RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	TSPYL4	Q9UJ04	414 aa		13.92	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	MTMR6	Q9Y217	621 aa		13.92	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	MYO5B	Q9ULV0	1848 aa		13.92	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	TOPAZ1	Q8N9V7	1692 aa		13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	FAM208A	Q9UK61	1670 aa	Known RBP	13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	GADD45B	O75293	160 aa	Predicted RBP	13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	TUBB4B	P68371	445 aa		13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	RILPL2	Q969X0	211 aa		13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	THUMPD2	Q9BTF0	503 aa	Known RBP	13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	NAT10	Q9H0A0	1025 aa	Known RBP	13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	CLSTN2	Q9H4D0	955 aa		13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	TTC12	Q9H892	705 aa	Predicted RBP	13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	CTNNA3	Q9UI47	895 aa		13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.91	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	SMARCA5	O60264	1052 aa	Predicted RBP	13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	TYRO3	Q06418	890 aa		13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	SULT6B1	Q6IMI4	303 aa		13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	EVI5L	Q96CN4	794 aa		13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	LLPH	Q9BRT6	129 aa	Known RBP	13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	PDRG1	Q9NUG6	133 aa		13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	STAG3	Q9UJ98	1225 aa		13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	PALD1	Q9ULE6	856 aa		13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	CNPY2	Q9Y2B0	182 aa		13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	LMTK3	Q96Q04	1460 aa		13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	USP54	Q70EL1	1684 aa		13.9	□□□□□ -0.18
U2AF1L4-221	ENST00000601236	OVOS2	A0A0G2JMS6	1433 aa		13.9	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	ZNF75D	P51815	510 aa		13.89	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	AK2	P54819	239 aa		13.89	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	RUFY3	Q7L099	469 aa		13.89	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	TNMD	Q9H2S6	317 aa		13.89	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	FAM53C	Q9NYF3	392 aa		13.89	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	IGSF1	Q8N6C5	1336 aa		13.89	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	CFAP65	Q6ZU64	1925 aa	Known RBP	13.88	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	NCBP1	Q09161	790 aa	Known RBP	13.88	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	KIF18A	Q8NI77	898 aa		13.88	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	PI4K2B	Q8TCG2	481 aa		13.88	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	RHPN1	Q8TCX5	695 aa		13.88	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	TSPOAP1	O95153	1857 aa		13.88	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	USP6	P35125	1406 aa		13.88	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	GOLGA6L19	H0YKK7	550 aa		13.87	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	ALDH1L1	O75891	902 aa		13.87	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	TNNT1	P13805	278 aa		13.87	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	GJB2	P29033	226 aa		13.87	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	BMS1	Q14692	1282 aa	Known RBP	13.87	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	NME9	Q86XW9	330 aa		13.87	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	CLASRP	Q8N2M8	674 aa	Known RBP	13.87	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	KCNF1	Q9H3M0	494 aa		13.87	□□□□□ -0.19
U2AF1L4-221	ENST00000601236		V9GYY5	206 aa	Predicted RBP	13.87	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	JCAD	Q9P266	1359 aa		13.86	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	PSD	A5PKW4	1024 aa	Predicted RBP	13.86	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	HMGB1	P09429	215 aa	Known RBP	13.86	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	LARP1B	Q659C4	914 aa	Known RBP	13.86	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	ZSCAN25	Q6NSZ9	544 aa		13.86	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	CCDC150	Q8NCX0	1101 aa		13.86	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	BPIFA3	Q9BQP9	254 aa		13.86	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.86	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	EXOC6B	Q9Y2D4	811 aa		13.86	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	RIMS1	Q86UR5	1692 aa	Known RBP	13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	SLIT1	O75093	1534 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	PLEKHG2	Q9H7P9	1386 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	PLEKHG1	Q9ULL1	1385 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	FMN2	Q9NZ56	1722 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	FIBP	O43427	364 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	TPM4	P67936	248 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	CBX1	P83916	185 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	NECTIN1	Q15223	517 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	STX1A	Q16623	288 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	CEP135	Q66GS9	1140 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	UPF3B	Q9BZI7	483 aa	Known RBP	13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	TRIM5	Q9C035	493 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	ECHDC1	Q9NTX5	307 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	ANO10	Q9NW15	660 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	MRVI1	Q9Y6F6	885 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	NRXN3	Q9Y4C0	1643 aa		13.85	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	GNAT3	A8MTJ3	354 aa		13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	ZNF165	P49910	485 aa		13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	TAF7	Q15545	349 aa	Predicted RBP	13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	PTPN14	Q15678	1187 aa		13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	TEX35	Q5T0J7	233 aa		13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	NAA16	Q6N069	864 aa	Predicted RBP	13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	SLC4A10	Q6U841	1118 aa		13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	NYAP1	Q6ZVC0	841 aa		13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	MAP4K1	Q92918	833 aa		13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	USP44	Q9H0E7	712 aa		13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.84	□□□□□ -0.19
U2AF1L4-221	ENST00000601236	FAM83G	A6ND36	823 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	GOLGA6L9	A6NEM1	432 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	SLU7	O95391	586 aa	Known RBP	13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	CAST	P20810	708 aa	Known RBP	13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	TERF2	Q15554	542 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	ATP2B3	Q16720	1220 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	TPD52L1	Q16890	204 aa	Predicted RBP	13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	GIMAP6	Q6P9H5	292 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	FCHSD1	Q86WN1	690 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	DRC7	Q8IY82	874 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	SPATA32	Q96LK8	384 aa		13.83	□□□□□ -0.2
U2AF1L4-221	ENST00000601236	TIGD1	Q96MW7	591 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms