RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 LINC00114Q6XXX2 140 aa7.65□□□□□ -1.18
TPM4-214ENST00000591645 STAG2Q8N3U4 1231 aa7.65□□□□□ -1.18
TPM4-214ENST00000591645 TSEN2Q8NCE0 465 aaKnown RBP7.65□□□□□ -1.18
TPM4-214ENST00000591645 ZNF777Q9ULD5 760 aaPredicted RBP7.65□□□□□ -1.18
TPM4-214ENST00000591645 USP17L15C9J2P7 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L10C9JJH3 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L13C9JLJ4 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L12C9JPN9 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L11C9JVI0 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L21D6R901 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L18D6R9N7 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L22D6RA61 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L17D6RBQ6 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L19D6RCP7 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L20D6RJB6 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 ATXN7O15265 892 aaPredicted RBP7.64□□□□□ -1.19
TPM4-214ENST00000591645 FAM157BP0CG42 384 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 LMOD1P29536 600 aaPredicted RBP7.64□□□□□ -1.19
TPM4-214ENST00000591645 TXLNAP40222 546 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 USP17L24Q0WX57 530 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 GRIN2CQ14957 1233 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 ARSJQ5FYB0 599 aaPredicted RBP7.64□□□□□ -1.19
TPM4-214ENST00000591645 C1orf53Q5VUE5 145 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 C7orf43Q8WVR3 580 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 PARP3Q9Y6F1 533 aa7.64□□□□□ -1.19
TPM4-214ENST00000591645 K7ELQ4 463 aaPredicted RBP7.63□□□□□ -1.19
TPM4-214ENST00000591645 TBCELQ5QJ74 424 aa7.63□□□□□ -1.19
TPM4-214ENST00000591645 FAM182BQ5T319 152 aa7.63□□□□□ -1.19
TPM4-214ENST00000591645 SLCO4C1Q6ZQN7 724 aa7.63□□□□□ -1.19
TPM4-214ENST00000591645 ZMYND15Q9H091 742 aa7.63□□□□□ -1.19
TPM4-214ENST00000591645 ZNF232Q9UNY5 417 aa7.63□□□□□ -1.19
TPM4-214ENST00000591645 C21orf2O43822 256 aa7.62□□□□□ -1.19
TPM4-214ENST00000591645 FURINP09958 794 aa7.62□□□□□ -1.19
TPM4-214ENST00000591645 TNP2Q05952 138 aa7.62□□□□□ -1.19
TPM4-214ENST00000591645 LAMC2Q13753 1193 aa7.62□□□□□ -1.19
TPM4-214ENST00000591645 BICDL1Q6ZP65 573 aa7.62□□□□□ -1.19
TPM4-214ENST00000591645 ANKMY2Q8IV38 441 aa7.62□□□□□ -1.19
TPM4-214ENST00000591645 BTBD6Q96KE9 485 aa7.62□□□□□ -1.19
TPM4-214ENST00000591645 HCN2Q9UL51 889 aa7.62□□□□□ -1.19
TPM4-214ENST00000591645 CHMP3Q9Y3E7 222 aa7.62□□□□□ -1.19
TPM4-214ENST00000591645 EFSO43281 561 aa7.61□□□□□ -1.19
TPM4-214ENST00000591645 EPXP11678 715 aa7.61□□□□□ -1.19
TPM4-214ENST00000591645 DPYDQ12882 1025 aa7.61□□□□□ -1.19
TPM4-214ENST00000591645 SH3PXD2AQ5TCZ1 1133 aa7.61□□□□□ -1.19
TPM4-214ENST00000591645 ALYREFQ86V81 257 aaKnown RBP7.61□□□□□ -1.19
TPM4-214ENST00000591645 ARXQ96QS3 562 aa7.61□□□□□ -1.19
TPM4-214ENST00000591645 GJA3Q9Y6H8 435 aa7.61□□□□□ -1.19
TPM4-214ENST00000591645 NEURL1BA8MQ27 555 aa7.6□□□□□ -1.19
TPM4-214ENST00000591645 PPP1R12BO60237 982 aaPredicted RBP7.6□□□□□ -1.19
TPM4-214ENST00000591645 ARAFP10398 606 aa7.6□□□□□ -1.19
TPM4-214ENST00000591645 MAPTP10636 758 aaKnown RBP7.6□□□□□ -1.19
TPM4-214ENST00000591645 C2orf49Q9BVC5 232 aaPredicted RBP7.6□□□□□ -1.19
TPM4-214ENST00000591645 AVENQ9NQS1 362 aaPredicted RBP7.6□□□□□ -1.19
TPM4-214ENST00000591645 GTF3C3Q9Y5Q9 886 aa7.6□□□□□ -1.19
TPM4-214ENST00000591645 ATAD2Q6PL18 1390 aa7.59□□□□□ -1.19
TPM4-214ENST00000591645 DCDC2BA2VCK2 349 aa7.59□□□□□ -1.19
TPM4-214ENST00000591645 IGFBP4P22692 258 aa7.59□□□□□ -1.19
TPM4-214ENST00000591645 RHPN1Q8TCX5 695 aa7.59□□□□□ -1.19
TPM4-214ENST00000591645 KLF15Q9UIH9 416 aa7.59□□□□□ -1.19
TPM4-214ENST00000591645 C1QTNF9BB2RNN3 333 aa7.58□□□□□ -1.2
TPM4-214ENST00000591645 GNB5O14775 395 aa7.58□□□□□ -1.2
TPM4-214ENST00000591645 PHACTR1Q9C0D0 580 aa7.58□□□□□ -1.2
TPM4-214ENST00000591645 KHNYNO15037 678 aaKnown RBP7.57□□□□□ -1.2
TPM4-214ENST00000591645 CD33P20138 364 aa7.57□□□□□ -1.2
TPM4-214ENST00000591645 DGKGP49619 791 aa7.57□□□□□ -1.2
TPM4-214ENST00000591645 LRRC69Q6ZNQ3 347 aa7.57□□□□□ -1.2
TPM4-214ENST00000591645 CD163Q86VB7 1156 aa7.57□□□□□ -1.2
TPM4-214ENST00000591645 SCG3Q8WXD2 468 aaKnown RBP7.57□□□□□ -1.2
TPM4-214ENST00000591645 ANKIB1Q9P2G1 1089 aa7.57□□□□□ -1.2
TPM4-214ENST00000591645 PIK3R2O00459 728 aa7.56□□□□□ -1.2
TPM4-214ENST00000591645 ELOAQ14241 798 aaKnown RBP7.56□□□□□ -1.2
TPM4-214ENST00000591645 HIF1AQ16665 826 aa7.56□□□□□ -1.2
TPM4-214ENST00000591645 HINFPQ9BQA5 517 aa7.56□□□□□ -1.2
TPM4-214ENST00000591645 MARK1Q9P0L2 795 aa7.56□□□□□ -1.2
TPM4-214ENST00000591645 ADH6P28332 368 aa7.55□□□□□ -1.2
TPM4-214ENST00000591645 WEE1P30291 646 aa7.55□□□□□ -1.2
TPM4-214ENST00000591645 CHRNA4P43681 627 aa7.55□□□□□ -1.2
TPM4-214ENST00000591645 SRPK2P78362 688 aaKnown RBP7.55□□□□□ -1.2
TPM4-214ENST00000591645 ZNF468Q5VIY5 522 aaPredicted RBP7.55□□□□□ -1.2
TPM4-214ENST00000591645 CHSY3Q70JA7 882 aa7.55□□□□□ -1.2
TPM4-214ENST00000591645 FCHSD1Q86WN1 690 aa7.55□□□□□ -1.2
TPM4-214ENST00000591645 ALDH16A1Q8IZ83 802 aa7.55□□□□□ -1.2
TPM4-214ENST00000591645 NEUROD4Q9HD90 331 aa7.55□□□□□ -1.2
TPM4-214ENST00000591645 HCN4Q9Y3Q4 1203 aa7.55□□□□□ -1.2
TPM4-214ENST00000591645 FOXO3O43524 673 aa7.54□□□□□ -1.2
TPM4-214ENST00000591645 KCNQ4P56696 695 aa7.54□□□□□ -1.2
TPM4-214ENST00000591645 RTN1Q16799 776 aa7.54□□□□□ -1.2
TPM4-214ENST00000591645 SWI5Q1ZZU3 235 aa7.54□□□□□ -1.2
TPM4-214ENST00000591645 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
TPM4-214ENST00000591645 STRN4Q9NRL3 753 aa7.54□□□□□ -1.2
TPM4-214ENST00000591645 NOVA2Q9UNW9 492 aaKnown RBP7.54□□□□□ -1.2
TPM4-214ENST00000591645 TYRO3Q06418 890 aa7.53□□□□□ -1.2
TPM4-214ENST00000591645 IER5Q5VY09 327 aa7.53□□□□□ -1.2
TPM4-214ENST00000591645 Q8N3U1 123 aa7.53□□□□□ -1.2
TPM4-214ENST00000591645 HSH2DQ96JZ2 352 aa7.53□□□□□ -1.2
TPM4-214ENST00000591645 SUSD3Q96L08 255 aa7.53□□□□□ -1.2
TPM4-214ENST00000591645 ATG7O95352 703 aa7.52□□□□□ -1.21
TPM4-214ENST00000591645 RFX1P22670 979 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 204 ms