RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ZNF784Q8NCA9 323 aaPredicted RBP24.15■■□□□ 1.46
SHKBP1-202ENST00000593764 ZNF652Q9Y2D9 606 aa24.15■■□□□ 1.46
SHKBP1-202ENST00000593764 CCDC24Q8N4L8 307 aa24.13■■□□□ 1.45
SHKBP1-202ENST00000593764 MBIPQ9NS73 344 aa24.13■■□□□ 1.45
SHKBP1-202ENST00000593764 ERVV-1B6SEH8 477 aa24.12■■□□□ 1.45
SHKBP1-202ENST00000593764 PROSER3Q2NL68 480 aa24.12■■□□□ 1.45
SHKBP1-202ENST00000593764 BRIP1Q9BX63 1249 aa24.12■■□□□ 1.45
SHKBP1-202ENST00000593764 MAP3K15Q6ZN16 1313 aa24.11■■□□□ 1.45
SHKBP1-202ENST00000593764 DALRD3Q5D0E6 543 aaKnown RBP24.11■■□□□ 1.45
SHKBP1-202ENST00000593764 IFT57Q9NWB7 429 aa24.11■■□□□ 1.45
SHKBP1-202ENST00000593764 NIP7Q9Y221 180 aaKnown RBP eCLIP24.11■■□□□ 1.45
SHKBP1-202ENST00000593764 SENP3-EIF4A1A0A087X0R7 540 aa24.1■■□□□ 1.45
SHKBP1-202ENST00000593764 ANXA1P04083 346 aa24.1■■□□□ 1.45
SHKBP1-202ENST00000593764 C2CD5Q86YS7 1000 aa24.1■■□□□ 1.45
SHKBP1-202ENST00000593764 CNBD1Q8NA66 436 aa24.1■■□□□ 1.45
SHKBP1-202ENST00000593764 NECTIN2Q92692 538 aa24.1■■□□□ 1.45
SHKBP1-202ENST00000593764 ANKRD31Q8N7Z5 1873 aa24.09■■□□□ 1.45
SHKBP1-202ENST00000593764 H0YIN7 160 aa24.08■■□□□ 1.45
SHKBP1-202ENST00000593764 GNAI1P63096 354 aa24.08■■□□□ 1.45
SHKBP1-202ENST00000593764 CALD1Q05682 793 aaKnown RBP24.08■■□□□ 1.45
SHKBP1-202ENST00000593764 CCDC27Q2M243 656 aa24.08■■□□□ 1.45
SHKBP1-202ENST00000593764 KIF6Q6ZMV9 814 aa24.08■■□□□ 1.45
SHKBP1-202ENST00000593764 NBPF5PQ86XG9 351 aaPredicted RBP24.08■■□□□ 1.45
SHKBP1-202ENST00000593764 HOXB7P09629 217 aa24.07■■□□□ 1.44
SHKBP1-202ENST00000593764 PDE6BP35913 854 aa24.07■■□□□ 1.44
SHKBP1-202ENST00000593764 ARHGAP27Q6ZUM4 889 aa24.07■■□□□ 1.44
SHKBP1-202ENST00000593764 ZBTB3Q9H5J0 574 aa24.07■■□□□ 1.44
SHKBP1-202ENST00000593764 ARFGEF1Q9Y6D6 1849 aa24.07■■□□□ 1.44
SHKBP1-202ENST00000593764 DUSP27Q5VZP5 1158 aa24.06■■□□□ 1.44
SHKBP1-202ENST00000593764 WWC1Q8IX03 1113 aa24.06■■□□□ 1.44
SHKBP1-202ENST00000593764 DDX21Q9NR30 783 aaKnown RBP eCLIP24.06■■□□□ 1.44
SHKBP1-202ENST00000593764 NUP98P52948 1817 aa24.05■■□□□ 1.44
SHKBP1-202ENST00000593764 NPHP1O15259 732 aa24.05■■□□□ 1.44
SHKBP1-202ENST00000593764 ST5P78524 1137 aa24.05■■□□□ 1.44
SHKBP1-202ENST00000593764 NCBP3Q53F19 620 aaKnown RBP24.05■■□□□ 1.44
SHKBP1-202ENST00000593764 TPTE2Q6XPS3 522 aa24.05■■□□□ 1.44
SHKBP1-202ENST00000593764 GIGYF2Q6Y7W6 1299 aaKnown RBP24.05■■□□□ 1.44
SHKBP1-202ENST00000593764 PDZRN3Q9UPQ7 1066 aa24.05■■□□□ 1.44
SHKBP1-202ENST00000593764 DLEC1Q9Y238 1755 aa24.04■■□□□ 1.44
SHKBP1-202ENST00000593764 ATP10DQ9P241 1426 aa24.04■■□□□ 1.44
SHKBP1-202ENST00000593764 TTLL6Q8N841 843 aa24.04■■□□□ 1.44
SHKBP1-202ENST00000593764 CHPF2Q9P2E5 772 aa24.04■■□□□ 1.44
SHKBP1-202ENST00000593764 ADCY9O60503 1353 aa24.03■■□□□ 1.44
SHKBP1-202ENST00000593764 FAM177BA6PVY3 158 aa24.03■■□□□ 1.44
SHKBP1-202ENST00000593764 HDGFL1Q5TGJ6 251 aa24.03■■□□□ 1.44
SHKBP1-202ENST00000593764 COPS6Q7L5N1 327 aa24.03■■□□□ 1.44
SHKBP1-202ENST00000593764 ZNF34Q8IZ26 560 aa24.03■■□□□ 1.44
SHKBP1-202ENST00000593764 UBN2Q6ZU65 1347 aa24.03■■□□□ 1.44
SHKBP1-202ENST00000593764 XAGE3Q8WTP9 111 aa24.02■■□□□ 1.44
SHKBP1-202ENST00000593764 KLRG2A4D1S0 409 aaPredicted RBP24.01■■□□□ 1.43
SHKBP1-202ENST00000593764 SRGNP10124 158 aa24.01■■□□□ 1.43
SHKBP1-202ENST00000593764 GPTP24298 496 aa24.01■■□□□ 1.43
SHKBP1-202ENST00000593764 C8orf58Q8NAV2 365 aa24.01■■□□□ 1.43
SHKBP1-202ENST00000593764 ZNF622Q969S3 477 aaKnown RBP eCLIP24.01■■□□□ 1.43
SHKBP1-202ENST00000593764 ELL2O00472 640 aaPredicted RBP24■■□□□ 1.43
SHKBP1-202ENST00000593764 AIMP1Q12904 312 aaKnown RBP24■■□□□ 1.43
SHKBP1-202ENST00000593764 FAM9BQ8IZU0 186 aa24■■□□□ 1.43
SHKBP1-202ENST00000593764 COL11A2P13942 1736 aaPredicted RBP24■■□□□ 1.43
SHKBP1-202ENST00000593764 SUSD4Q5VX71 490 aa23.99■■□□□ 1.43
SHKBP1-202ENST00000593764 DBF4Q9UBU7 674 aaPredicted RBP23.99■■□□□ 1.43
SHKBP1-202ENST00000593764 STYK1Q6J9G0 422 aa23.98■■□□□ 1.43
SHKBP1-202ENST00000593764 NUTM1Q86Y26 1132 aa23.98■■□□□ 1.43
SHKBP1-202ENST00000593764 NYXQ9GZU5 481 aa23.98■■□□□ 1.43
SHKBP1-202ENST00000593764 IL16Q14005 1332 aa23.97■■□□□ 1.43
SHKBP1-202ENST00000593764 TSR2Q969E8 191 aaKnown RBP23.97■■□□□ 1.43
SHKBP1-202ENST00000593764 MASTLQ96GX5 879 aa23.97■■□□□ 1.43
SHKBP1-202ENST00000593764 IBTKQ9P2D0 1353 aaPredicted RBP23.96■■□□□ 1.43
SHKBP1-202ENST00000593764 GTF2E1P29083 439 aaPredicted RBP23.96■■□□□ 1.43
SHKBP1-202ENST00000593764 ERFEQ4G0M1 354 aa23.96■■□□□ 1.43
SHKBP1-202ENST00000593764 TSPYL6Q8N831 410 aa23.96■■□□□ 1.43
SHKBP1-202ENST00000593764 SALL2Q9Y467 1007 aaPredicted RBP23.96■■□□□ 1.43
SHKBP1-202ENST00000593764 ABCC12Q96J65 1359 aa23.95■■□□□ 1.42
SHKBP1-202ENST00000593764 NTSR2O95665 410 aa23.95■■□□□ 1.42
SHKBP1-202ENST00000593764 PARP10Q53GL7 1025 aa23.95■■□□□ 1.42
SHKBP1-202ENST00000593764 C9orf131Q5VYM1 1079 aa23.95■■□□□ 1.42
SHKBP1-202ENST00000593764 CNKSR1Q969H4 720 aa23.95■■□□□ 1.42
SHKBP1-202ENST00000593764 HYPKQ9NX55 129 aa23.95■■□□□ 1.42
SHKBP1-202ENST00000593764 TCIRG1Q13488 830 aa23.94■■□□□ 1.42
SHKBP1-202ENST00000593764 C21orf2O43822 256 aa23.93■■□□□ 1.42
SHKBP1-202ENST00000593764 NPR1P16066 1061 aa23.93■■□□□ 1.42
SHKBP1-202ENST00000593764 ANKRD13DQ6ZTN6 518 aa23.93■■□□□ 1.42
SHKBP1-202ENST00000593764 PPP1R42Q7Z4L9 355 aa23.93■■□□□ 1.42
SHKBP1-202ENST00000593764 WDR63Q8IWG1 891 aa23.93■■□□□ 1.42
SHKBP1-202ENST00000593764 PLBD2Q8NHP8 589 aa23.93■■□□□ 1.42
SHKBP1-202ENST00000593764 SLX4Q8IY92 1834 aa23.93■■□□□ 1.42
SHKBP1-202ENST00000593764 PRELPP51888 382 aa23.92■■□□□ 1.42
SHKBP1-202ENST00000593764 RASSF7Q02833 373 aa23.92■■□□□ 1.42
SHKBP1-202ENST00000593764 CRY2Q49AN0 593 aa23.92■■□□□ 1.42
SHKBP1-202ENST00000593764 HSP90AB3PQ58FF7 597 aa23.92■■□□□ 1.42
SHKBP1-202ENST00000593764 PRPF40BQ6NWY9 871 aaKnown RBP23.92■■□□□ 1.42
SHKBP1-202ENST00000593764 ZNF219Q9P2Y4 722 aaPredicted RBP23.92■■□□□ 1.42
SHKBP1-202ENST00000593764 NFKBIEO00221 500 aa23.91■■□□□ 1.42
SHKBP1-202ENST00000593764 NLRP10Q86W26 655 aa23.91■■□□□ 1.42
SHKBP1-202ENST00000593764 C7orf43Q8WVR3 580 aa23.91■■□□□ 1.42
SHKBP1-202ENST00000593764 PHAXQ9H814 394 aaKnown RBP23.91■■□□□ 1.42
SHKBP1-202ENST00000593764 SBF1O95248 1867 aa23.91■■□□□ 1.42
SHKBP1-202ENST00000593764 ZNF526Q8TF50 670 aaPredicted RBP23.9■■□□□ 1.42
SHKBP1-202ENST00000593764 UTP14AQ9BVJ6 771 aaKnown RBP23.9■■□□□ 1.42
SHKBP1-202ENST00000593764 RIC1Q4ADV7 1423 aa23.9■■□□□ 1.42
SHKBP1-202ENST00000593764 TNRC6CQ9HCJ0 1690 aaKnown RBP23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms