RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ANXA1P04083 346 aa16.11■□□□□ 0.17
CTSA-210ENST00000606000 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
CTSA-210ENST00000606000 PROSER3Q2NL68 480 aa16.11■□□□□ 0.17
CTSA-210ENST00000606000 TTLL7Q6ZT98 887 aa16.11■□□□□ 0.17
CTSA-210ENST00000606000 NECTIN2Q92692 538 aa16.11■□□□□ 0.17
CTSA-210ENST00000606000 SETDB2Q96T68 719 aa16.11■□□□□ 0.17
CTSA-210ENST00000606000 CHL1O00533 1208 aa16.1■□□□□ 0.17
CTSA-210ENST00000606000 DALRD3Q5D0E6 543 aaKnown RBP16.1■□□□□ 0.17
CTSA-210ENST00000606000 ARHGAP27Q6ZUM4 889 aa16.1■□□□□ 0.17
CTSA-210ENST00000606000 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
CTSA-210ENST00000606000 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
CTSA-210ENST00000606000 ANP32CO43423 234 aa16.09■□□□□ 0.17
CTSA-210ENST00000606000 PDIA6Q15084 440 aa16.09■□□□□ 0.17
CTSA-210ENST00000606000 CNBD1Q8NA66 436 aa16.09■□□□□ 0.17
CTSA-210ENST00000606000 BABAM1Q9NWV8 329 aa16.09■□□□□ 0.17
CTSA-210ENST00000606000 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.16
CTSA-210ENST00000606000 LRP10Q7Z4F1 713 aa16.08■□□□□ 0.16
CTSA-210ENST00000606000 ZNF526Q8TF50 670 aaPredicted RBP16.08■□□□□ 0.16
CTSA-210ENST00000606000 ZBTB3Q9H5J0 574 aa16.08■□□□□ 0.16
CTSA-210ENST00000606000 MRS2Q9HD23 443 aa16.08■□□□□ 0.16
CTSA-210ENST00000606000 NIP7Q9Y221 180 aaKnown RBP eCLIP16.08■□□□□ 0.16
CTSA-210ENST00000606000 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.16
CTSA-210ENST00000606000 MAP3K15Q6ZN16 1313 aa16.08■□□□□ 0.16
CTSA-210ENST00000606000 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.16
CTSA-210ENST00000606000 NPHP1O15259 732 aa16.07■□□□□ 0.16
CTSA-210ENST00000606000 MBIPQ9NS73 344 aa16.07■□□□□ 0.16
CTSA-210ENST00000606000 ANKRD36CQ5JPF3 1778 aa16.07■□□□□ 0.16
CTSA-210ENST00000606000 SBF1O95248 1867 aa16.06■□□□□ 0.16
CTSA-210ENST00000606000 ERBB4Q15303 1308 aa16.06■□□□□ 0.16
CTSA-210ENST00000606000 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
CTSA-210ENST00000606000 NBPF5PQ86XG9 351 aaPredicted RBP16.06■□□□□ 0.16
CTSA-210ENST00000606000 BRIP1Q9BX63 1249 aa16.06■□□□□ 0.16
CTSA-210ENST00000606000 ABCC12Q96J65 1359 aa16.05■□□□□ 0.16
CTSA-210ENST00000606000 UBN2Q6ZU65 1347 aa16.05■□□□□ 0.16
CTSA-210ENST00000606000 H0YIN7 160 aa16.05■□□□□ 0.16
CTSA-210ENST00000606000 GPTP24298 496 aa16.05■□□□□ 0.16
CTSA-210ENST00000606000 ST5P78524 1137 aa16.05■□□□□ 0.16
CTSA-210ENST00000606000 RASSF7Q02833 373 aa16.05■□□□□ 0.16
CTSA-210ENST00000606000 ZNF622Q969S3 477 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTSA-210ENST00000606000 CFAP44Q96MT7 982 aa16.05■□□□□ 0.16
CTSA-210ENST00000606000 SLX4Q8IY92 1834 aa16.05■□□□□ 0.16
CTSA-210ENST00000606000 ZNF853P0CG23 659 aa16.04■□□□□ 0.16
CTSA-210ENST00000606000 PDE6BP35913 854 aa16.04■□□□□ 0.16
CTSA-210ENST00000606000 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
CTSA-210ENST00000606000 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
CTSA-210ENST00000606000 TIAM2Q8IVF5 1701 aa16.04■□□□□ 0.16
CTSA-210ENST00000606000 ERVV-1B6SEH8 477 aa16.03■□□□□ 0.16
CTSA-210ENST00000606000 RGL2O15211 777 aa16.03■□□□□ 0.16
CTSA-210ENST00000606000 PRELPP51888 382 aa16.03■□□□□ 0.16
CTSA-210ENST00000606000 NUTM1Q86Y26 1132 aa16.03■□□□□ 0.16
CTSA-210ENST00000606000 CHPF2Q9P2E5 772 aa16.03■□□□□ 0.16
CTSA-210ENST00000606000 CCDC88AQ3V6T2 1871 aa16.02■□□□□ 0.16
CTSA-210ENST00000606000 SRGNP10124 158 aa16.02■□□□□ 0.16
CTSA-210ENST00000606000 AIMP1Q12904 312 aaKnown RBP16.02■□□□□ 0.16
CTSA-210ENST00000606000 C9orf131Q5VYM1 1079 aa16.02■□□□□ 0.16
CTSA-210ENST00000606000 XAGE3Q8WTP9 111 aa16.02■□□□□ 0.16
CTSA-210ENST00000606000 IFT57Q9NWB7 429 aa16.02■□□□□ 0.16
CTSA-210ENST00000606000 FER1L6Q2WGJ9 1857 aa16.01■□□□□ 0.15
CTSA-210ENST00000606000 HDGFL1Q5TGJ6 251 aa16.01■□□□□ 0.15
CTSA-210ENST00000606000 SUSD4Q5VX71 490 aa16.01■□□□□ 0.15
CTSA-210ENST00000606000 DUSP27Q5VZP5 1158 aa16.01■□□□□ 0.15
CTSA-210ENST00000606000 GIGYF2Q6Y7W6 1299 aaKnown RBP16.01■□□□□ 0.15
CTSA-210ENST00000606000 COPS6Q7L5N1 327 aa16.01■□□□□ 0.15
CTSA-210ENST00000606000 ELL2O00472 640 aaPredicted RBP16■□□□□ 0.15
CTSA-210ENST00000606000 C21orf2O43822 256 aa16■□□□□ 0.15
CTSA-210ENST00000606000 ERFEQ4G0M1 354 aa16■□□□□ 0.15
CTSA-210ENST00000606000 TPTE2Q6XPS3 522 aa16■□□□□ 0.15
CTSA-210ENST00000606000 ZNF34Q8IZ26 560 aa16■□□□□ 0.15
CTSA-210ENST00000606000 ZNF428Q96B54 188 aa16■□□□□ 0.15
CTSA-210ENST00000606000 GPBP1L1Q9HC44 474 aaPredicted RBP16■□□□□ 0.15
CTSA-210ENST00000606000 DDX21Q9NR30 783 aaKnown RBP eCLIP16■□□□□ 0.15
CTSA-210ENST00000606000 RNF181Q9P0P0 153 aa16■□□□□ 0.15
CTSA-210ENST00000606000 NFKBIEO00221 500 aa15.99■□□□□ 0.15
CTSA-210ENST00000606000 GNAI1P63096 354 aa15.99■□□□□ 0.15
CTSA-210ENST00000606000 STYK1Q6J9G0 422 aa15.99■□□□□ 0.15
CTSA-210ENST00000606000 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
CTSA-210ENST00000606000 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
CTSA-210ENST00000606000 LAMB2P55268 1798 aa15.99■□□□□ 0.15
CTSA-210ENST00000606000 NTSR2O95665 410 aa15.98■□□□□ 0.15
CTSA-210ENST00000606000 HOXB7P09629 217 aa15.98■□□□□ 0.15
CTSA-210ENST00000606000 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
CTSA-210ENST00000606000 C8orf58Q8NAV2 365 aa15.98■□□□□ 0.15
CTSA-210ENST00000606000 MASTLQ96GX5 879 aa15.98■□□□□ 0.15
CTSA-210ENST00000606000 PDZRN3Q9UPQ7 1066 aa15.98■□□□□ 0.15
CTSA-210ENST00000606000 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
CTSA-210ENST00000606000 IBTKQ9P2D0 1353 aaPredicted RBP15.98■□□□□ 0.15
CTSA-210ENST00000606000 CALD1Q05682 793 aaKnown RBP15.97■□□□□ 0.15
CTSA-210ENST00000606000 OLFM4Q6UX06 510 aa15.97■□□□□ 0.15
CTSA-210ENST00000606000 C3orf67Q6ZVT6 689 aa15.97■□□□□ 0.15
CTSA-210ENST00000606000 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
CTSA-210ENST00000606000 WWC1Q8IX03 1113 aa15.97■□□□□ 0.15
CTSA-210ENST00000606000 TSPYL6Q8N831 410 aa15.97■□□□□ 0.15
CTSA-210ENST00000606000 KLRG2A4D1S0 409 aaPredicted RBP15.96■□□□□ 0.15
CTSA-210ENST00000606000 C1QTNF8P60827 252 aa15.96■□□□□ 0.15
CTSA-210ENST00000606000 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.15
CTSA-210ENST00000606000 CNKSR1Q969H4 720 aa15.96■□□□□ 0.15
CTSA-210ENST00000606000 NYXQ9GZU5 481 aa15.96■□□□□ 0.15
CTSA-210ENST00000606000 RIC1Q4ADV7 1423 aa15.95■□□□□ 0.14
CTSA-210ENST00000606000 DDX60Q8IY21 1712 aaKnown RBP15.95■□□□□ 0.14
CTSA-210ENST00000606000 NPR1P16066 1061 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms