RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
RAVER1-204ENST00000592208 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
RAVER1-204ENST00000592208 ECHDC1Q9NTX5 307 aa17.11■□□□□ 0.33
RAVER1-204ENST00000592208 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
RAVER1-204ENST00000592208 DEF6Q9H4E7 631 aa17.11■□□□□ 0.33
RAVER1-204ENST00000592208 DESP17661 470 aa17.11■□□□□ 0.33
RAVER1-204ENST00000592208 IQCEQ6IPM2 695 aa17.11■□□□□ 0.33
RAVER1-204ENST00000592208 SEC63Q9UGP8 760 aaKnown RBP17.11■□□□□ 0.33
RAVER1-204ENST00000592208 WDHD1O75717 1129 aaPredicted RBP17.11■□□□□ 0.33
RAVER1-204ENST00000592208 NFATC2IPQ8NCF5 419 aa17.11■□□□□ 0.33
RAVER1-204ENST00000592208 DNAI2Q9GZS0 605 aa17.11■□□□□ 0.33
RAVER1-204ENST00000592208 DZIP1Q86YF9 867 aaKnown RBP17.1■□□□□ 0.33
RAVER1-204ENST00000592208 SMARCC1Q92922 1105 aaPredicted RBP17.1■□□□□ 0.33
RAVER1-204ENST00000592208 PPP1R12BO60237 982 aaPredicted RBP17.1■□□□□ 0.33
RAVER1-204ENST00000592208 USP5P45974 858 aa17.1■□□□□ 0.33
RAVER1-204ENST00000592208 UPF3BQ9BZI7 483 aaKnown RBP17.1■□□□□ 0.33
RAVER1-204ENST00000592208 KIF2AO00139 706 aaPredicted RBP17.1■□□□□ 0.33
RAVER1-204ENST00000592208 CTAGE5O15320 804 aa17.1■□□□□ 0.33
RAVER1-204ENST00000592208 KIF20AO95235 890 aa17.1■□□□□ 0.33
RAVER1-204ENST00000592208 ZNF76P36508 570 aa17.1■□□□□ 0.33
RAVER1-204ENST00000592208 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
RAVER1-204ENST00000592208 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
RAVER1-204ENST00000592208 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
RAVER1-204ENST00000592208 MAP3K11Q16584 847 aa17.09■□□□□ 0.33
RAVER1-204ENST00000592208 NBPF6Q5VWK0 638 aa17.09■□□□□ 0.33
RAVER1-204ENST00000592208 NBPF5PQ86XG9 351 aaPredicted RBP17.09■□□□□ 0.33
RAVER1-204ENST00000592208 NBPF4Q96M43 638 aa17.09■□□□□ 0.33
RAVER1-204ENST00000592208 MKNK2Q9HBH9 465 aa17.09■□□□□ 0.33
RAVER1-204ENST00000592208 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
RAVER1-204ENST00000592208 IP6K1Q92551 441 aa17.09■□□□□ 0.33
RAVER1-204ENST00000592208 POLR3DP05423 398 aaPredicted RBP17.09■□□□□ 0.33
RAVER1-204ENST00000592208 BMP2KLQ5H9B9 411 aa17.09■□□□□ 0.33
RAVER1-204ENST00000592208 CWC15Q9P013 229 aaKnown RBP17.09■□□□□ 0.33
RAVER1-204ENST00000592208 HOXC9P31274 260 aa17.08■□□□□ 0.33
RAVER1-204ENST00000592208 ERLIN1O75477 346 aa17.08■□□□□ 0.32
RAVER1-204ENST00000592208 C8orf58Q8NAV2 365 aa17.08■□□□□ 0.32
RAVER1-204ENST00000592208 PYM1Q9BRP8 204 aaKnown RBP17.08■□□□□ 0.32
RAVER1-204ENST00000592208 HMG20BQ9P0W2 317 aa17.08■□□□□ 0.32
RAVER1-204ENST00000592208 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.32
RAVER1-204ENST00000592208 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
RAVER1-204ENST00000592208 ZNF213O14771 459 aa17.08■□□□□ 0.32
RAVER1-204ENST00000592208 SPTY2D1Q68D10 685 aaPredicted RBP17.08■□□□□ 0.32
RAVER1-204ENST00000592208 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
RAVER1-204ENST00000592208 ARHGEF5Q12774 1597 aa17.08■□□□□ 0.32
RAVER1-204ENST00000592208 YEATS2Q9ULM3 1422 aa17.07■□□□□ 0.32
RAVER1-204ENST00000592208 TRIM21P19474 475 aaKnown RBP17.07■□□□□ 0.32
RAVER1-204ENST00000592208 ZHX3Q9H4I2 956 aa17.07■□□□□ 0.32
RAVER1-204ENST00000592208 FGFR1OPO95684 399 aaKnown RBP17.07■□□□□ 0.32
RAVER1-204ENST00000592208 ZNF444Q8N0Y2 327 aaPredicted RBP17.07■□□□□ 0.32
RAVER1-204ENST00000592208 PHACTR3Q96KR7 559 aa17.07■□□□□ 0.32
RAVER1-204ENST00000592208 SOS1Q07889 1333 aaPredicted RBP17.07■□□□□ 0.32
RAVER1-204ENST00000592208 PARD3Q8TEW0 1356 aa17.07■□□□□ 0.32
RAVER1-204ENST00000592208 TMEM2Q9UHN6 1383 aa17.07■□□□□ 0.32
RAVER1-204ENST00000592208 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
RAVER1-204ENST00000592208 UQCRFS1P1P0C7P4 283 aa17.07■□□□□ 0.32
RAVER1-204ENST00000592208 TANGO6Q9C0B7 1094 aa17.07■□□□□ 0.32
RAVER1-204ENST00000592208 GRPEL1Q9HAV7 217 aa17.07■□□□□ 0.32
RAVER1-204ENST00000592208 LTKP29376 864 aa17.06■□□□□ 0.32
RAVER1-204ENST00000592208 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
RAVER1-204ENST00000592208 CRACR2BQ8N4Y2 399 aaPredicted RBP17.06■□□□□ 0.32
RAVER1-204ENST00000592208 KRI1Q8N9T8 703 aaKnown RBP17.06■□□□□ 0.32
RAVER1-204ENST00000592208 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
RAVER1-204ENST00000592208 SNRKQ9NRH2 765 aa17.06■□□□□ 0.32
RAVER1-204ENST00000592208 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
RAVER1-204ENST00000592208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.324e-6■■■■□ 23.1
RAVER1-204ENST00000592208 PRPF40BQ6NWY9 871 aaKnown RBP17.06■□□□□ 0.32
RAVER1-204ENST00000592208 ANO10Q9NW15 660 aa17.06■□□□□ 0.32
RAVER1-204ENST00000592208 ALDH1L1O75891 902 aa17.06■□□□□ 0.32
RAVER1-204ENST00000592208 TRAF1Q13077 416 aa17.06■□□□□ 0.32
RAVER1-204ENST00000592208 SKAP1Q86WV1 359 aa17.06■□□□□ 0.32
RAVER1-204ENST00000592208 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.32
RAVER1-204ENST00000592208 EHMT1Q9H9B1 1298 aa17.06■□□□□ 0.32
RAVER1-204ENST00000592208 MPHOSPH10O00566 681 aaKnown RBP17.05■□□□□ 0.32
RAVER1-204ENST00000592208 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
RAVER1-204ENST00000592208 C8orf76Q96K31 380 aa17.05■□□□□ 0.32
RAVER1-204ENST00000592208 ZFYP08048 801 aaPredicted RBP17.05■□□□□ 0.32
RAVER1-204ENST00000592208 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
RAVER1-204ENST00000592208 CCDC112Q8NEF3 446 aa17.05■□□□□ 0.32
RAVER1-204ENST00000592208 PIBF1Q8WXW3 757 aa17.05■□□□□ 0.32
RAVER1-204ENST00000592208 MYO5CQ9NQX4 1742 aa17.05■□□□□ 0.32
RAVER1-204ENST00000592208 CCDC181Q5TID7 509 aa17.05■□□□□ 0.32
RAVER1-204ENST00000592208 MEIS3Q99687 375 aa17.05■□□□□ 0.32
RAVER1-204ENST00000592208 CAVIN2O95810 425 aa17.04■□□□□ 0.32
RAVER1-204ENST00000592208 BAG3O95817 575 aa17.04■□□□□ 0.32
RAVER1-204ENST00000592208 POTEJP0CG39 1038 aa17.04■□□□□ 0.32
RAVER1-204ENST00000592208 CCDC178Q5BJE1 867 aa17.04■□□□□ 0.32
RAVER1-204ENST00000592208 ZNF397Q8NF99 534 aaPredicted RBP17.04■□□□□ 0.32
RAVER1-204ENST00000592208 MAST1Q9Y2H9 1570 aa17.04■□□□□ 0.32
RAVER1-204ENST00000592208 SETDB2Q96T68 719 aa17.04■□□□□ 0.32
RAVER1-204ENST00000592208 SLAIN2Q9P270 581 aa17.04■□□□□ 0.32
RAVER1-204ENST00000592208 SSBP05455 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
RAVER1-204ENST00000592208 KIF5BP33176 963 aa17.03■□□□□ 0.32
RAVER1-204ENST00000592208 SLC12A7Q9Y666 1083 aa17.03■□□□□ 0.32
RAVER1-204ENST00000592208 CFAP65Q6ZU64 1925 aaKnown RBP17.03■□□□□ 0.32
RAVER1-204ENST00000592208 MLH3Q9UHC1 1453 aa17.03■□□□□ 0.32
RAVER1-204ENST00000592208 GOLGA6L10A6NI86 522 aa17.03■□□□□ 0.32
RAVER1-204ENST00000592208 CETN2P41208 172 aa17.03■□□□□ 0.32
RAVER1-204ENST00000592208 SIRT1Q96EB6 747 aa17.03■□□□□ 0.32
RAVER1-204ENST00000592208 TMEM266Q2M3C6 531 aa17.03■□□□□ 0.32
RAVER1-204ENST00000592208 KSR2Q6VAB6 950 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms