RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 NUP88Q99567 741 aaPredicted RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 STAMBPO95630 424 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 DNAAF4Q8WXU2 420 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 CCDC178Q5BJE1 867 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 PLB1Q6P1J6 1458 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 TEX14Q8IWB6 1497 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 CCDC171Q6TFL3 1326 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 UBE2HP62256 183 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 DYDC1Q8WWB3 177 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 ZSCAN16Q9H4T2 348 aaPredicted RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 RMND1Q9NWS8 449 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 DBF4Q9UBU7 674 aaPredicted RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 PAXBP1Q9Y5B6 917 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 NOS1P29475 1434 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 GOLIM4O00461 696 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 BAG4O95429 457 aaKnown RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 MAP2K1Q02750 393 aaPredicted RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 IFI16Q16666 785 aaKnown RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 SPTY2D1Q68D10 685 aaPredicted RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 TEX13AQ9BXU3 409 aaPredicted RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 IL1RAPL2Q9NP60 686 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 EXOC6BQ9Y2D4 811 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 DENND4BO75064 1496 aaPredicted RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 ANKRD18BA2A2Z9 1011 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 POLR3GO15318 223 aaPredicted RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 GIGYF2Q6Y7W6 1299 aaKnown RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 FEZ1Q99689 392 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 CALCOCO1Q9P1Z2 691 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 ADAMTS12P58397 1594 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 BMP15O95972 392 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 SSR1P43307 286 aaKnown RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 SYCP2Q9BX26 1530 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 ANAPC15P60006 121 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 SMC1AQ14683 1233 aaKnown RBP5.28□□□□□ -1.56
CHD9-221ENST00000615216 CALML4Q96GE6 196 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 MKNK2Q9HBH9 465 aa5.28□□□□□ -1.56
CHD9-221ENST00000615216 ZNF213O14771 459 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 IFFO1Q0D2I5 559 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 ZSCAN29Q8IWY8 852 aaPredicted RBP5.27□□□□□ -1.57
CHD9-221ENST00000615216 STK11IPQ8N1F8 1099 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 PAFAH1B1P43034 410 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 CNNM3Q8NE01 707 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 BBXQ8WY36 941 aaPredicted RBP5.27□□□□□ -1.57
CHD9-221ENST00000615216 MCM10Q7L590 875 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 PKNOX2Q96KN3 472 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 MYD88Q99836 296 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 CCDC194A0A1B0GVG4 234 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 TUBB4AP04350 444 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 CCDC172P0C7W6 258 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 TTC22Q5TAA0 569 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 CRACR2BQ8N4Y2 399 aaPredicted RBP5.27□□□□□ -1.57
CHD9-221ENST00000615216 TNPO1Q92973 898 aaKnown RBP5.27□□□□□ -1.57
CHD9-221ENST00000615216 PLCD4Q9BRC7 762 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 GTPBP4Q9BZE4 634 aaKnown RBP5.27□□□□□ -1.57
CHD9-221ENST00000615216 GOLGA8AA7E2F4 631 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 STX6O43752 255 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 PRIMPOLQ96LW4 560 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 CTAGE1Q96RT6 745 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 ANKIB1Q9P2G1 1089 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 ABCC1P33527 1531 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 DYNC1I1O14576 645 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 TUBB4BP68371 445 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 GSTO1P78417 241 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 FSIP1Q8NA03 581 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 URB2Q14146 1524 aaKnown RBP5.27□□□□□ -1.57
CHD9-221ENST00000615216 CKAP4Q07065 602 aaKnown RBP5.27□□□□□ -1.57
CHD9-221ENST00000615216 HDAC1Q13547 482 aaPredicted RBP5.27□□□□□ -1.57
CHD9-221ENST00000615216 WDR62O43379 1518 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 WASLO00401 505 aaPredicted RBP5.27□□□□□ -1.57
CHD9-221ENST00000615216 NF2P35240 595 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 GIMAP7Q8NHV1 300 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 ARHGAP45Q92619 1136 aa5.27□□□□□ -1.57
CHD9-221ENST00000615216 PDE4BQ07343 736 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 HOOK3Q86VS8 718 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 TTC12Q9H892 705 aaPredicted RBP5.26□□□□□ -1.57
CHD9-221ENST00000615216 EIF4G3O43432 1585 aaKnown RBP5.26□□□□□ -1.57
CHD9-221ENST00000615216 ECHDC1Q9NTX5 307 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 KIF4BQ2VIQ3 1234 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 TBC1D9Q6ZT07 1266 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 RPGRQ92834 1020 aaKnown RBP5.26□□□□□ -1.57
CHD9-221ENST00000615216 MPHOSPH6Q99547 160 aaKnown RBP5.26□□□□□ -1.57
CHD9-221ENST00000615216 SPINK5Q9NQ38 1064 aaPredicted RBP5.26□□□□□ -1.57
CHD9-221ENST00000615216 TCP11L1Q9NUJ3 509 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 CWC25Q9NXE8 425 aaPredicted RBP5.26□□□□□ -1.57
CHD9-221ENST00000615216 SMARCA5O60264 1052 aaPredicted RBP5.26□□□□□ -1.57
CHD9-221ENST00000615216 TRIM27P14373 513 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 NUCB1Q02818 461 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 ZNF444Q8N0Y2 327 aaPredicted RBP5.26□□□□□ -1.57
CHD9-221ENST00000615216 GJB2P29033 226 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.26□□□□□ -1.571e-6■■□□□ 13.9
CHD9-221ENST00000615216 MAPKBP1O60336 1514 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 ABCA5Q8WWZ7 1642 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 FERMT1Q9BQL6 677 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 BOLA2Q9H3K6 86 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 CCDC96Q2M329 555 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 TBC1D32Q96NH3 1257 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 CDC5LQ99459 802 aaKnown RBP5.26□□□□□ -1.57
CHD9-221ENST00000615216 TCOF1Q13428 1488 aaKnown RBP5.26□□□□□ -1.57
CHD9-221ENST00000615216 DISP3Q9P2K9 1392 aa5.26□□□□□ -1.57
CHD9-221ENST00000615216 SNW1Q13573 536 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms