT6 1046 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 ARAP1Q96P48 1450 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 FGFR1OPO95684 399 aaKnown RBP21.56■■□□□ 1.04
GABPB1-212ENST00000615671 FLIIQ13045 1269 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 UBXN4Q92575 508 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 AKNAD1Q5T1N1 836 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 CD109Q6YHK3 1445 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 TMCO3Q6UWJ1 677 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 SETDB2Q96T68 719 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 SLC39A6Q13433 755 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 SYNCQ9H7C4 482 aa21.56■■□□□ 1.04
GABPB1-212ENST00000615671 HEATR3Q7Z4Q2 680 aa21.55■■□□□ 1.04
GABPB1-212ENST00000615671 HSP90AA4PQ58FG1 418 aa21.55■■□□□ 1.04
GABPB1-212ENST00000615671 IARSP41252 1262 aaKnown RBP21.55■■□□□ 1.04
GABPB1-212ENST00000615671 KIF5BP33176 963 aa21.54■■□□□ 1.04
GABPB1-212ENST00000615671 MTERF4Q7Z6M4 381 aaKnown RBP21.54■■□□□ 1.04
GABPB1-212ENST00000615671 TTF1Q15361 905 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms