RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 CRKLP46109 303 aaKnown RBP11.89□□□□□ -0.51
VPS25-205ENST00000590339 EIF4A1P60842 406 aaKnown RBP11.89□□□□□ -0.51
VPS25-205ENST00000590339 DNAJC10Q8IXB1 793 aa11.89□□□□□ -0.51
VPS25-205ENST00000590339 RWDD1Q9H446 243 aaPredicted RBP11.89□□□□□ -0.51
VPS25-205ENST00000590339 WWC3Q9ULE0 1092 aa11.89□□□□□ -0.51
VPS25-205ENST00000590339 TEFQ10587 303 aa11.88□□□□□ -0.51
VPS25-205ENST00000590339 RC3H1Q5TC82 1133 aaKnown RBP11.88□□□□□ -0.51
VPS25-205ENST00000590339 ITGB4P16144 1822 aa11.88□□□□□ -0.51
VPS25-205ENST00000590339 MMP10P09238 476 aa11.87□□□□□ -0.51
VPS25-205ENST00000590339 CCDC30Q5VVM6 783 aa11.87□□□□□ -0.51
VPS25-205ENST00000590339 SMC5Q8IY18 1101 aa11.87□□□□□ -0.51
VPS25-205ENST00000590339 CNTNAP4Q9C0A0 1308 aa11.86□□□□□ -0.51
VPS25-205ENST00000590339 C4BP0C0L5 1744 aa11.86□□□□□ -0.51
VPS25-205ENST00000590339 INTS5Q6P9B9 1019 aaKnown RBP11.86□□□□□ -0.51
VPS25-205ENST00000590339 G2E3Q7L622 706 aa11.86□□□□□ -0.51
VPS25-205ENST00000590339 TTC5Q8N0Z6 440 aa11.86□□□□□ -0.51
VPS25-205ENST00000590339 NLGN1Q8N2Q7 840 aa11.86□□□□□ -0.51
VPS25-205ENST00000590339 BACH2Q9BYV9 841 aa11.86□□□□□ -0.51
VPS25-205ENST00000590339 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
VPS25-205ENST00000590339 BTBD11A6QL63 1104 aa11.85□□□□□ -0.51
VPS25-205ENST00000590339 KCNQ3O43525 872 aa11.85□□□□□ -0.51
VPS25-205ENST00000590339 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
VPS25-205ENST00000590339 STK31Q9BXU1 1019 aa11.85□□□□□ -0.51
VPS25-205ENST00000590339 CD2APQ9Y5K6 639 aa11.85□□□□□ -0.51
VPS25-205ENST00000590339 CYP19A1P11511 503 aaPredicted RBP11.84□□□□□ -0.51
VPS25-205ENST00000590339 GYS1P13807 737 aa11.84□□□□□ -0.51
VPS25-205ENST00000590339 YBX3P16989 372 aaKnown RBP eCLIP11.84□□□□□ -0.511e-6■■□□□ 11.7
VPS25-205ENST00000590339 ADRA2BP18089 450 aa11.84□□□□□ -0.51
VPS25-205ENST00000590339 PDE4AP27815 886 aa11.84□□□□□ -0.51
VPS25-205ENST00000590339 FLIIQ13045 1269 aa11.84□□□□□ -0.51
VPS25-205ENST00000590339 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
VPS25-205ENST00000590339 CCDC87Q9NVE4 849 aa11.84□□□□□ -0.51
VPS25-205ENST00000590339 PDZRN3Q9UPQ7 1066 aa11.84□□□□□ -0.51
VPS25-205ENST00000590339 KCPQ6ZWJ8 1503 aa11.83□□□□□ -0.52
VPS25-205ENST00000590339 ZNF496Q96IT1 587 aaPredicted RBP11.83□□□□□ -0.52
VPS25-205ENST00000590339 CHMP4AQ9BY43 222 aa11.83□□□□□ -0.52
VPS25-205ENST00000590339 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
VPS25-205ENST00000590339 TUBGCP6Q96RT7 1819 aa11.82□□□□□ -0.52
VPS25-205ENST00000590339 ZPR1O75312 459 aa11.82□□□□□ -0.52
VPS25-205ENST00000590339 CCT4P50991 539 aaKnown RBP11.82□□□□□ -0.52
VPS25-205ENST00000590339 C8orf34Q49A92 452 aa11.82□□□□□ -0.52
VPS25-205ENST00000590339 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
VPS25-205ENST00000590339 ZBTB1Q9Y2K1 713 aa11.82□□□□□ -0.52
VPS25-205ENST00000590339 ZNF330Q9Y3S2 320 aaPredicted RBP11.82□□□□□ -0.52
VPS25-205ENST00000590339 GRIN3BO60391 1043 aa11.81□□□□□ -0.52
VPS25-205ENST00000590339 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
VPS25-205ENST00000590339 STARD3NLO95772 234 aa11.81□□□□□ -0.52
VPS25-205ENST00000590339 RGS3P49796 1198 aa11.81□□□□□ -0.52
VPS25-205ENST00000590339 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
VPS25-205ENST00000590339 USPL1Q5W0Q7 1092 aa11.81□□□□□ -0.52
VPS25-205ENST00000590339 SIRT2Q8IXJ6 389 aa11.81□□□□□ -0.52
VPS25-205ENST00000590339 VSIG10Q8N0Z9 540 aa11.81□□□□□ -0.52
VPS25-205ENST00000590339 QSER1Q2KHR3 1735 aa11.8□□□□□ -0.52
VPS25-205ENST00000590339 A0A0G2JLW4 131 aa11.8□□□□□ -0.52
VPS25-205ENST00000590339 ANKRD44Q8N8A2 993 aa11.8□□□□□ -0.52
VPS25-205ENST00000590339 FMNL2Q96PY5 1086 aa11.8□□□□□ -0.52
VPS25-205ENST00000590339 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
VPS25-205ENST00000590339 TAF1LQ8IZX4 1826 aa11.8□□□□□ -0.52
VPS25-205ENST00000590339 ADCY9O60503 1353 aa11.79□□□□□ -0.52
VPS25-205ENST00000590339 IBTKQ9P2D0 1353 aaPredicted RBP11.79□□□□□ -0.52
VPS25-205ENST00000590339 F6X3S4 739 aa11.79□□□□□ -0.52
VPS25-205ENST00000590339 A1BGP04217 495 aa11.79□□□□□ -0.52
VPS25-205ENST00000590339 NUCB1Q02818 461 aa11.79□□□□□ -0.52
VPS25-205ENST00000590339 FKBP5Q13451 457 aaPredicted RBP11.79□□□□□ -0.52
VPS25-205ENST00000590339 ZNF784Q8NCA9 323 aaPredicted RBP11.79□□□□□ -0.52
VPS25-205ENST00000590339 GCC1Q96CN9 775 aa11.79□□□□□ -0.52
VPS25-205ENST00000590339 MEIS3Q99687 375 aa11.79□□□□□ -0.52
VPS25-205ENST00000590339 CHPF2Q9P2E5 772 aa11.79□□□□□ -0.52
VPS25-205ENST00000590339 USP42Q9H9J4 1324 aaKnown RBP11.79□□□□□ -0.52
VPS25-205ENST00000590339 ARFGEF2Q9Y6D5 1785 aa11.79□□□□□ -0.52
VPS25-205ENST00000590339 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
VPS25-205ENST00000590339 CEP85Q6P2H3 762 aa11.78□□□□□ -0.52
VPS25-205ENST00000590339 BICDL1Q6ZP65 573 aa11.78□□□□□ -0.52
VPS25-205ENST00000590339 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
VPS25-205ENST00000590339 NECTIN2Q92692 538 aa11.78□□□□□ -0.52
VPS25-205ENST00000590339 TEX13AQ9BXU3 409 aaPredicted RBP11.78□□□□□ -0.52
VPS25-205ENST00000590339 USP16Q9Y5T5 823 aa11.78□□□□□ -0.52
VPS25-205ENST00000590339 UBR3Q6ZT12 1888 aa11.77□□□□□ -0.53
VPS25-205ENST00000590339 DPEP1P16444 411 aa11.77□□□□□ -0.53
VPS25-205ENST00000590339 PIP4K2AP48426 406 aaPredicted RBP11.77□□□□□ -0.53
VPS25-205ENST00000590339 TGFB2P61812 414 aa11.77□□□□□ -0.53
VPS25-205ENST00000590339 DDR1Q08345 913 aa11.77□□□□□ -0.53
VPS25-205ENST00000590339 NPM2Q86SE8 214 aaKnown RBP11.77□□□□□ -0.53
VPS25-205ENST00000590339 PHAXQ9H814 394 aaKnown RBP11.77□□□□□ -0.53
VPS25-205ENST00000590339 DBF4Q9UBU7 674 aaPredicted RBP11.77□□□□□ -0.53
VPS25-205ENST00000590339 NARFQ9UHQ1 456 aa11.77□□□□□ -0.53
VPS25-205ENST00000590339 TBC1D2BQ9UPU7 963 aa11.77□□□□□ -0.53
VPS25-205ENST00000590339 BCS1LQ9Y276 419 aa11.77□□□□□ -0.53
VPS25-205ENST00000590339 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.53
VPS25-205ENST00000590339 EIF2S2P20042 333 aaKnown RBP11.76□□□□□ -0.53
VPS25-205ENST00000590339 TM4SF1P30408 202 aa11.76□□□□□ -0.53
VPS25-205ENST00000590339 EIF5P55010 431 aaKnown RBP11.76□□□□□ -0.53
VPS25-205ENST00000590339 NFIXQ14938 502 aa11.76□□□□□ -0.53
VPS25-205ENST00000590339 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
VPS25-205ENST00000590339 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
VPS25-205ENST00000590339 GNAI3P08754 354 aa11.75□□□□□ -0.53
VPS25-205ENST00000590339 SNRPA1P09661 255 aaKnown RBP11.75□□□□□ -0.53
VPS25-205ENST00000590339 PDIA6Q15084 440 aa11.75□□□□□ -0.53
VPS25-205ENST00000590339 PROSER3Q2NL68 480 aa11.75□□□□□ -0.53
VPS25-205ENST00000590339 SLC4A10Q6U841 1118 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms