RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 C9orf131Q5VYM1 1079 aa23.53■■□□□ 1.36
CHMP2A-203ENST00000597209 ZNF526Q8TF50 670 aaPredicted RBP23.53■■□□□ 1.36
CHMP2A-203ENST00000597209 NPHP1O15259 732 aa23.52■■□□□ 1.36
CHMP2A-203ENST00000597209 RRP7AQ9Y3A4 280 aaKnown RBP23.52■■□□□ 1.36
CHMP2A-203ENST00000597209 HLFQ16534 295 aa23.51■■□□□ 1.35
CHMP2A-203ENST00000597209 NBPF5PQ86XG9 351 aaPredicted RBP23.51■■□□□ 1.35
CHMP2A-203ENST00000597209 CCDC24Q8N4L8 307 aa23.51■■□□□ 1.35
CHMP2A-203ENST00000597209 TRIM35Q9UPQ4 493 aa23.51■■□□□ 1.35
CHMP2A-203ENST00000597209 NIP7Q9Y221 180 aaKnown RBP eCLIP23.51■■□□□ 1.35
CHMP2A-203ENST00000597209 NEUROD2Q15784 382 aa23.5■■□□□ 1.35
CHMP2A-203ENST00000597209 TPTE2Q6XPS3 522 aa23.5■■□□□ 1.35
CHMP2A-203ENST00000597209 ZNF622Q969S3 477 aaKnown RBP eCLIP23.5■■□□□ 1.357e-8■■□□□ 12.3
CHMP2A-203ENST00000597209 COL11A2P13942 1736 aaPredicted RBP23.5■■□□□ 1.35
CHMP2A-203ENST00000597209 SBF1O95248 1867 aa23.49■■□□□ 1.35
CHMP2A-203ENST00000597209 SRGNP10124 158 aa23.49■■□□□ 1.35
CHMP2A-203ENST00000597209 STYK1Q6J9G0 422 aa23.49■■□□□ 1.35
CHMP2A-203ENST00000597209 MAP3K15Q6ZN16 1313 aa23.49■■□□□ 1.35
CHMP2A-203ENST00000597209 KLRG2A4D1S0 409 aaPredicted RBP23.48■■□□□ 1.35
CHMP2A-203ENST00000597209 CHL1O00533 1208 aa23.48■■□□□ 1.35
CHMP2A-203ENST00000597209 CNKSR1Q969H4 720 aa23.48■■□□□ 1.35
CHMP2A-203ENST00000597209 RNF181Q9P0P0 153 aa23.48■■□□□ 1.35
CHMP2A-203ENST00000597209 KIF3CO14782 793 aa23.47■■□□□ 1.35
CHMP2A-203ENST00000597209 MYL6BP14649 208 aa23.47■■□□□ 1.35
CHMP2A-203ENST00000597209 KIF6Q6ZMV9 814 aa23.47■■□□□ 1.35
CHMP2A-203ENST00000597209 NGEFQ8N5V2 710 aa23.47■■□□□ 1.35
CHMP2A-203ENST00000597209 MASTLQ96GX5 879 aa23.47■■□□□ 1.35
CHMP2A-203ENST00000597209 NUP98P52948 1817 aa23.46■■□□□ 1.35
CHMP2A-203ENST00000597209 TTLL7Q6ZT98 887 aa23.46■■□□□ 1.35
CHMP2A-203ENST00000597209 ZC3H4Q9UPT8 1303 aaKnown RBP23.46■■□□□ 1.35
CHMP2A-203ENST00000597209 LMNB1P20700 586 aa23.45■■□□□ 1.34
CHMP2A-203ENST00000597209 PDIA6Q15084 440 aa23.45■■□□□ 1.34
CHMP2A-203ENST00000597209 LRP10Q7Z4F1 713 aa23.45■■□□□ 1.34
CHMP2A-203ENST00000597209 SENP3-EIF4A1A0A087X0R7 540 aa23.44■■□□□ 1.34
CHMP2A-203ENST00000597209 RASSF7Q02833 373 aa23.44■■□□□ 1.34
CHMP2A-203ENST00000597209 NYXQ9GZU5 481 aa23.44■■□□□ 1.34
CHMP2A-203ENST00000597209 ARFGEF2Q9Y6D5 1785 aa23.44■■□□□ 1.34
CHMP2A-203ENST00000597209 NFKBIEO00221 500 aa23.43■■□□□ 1.34
CHMP2A-203ENST00000597209 EIF2S2P20042 333 aaKnown RBP23.43■■□□□ 1.34
CHMP2A-203ENST00000597209 IBTKQ9P2D0 1353 aaPredicted RBP23.42■■□□□ 1.34
CHMP2A-203ENST00000597209 C21orf2O43822 256 aa23.42■■□□□ 1.34
CHMP2A-203ENST00000597209 NPR1P16066 1061 aa23.42■■□□□ 1.34
CHMP2A-203ENST00000597209 PRELPP51888 382 aa23.42■■□□□ 1.34
CHMP2A-203ENST00000597209 GIGYF2Q6Y7W6 1299 aaKnown RBP23.42■■□□□ 1.34
CHMP2A-203ENST00000597209 KDM2BQ8NHM5 1336 aa23.41■■□□□ 1.34
CHMP2A-203ENST00000597209 SOGA3Q5TF21 947 aa23.41■■□□□ 1.34
CHMP2A-203ENST00000597209 ZNF34Q8IZ26 560 aa23.41■■□□□ 1.34
CHMP2A-203ENST00000597209 CFAP44Q96MT7 982 aa23.41■■□□□ 1.34
CHMP2A-203ENST00000597209 ZBTB3Q9H5J0 574 aa23.41■■□□□ 1.34
CHMP2A-203ENST00000597209 FER1L6Q2WGJ9 1857 aa23.41■■□□□ 1.34
CHMP2A-203ENST00000597209 SLX4Q8IY92 1834 aa23.4■■□□□ 1.34
CHMP2A-203ENST00000597209 LTBP3Q9NS15 1303 aa23.4■■□□□ 1.34
CHMP2A-203ENST00000597209 FAM177BA6PVY3 158 aa23.4■■□□□ 1.34
CHMP2A-203ENST00000597209 HOXB7P09629 217 aa23.4■■□□□ 1.34
CHMP2A-203ENST00000597209 GTF2E1P29083 439 aaPredicted RBP23.4■■□□□ 1.34
CHMP2A-203ENST00000597209 PRPF40BQ6NWY9 871 aaKnown RBP23.4■■□□□ 1.34
CHMP2A-203ENST00000597209 ZNF316A6NFI3 1004 aaPredicted RBP23.39■■□□□ 1.33
CHMP2A-203ENST00000597209 APAF1O14727 1248 aa23.39■■□□□ 1.33
CHMP2A-203ENST00000597209 C7orf43Q8WVR3 580 aa23.39■■□□□ 1.33
CHMP2A-203ENST00000597209 NMRK2Q9NPI5 230 aa23.39■■□□□ 1.33
CHMP2A-203ENST00000597209 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.33
CHMP2A-203ENST00000597209 RIC1Q4ADV7 1423 aa23.39■■□□□ 1.33
CHMP2A-203ENST00000597209 UBN2Q6ZU65 1347 aa23.38■■□□□ 1.33
CHMP2A-203ENST00000597209 TOMM70O94826 608 aa23.38■■□□□ 1.33
CHMP2A-203ENST00000597209 PROSER3Q2NL68 480 aa23.38■■□□□ 1.33
CHMP2A-203ENST00000597209 DDX21Q9NR30 783 aaKnown RBP eCLIP23.38■■□□□ 1.33
CHMP2A-203ENST00000597209 ZNF853P0CG23 659 aa23.37■■□□□ 1.33
CHMP2A-203ENST00000597209 ALDH1B1P30837 517 aa23.37■■□□□ 1.33
CHMP2A-203ENST00000597209 CALD1Q05682 793 aaKnown RBP23.37■■□□□ 1.33
CHMP2A-203ENST00000597209 PARP10Q53GL7 1025 aa23.37■■□□□ 1.33
CHMP2A-203ENST00000597209 SUSD4Q5VX71 490 aa23.37■■□□□ 1.33
CHMP2A-203ENST00000597209 ZNF219Q9P2Y4 722 aaPredicted RBP23.37■■□□□ 1.33
CHMP2A-203ENST00000597209 CCDC88AQ3V6T2 1871 aa23.36■■□□□ 1.33
CHMP2A-203ENST00000597209 KRT24Q2M2I5 525 aa23.36■■□□□ 1.33
CHMP2A-203ENST00000597209 CRY2Q49AN0 593 aa23.36■■□□□ 1.33
CHMP2A-203ENST00000597209 CACNA1SQ13698 1873 aa23.36■■□□□ 1.33
CHMP2A-203ENST00000597209 TNRC6CQ9HCJ0 1690 aaKnown RBP23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 GLTPD2A6NH11 291 aa23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 ANXA1P04083 346 aa23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 GPTP24298 496 aa23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 ERFEQ4G0M1 354 aa23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 COPS6Q7L5N1 327 aa23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 PPP1R42Q7Z4L9 355 aa23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 NUTM1Q86Y26 1132 aa23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 TAOK3Q9H2K8 898 aa23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 IFT57Q9NWB7 429 aa23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 ABCC12Q96J65 1359 aa23.35■■□□□ 1.33
CHMP2A-203ENST00000597209 TIAM2Q8IVF5 1701 aa23.34■■□□□ 1.33
CHMP2A-203ENST00000597209 DICER1Q9UPY3 1922 aaKnown RBP23.34■■□□□ 1.33
CHMP2A-203ENST00000597209 NTSR2O95665 410 aa23.34■■□□□ 1.33
CHMP2A-203ENST00000597209 HSPA6P17066 643 aa23.34■■□□□ 1.33
CHMP2A-203ENST00000597209 HSP90AB3PQ58FF7 597 aa23.34■■□□□ 1.33
CHMP2A-203ENST00000597209 NECTIN2Q92692 538 aa23.34■■□□□ 1.33
CHMP2A-203ENST00000597209 MBIPQ9NS73 344 aa23.34■■□□□ 1.33
CHMP2A-203ENST00000597209 GNAI1P63096 354 aa23.33■■□□□ 1.33
CHMP2A-203ENST00000597209 CCDC184Q52MB2 194 aa23.33■■□□□ 1.33
CHMP2A-203ENST00000597209 CCDC93Q567U6 631 aa23.33■■□□□ 1.33
CHMP2A-203ENST00000597209 XAGE3Q8WTP9 111 aa23.33■■□□□ 1.33
CHMP2A-203ENST00000597209 HDGFL1Q5TGJ6 251 aa23.32■■□□□ 1.32
CHMP2A-203ENST00000597209 RBM46Q8TBY0 533 aaKnown RBP23.32■■□□□ 1.32
CHMP2A-203ENST00000597209 RRAGCQ9HB90 399 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms