RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 POLA2Q14181 598 aa20.05■□□□□ 0.8
CNOT3-208ENST00000613073 SKOR2Q2VWA4 1001 aaPredicted RBP20.05■□□□□ 0.8
CNOT3-208ENST00000613073 RILPL2Q969X0 211 aa20.05■□□□□ 0.8
CNOT3-208ENST00000613073 ADAMTS7Q9UKP4 1686 aa20.05■□□□□ 0.8
CNOT3-208ENST00000613073 TRIM6-TRIM34B2RNG4 842 aa20.05■□□□□ 0.8
CNOT3-208ENST00000613073 USP16Q9Y5T5 823 aa20.05■□□□□ 0.8
CNOT3-208ENST00000613073 SOS2Q07890 1332 aaPredicted RBP20.05■□□□□ 0.8
CNOT3-208ENST00000613073 CABP4P57796 275 aa20.04■□□□□ 0.8
CNOT3-208ENST00000613073 USP26Q9BXU7 913 aa20.04■□□□□ 0.8
CNOT3-208ENST00000613073 STRN4Q9NRL3 753 aa20.04■□□□□ 0.8
CNOT3-208ENST00000613073 RIC3Q7Z5B4 369 aa20.04■□□□□ 0.8
CNOT3-208ENST00000613073 SNX21Q969T3 373 aa20.03■□□□□ 0.8
CNOT3-208ENST00000613073 DDX58O95786 925 aaKnown RBP20.02■□□□□ 0.8
CNOT3-208ENST00000613073 RHPN1Q8TCX5 695 aa20.02■□□□□ 0.8
CNOT3-208ENST00000613073 WDR17Q8IZU2 1322 aa20.02■□□□□ 0.8
CNOT3-208ENST00000613073 COPS6Q7L5N1 327 aa20.02■□□□□ 0.8
CNOT3-208ENST00000613073 XAGE3Q8WTP9 111 aa20.02■□□□□ 0.8
CNOT3-208ENST00000613073 ALDH1L1O75891 902 aa20.01■□□□□ 0.79
CNOT3-208ENST00000613073 OS9Q13438 667 aaPredicted RBP20.01■□□□□ 0.79
CNOT3-208ENST00000613073 UNC5CLQ8IV45 518 aa20.01■□□□□ 0.79
CNOT3-208ENST00000613073 C5P01031 1676 aa20.01■□□□□ 0.79
CNOT3-208ENST00000613073 RAB11FIP3O75154 756 aa20■□□□□ 0.79
CNOT3-208ENST00000613073 MAP4K4O95819 1239 aaPredicted RBP20■□□□□ 0.79
CNOT3-208ENST00000613073 SNRPA1P09661 255 aaKnown RBP20■□□□□ 0.79
CNOT3-208ENST00000613073 LINS1Q8NG48 757 aa20■□□□□ 0.79
CNOT3-208ENST00000613073 PA2G4Q9UQ80 394 aaKnown RBP20■□□□□ 0.79
CNOT3-208ENST00000613073 ERC2O15083 957 aa20■□□□□ 0.79
CNOT3-208ENST00000613073 CAVIN1Q6NZI2 390 aaKnown RBP20■□□□□ 0.79
CNOT3-208ENST00000613073 ZCRB1Q8TBF4 217 aaKnown RBP20■□□□□ 0.79
CNOT3-208ENST00000613073 DDX54Q8TDD1 881 aaKnown RBP20■□□□□ 0.79
CNOT3-208ENST00000613073 FMNL2Q96PY5 1086 aa19.99■□□□□ 0.79
CNOT3-208ENST00000613073 GOLGA6L22H0YM25 854 aa19.99■□□□□ 0.79
CNOT3-208ENST00000613073 GRM8O00222 908 aa19.99■□□□□ 0.79
CNOT3-208ENST00000613073 IGKV5-2P06315 115 aa19.99■□□□□ 0.79
CNOT3-208ENST00000613073 KIF1BPQ96EK5 621 aa19.99■□□□□ 0.79
CNOT3-208ENST00000613073 STAP2Q9UGK3 403 aa19.99■□□□□ 0.79
CNOT3-208ENST00000613073 REC8O95072 547 aa19.98■□□□□ 0.79
CNOT3-208ENST00000613073 EVA1CP58658 441 aa19.98■□□□□ 0.79
CNOT3-208ENST00000613073 LARP1Q6PKG0 1096 aaKnown RBP19.98■□□□□ 0.79
CNOT3-208ENST00000613073 SUCLG2Q96I99 432 aa19.98■□□□□ 0.79
CNOT3-208ENST00000613073 CIZ1Q9ULV3 898 aaPredicted RBP19.98■□□□□ 0.79
CNOT3-208ENST00000613073 JARID2Q92833 1246 aaPredicted RBP19.97■□□□□ 0.79
CNOT3-208ENST00000613073 MYD88Q99836 296 aa19.97■□□□□ 0.79
CNOT3-208ENST00000613073 MAP7D2Q96T17 732 aa19.97■□□□□ 0.79
CNOT3-208ENST00000613073 ABCC6O95255 1503 aa19.97■□□□□ 0.79
CNOT3-208ENST00000613073 COL5A2P05997 1499 aaPredicted RBP19.97■□□□□ 0.79
CNOT3-208ENST00000613073 K7ELQ4 463 aaPredicted RBP19.96■□□□□ 0.79
CNOT3-208ENST00000613073 MCTP1Q6DN14 999 aa19.96■□□□□ 0.79
CNOT3-208ENST00000613073 KAZALD1Q96I82 304 aa19.96■□□□□ 0.79
CNOT3-208ENST00000613073 BICC1Q9H694 974 aaKnown RBP19.96■□□□□ 0.79
CNOT3-208ENST00000613073 NEXNQ0ZGT2 675 aa19.96■□□□□ 0.79
CNOT3-208ENST00000613073 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.96■□□□□ 0.79
CNOT3-208ENST00000613073 PKD1L3Q7Z443 1732 aa19.95■□□□□ 0.79
CNOT3-208ENST00000613073 PCDH11XQ9BZA7 1347 aa19.95■□□□□ 0.78
CNOT3-208ENST00000613073 PCDH11YQ9BZA8 1340 aa19.95■□□□□ 0.78
CNOT3-208ENST00000613073 BAG4O95429 457 aaKnown RBP19.95■□□□□ 0.78
CNOT3-208ENST00000613073 CHMLP26374 656 aa19.95■□□□□ 0.78
CNOT3-208ENST00000613073 ANKRD13DQ6ZTN6 518 aa19.95■□□□□ 0.78
CNOT3-208ENST00000613073 ESYT1Q9BSJ8 1104 aa19.95■□□□□ 0.78
CNOT3-208ENST00000613073 RBSNQ9H1K0 784 aa19.95■□□□□ 0.78
CNOT3-208ENST00000613073 IL2RBP14784 551 aa19.95■□□□□ 0.78
CNOT3-208ENST00000613073 MTX1Q13505 466 aa19.95■□□□□ 0.78
CNOT3-208ENST00000613073 RABEP1Q15276 862 aa19.95■□□□□ 0.78
CNOT3-208ENST00000613073 NEURL1BA8MQ27 555 aa19.94■□□□□ 0.78
CNOT3-208ENST00000613073 KLHL40Q2TBA0 621 aa19.94■□□□□ 0.78
CNOT3-208ENST00000613073 HSP90AB4PQ58FF6 505 aa19.94■□□□□ 0.78
CNOT3-208ENST00000613073 LRP10Q7Z4F1 713 aa19.94■□□□□ 0.78
CNOT3-208ENST00000613073 MRC1P22897 1456 aa19.93■□□□□ 0.78
CNOT3-208ENST00000613073 PTCD1O75127 700 aaKnown RBP19.93■□□□□ 0.78
CNOT3-208ENST00000613073 PI4K2BQ8TCG2 481 aa19.93■□□□□ 0.78
CNOT3-208ENST00000613073 NOL7Q9UMY1 257 aaKnown RBP19.93■□□□□ 0.78
CNOT3-208ENST00000613073 METTL22Q9BUU2 404 aaPredicted RBP19.93■□□□□ 0.78
CNOT3-208ENST00000613073 CARD10Q9BWT7 1032 aa19.93■□□□□ 0.78
CNOT3-208ENST00000613073 ANO2Q9NQ90 1003 aa19.93■□□□□ 0.78
CNOT3-208ENST00000613073 ATP5J2-PTCD1G3V325 749 aa19.92■□□□□ 0.78
CNOT3-208ENST00000613073 SIL1Q9H173 461 aa19.92■□□□□ 0.78
CNOT3-208ENST00000613073 RBM27Q9P2N5 1060 aaKnown RBP19.92■□□□□ 0.78
CNOT3-208ENST00000613073 TERF1P54274 439 aa19.92■□□□□ 0.78
CNOT3-208ENST00000613073 GCKRQ14397 625 aa19.92■□□□□ 0.78
CNOT3-208ENST00000613073 KLHDC4Q8TBB5 520 aa19.92■□□□□ 0.78
CNOT3-208ENST00000613073 PTMSP20962 102 aa19.91■□□□□ 0.78
CNOT3-208ENST00000613073 PRIM1P49642 420 aaKnown RBP19.91■□□□□ 0.78
CNOT3-208ENST00000613073 ZSCAN23Q3MJ62 389 aa19.91■□□□□ 0.78
CNOT3-208ENST00000613073 HDAC5Q9UQL6 1122 aa19.91■□□□□ 0.78
CNOT3-208ENST00000613073 SMAP1Q8IYB5 467 aaPredicted RBP19.91■□□□□ 0.78
CNOT3-208ENST00000613073 CLASRPQ8N2M8 674 aaKnown RBP19.91■□□□□ 0.78
CNOT3-208ENST00000613073 TSC1Q92574 1164 aa19.91■□□□□ 0.78
CNOT3-208ENST00000613073 IL25Q9H293 177 aa19.91■□□□□ 0.78
CNOT3-208ENST00000613073 TUBGCP6Q96RT7 1819 aa19.91■□□□□ 0.78
CNOT3-208ENST00000613073 UTYO14607 1347 aa19.9■□□□□ 0.78
CNOT3-208ENST00000613073 EPHA10Q5JZY3 1008 aa19.9■□□□□ 0.78
CNOT3-208ENST00000613073 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.9■□□□□ 0.78
CNOT3-208ENST00000613073 AOX1Q06278 1338 aa19.9■□□□□ 0.78
CNOT3-208ENST00000613073 MPNDQ8N594 471 aa19.89■□□□□ 0.78
CNOT3-208ENST00000613073 CHAMP1Q96JM3 812 aa19.89■□□□□ 0.78
CNOT3-208ENST00000613073 PLEKHG2Q9H7P9 1386 aa19.89■□□□□ 0.77
CNOT3-208ENST00000613073 ZNF500O60304 480 aaPredicted RBP19.89■□□□□ 0.77
CNOT3-208ENST00000613073 BTG4Q9NY30 223 aa19.89■□□□□ 0.77
CNOT3-208ENST00000613073 AK9Q5TCS8 1911 aa19.88■□□□□ 0.77
CNOT3-208ENST00000613073 NBPF26B4DH59 902 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms