RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	SETSIP	P0DME0	302 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TRH	P20396	242 aa	Predicted RBP	4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RNF168	Q8IYW5	571 aa	Predicted RBP	4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	FRMD4B	Q9Y2L6	1034 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	KIF4A	O95239	1232 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ME1	P48163	572 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TTC5	Q8N0Z6	440 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ANKS4B	Q8N8V4	417 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	VCX	Q9H320	206 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SLC52A1	Q9NWF4	448 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MGEA5	O60502	916 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SYF2	O95926	243 aa	Known RBP	4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PRKG1	Q13976	671 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MKL2	Q9ULH7	1088 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	USO1	O60763	962 aa	Known RBP	4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZBTB16	Q05516	673 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	LRSAM1	Q6UWE0	723 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZBTB9	Q96C00	473 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PPP1R12C	Q9BZL4	782 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TAOK3	Q9H2K8	898 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZFYVE1	Q9HBF4	777 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PPP1R12B	O60237	982 aa	Predicted RBP	4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	GMNN	O75496	209 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZNF853	P0CG23	659 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TERF1	P54274	439 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MAP3K9	P80192	1104 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	UBA5	Q9GZZ9	404 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TSPYL2	Q9H2G4	693 aa	Predicted RBP	4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SFMBT1	Q9UHJ3	866 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RIMBP3C	A6NJZ7	1639 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RIMBP3B	A6NNM3	1639 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RIMBP3	Q9UFD9	1639 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	GSDMB	Q8TAX9	411 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TMX1	Q9H3N1	280 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RABGAP1	Q9Y3P9	1069 aa		4.73	□□□□□ -1.65
KCNMA1-223	ENST00000604624	DLC1	Q96QB1	1528 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PRC1	O43663	620 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PSMD6	Q15008	389 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	KIF4B	Q2VIQ3	1234 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PPFIBP2	Q8ND30	876 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ATP2A3	Q93084	1043 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ANKFY1	Q9P2R3	1169 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TSPY26P	Q9H489	355 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	NLRP1	Q9C000	1473 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CBFA2T2	O43439	604 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RRP9	O43818	475 aa	Known RBP	4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SNX16	P57768	344 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	IMMT	Q16891	758 aa	Known RBP	4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	MAATS1	Q7Z4T9	603 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CCDC144CP	Q8IYA2	1237 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CCDC150	Q8NCX0	1101 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	ZNF644	Q9H582	1327 aa	Predicted RBP	4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RAP1GDS1	P52306	607 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PPP4R4	Q6NUP7	873 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CCDC129	Q6ZRS4	1044 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	FILIP1	Q7Z7B0	1213 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	COL17A1	Q9UMD9	1497 aa	Predicted RBP	4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SMIM24	O75264	130 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RBM5	P52756	815 aa	Known RBP eCLIP	4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	GBP3	Q9H0R5	595 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	NINL	Q9Y2I6	1382 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CCDC192	P0DO97	292 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	C1orf141	Q5JVX7	400 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SLIT1	O75093	1534 aa		4.72	□□□□□ -1.65
KCNMA1-223	ENST00000604624	BRPF3	Q9ULD4	1205 aa		4.71	□□□□□ -1.65
KCNMA1-223	ENST00000604624	TRIM35	Q9UPQ4	493 aa		4.71	□□□□□ -1.65
KCNMA1-223	ENST00000604624	RRP7A	Q9Y3A4	280 aa	Known RBP	4.71	□□□□□ -1.65
KCNMA1-223	ENST00000604624	CCDC144A	A2RUR9	1427 aa		4.71	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PIK3C2G	O75747	1445 aa		4.71	□□□□□ -1.65
KCNMA1-223	ENST00000604624	FERMT1	Q9BQL6	677 aa		4.71	□□□□□ -1.65
KCNMA1-223	ENST00000604624	SPA17	Q15506	151 aa		4.71	□□□□□ -1.65
KCNMA1-223	ENST00000604624	DBN1	Q16643	649 aa		4.71	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	4.71	□□□□□ -1.65
KCNMA1-223	ENST00000604624	PIBF1	Q8WXW3	757 aa		4.71	□□□□□ -1.65
KCNMA1-223	ENST00000604624	VIM	P08670	466 aa	Known RBP	4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TTC31	Q49AM3	519 aa	Predicted RBP	4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	BRD4	O60885	1362 aa	Predicted RBP	4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PRPF40A	O75400	957 aa	Known RBP	4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ZNF76	P36508	570 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SMARCC1	Q92922	1105 aa	Predicted RBP	4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CASQ2	O14958	399 aa	Predicted RBP	4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	VPS41	P49754	854 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	MAP3K7CL	P57077	242 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	BAG1	Q99933	345 aa	Predicted RBP	4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	NUF2	Q9BZD4	464 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TNMD	Q9H2S6	317 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ACTN2	P35609	894 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	INPP1	P49441	399 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CFAP100	Q494V2	611 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	MX2	P20592	715 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	STK38	Q15208	465 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	AMOT	Q4VCS5	1084 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CACNA2D4	Q7Z3S7	1137 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	STIM2	Q9P246	746 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	NCOA3	Q9Y6Q9	1424 aa		4.71	□□□□□ -1.66

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