RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 GTF2E1P29083 439 aaPredicted RBP15.72■□□□□ 0.11
TPM4-212ENST00000590180 PDE6BP35913 854 aa15.72■□□□□ 0.11
TPM4-212ENST00000590180 GNAI1P63096 354 aa15.72■□□□□ 0.11
TPM4-212ENST00000590180 ST5P78524 1137 aa15.72■□□□□ 0.11
TPM4-212ENST00000590180 TPTE2Q6XPS3 522 aa15.72■□□□□ 0.11
TPM4-212ENST00000590180 ZNF622Q969S3 477 aaKnown RBP eCLIP15.72■□□□□ 0.11
TPM4-212ENST00000590180 BRIP1Q9BX63 1249 aa15.72■□□□□ 0.11
TPM4-212ENST00000590180 ZBTB3Q9H5J0 574 aa15.72■□□□□ 0.11
TPM4-212ENST00000590180 CHD4Q14839 1912 aa15.72■□□□□ 0.11
TPM4-212ENST00000590180 ERVV-1B6SEH8 477 aa15.71■□□□□ 0.11
TPM4-212ENST00000590180 MBIPQ9NS73 344 aa15.71■□□□□ 0.11
TPM4-212ENST00000590180 KDM3BQ7LBC6 1761 aa15.71■□□□□ 0.11
TPM4-212ENST00000590180 N4BP2Q86UW6 1770 aaPredicted RBP15.71■□□□□ 0.11
TPM4-212ENST00000590180 MAP3K15Q6ZN16 1313 aa15.7■□□□□ 0.1
TPM4-212ENST00000590180 RGL2O15211 777 aa15.7■□□□□ 0.1
TPM4-212ENST00000590180 AIMP1Q12904 312 aaKnown RBP15.7■□□□□ 0.1
TPM4-212ENST00000590180 PDIA6Q15084 440 aa15.7■□□□□ 0.1
TPM4-212ENST00000590180 PROSER3Q2NL68 480 aa15.7■□□□□ 0.1
TPM4-212ENST00000590180 FAM9BQ8IZU0 186 aa15.7■□□□□ 0.1
TPM4-212ENST00000590180 TTLL6Q8N841 843 aa15.7■□□□□ 0.1
TPM4-212ENST00000590180 IFT57Q9NWB7 429 aa15.7■□□□□ 0.1
TPM4-212ENST00000590180 PDZRN3Q9UPQ7 1066 aa15.7■□□□□ 0.1
TPM4-212ENST00000590180 SALL2Q9Y467 1007 aaPredicted RBP15.7■□□□□ 0.1
TPM4-212ENST00000590180 UTRNP46939 3433 aa15.7■□□□□ 0.1
TPM4-212ENST00000590180 KIF13BQ9NQT8 1826 aa15.69■□□□□ 0.1
TPM4-212ENST00000590180 ELL2O00472 640 aaPredicted RBP15.69■□□□□ 0.1
TPM4-212ENST00000590180 ZNF853P0CG23 659 aa15.69■□□□□ 0.1
TPM4-212ENST00000590180 HDGFL1Q5TGJ6 251 aa15.69■□□□□ 0.1
TPM4-212ENST00000590180 DUSP27Q5VZP5 1158 aa15.69■□□□□ 0.1
TPM4-212ENST00000590180 GPTP24298 496 aa15.68■□□□□ 0.1
TPM4-212ENST00000590180 COPS6Q7L5N1 327 aa15.68■□□□□ 0.1
TPM4-212ENST00000590180 XAGE3Q8WTP9 111 aa15.68■□□□□ 0.1
TPM4-212ENST00000590180 DDX21Q9NR30 783 aaKnown RBP eCLIP15.68■□□□□ 0.1
TPM4-212ENST00000590180 AFDNP55196 1824 aaKnown RBP15.67■□□□□ 0.1
TPM4-212ENST00000590180 HOXB7P09629 217 aa15.67■□□□□ 0.1
TPM4-212ENST00000590180 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
TPM4-212ENST00000590180 CHPF2Q9P2E5 772 aa15.67■□□□□ 0.1
TPM4-212ENST00000590180 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
TPM4-212ENST00000590180 LRP10Q7Z4F1 713 aa15.66■□□□□ 0.1
TPM4-212ENST00000590180 WWC1Q8IX03 1113 aa15.66■□□□□ 0.1
TPM4-212ENST00000590180 NYXQ9GZU5 481 aa15.66■□□□□ 0.1
TPM4-212ENST00000590180 CCDC27Q2M243 656 aa15.65■□□□□ 0.1
TPM4-212ENST00000590180 ZNF526Q8TF50 670 aaPredicted RBP15.65■□□□□ 0.1
TPM4-212ENST00000590180 CNKSR1Q969H4 720 aa15.65■□□□□ 0.1
TPM4-212ENST00000590180 MASTLQ96GX5 879 aa15.65■□□□□ 0.1
TPM4-212ENST00000590180 DBF4Q9UBU7 674 aaPredicted RBP15.65■□□□□ 0.1
TPM4-212ENST00000590180 GOLGB1Q14789 3259 aaKnown RBP15.65■□□□□ 0.1
TPM4-212ENST00000590180 SRGNP10124 158 aa15.64■□□□□ 0.09
TPM4-212ENST00000590180 SUSD4Q5VX71 490 aa15.64■□□□□ 0.09
TPM4-212ENST00000590180 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
TPM4-212ENST00000590180 ZNF34Q8IZ26 560 aa15.64■□□□□ 0.09
TPM4-212ENST00000590180 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
TPM4-212ENST00000590180 KIAA1551Q9HCM1 1747 aa15.64■□□□□ 0.09
TPM4-212ENST00000590180 SCN7AQ01118 1682 aa15.63■□□□□ 0.09
TPM4-212ENST00000590180 NRXN2Q9P2S2 1712 aa15.63■□□□□ 0.09
TPM4-212ENST00000590180 LAMB4A4D0S4 1761 aa15.63■□□□□ 0.09
TPM4-212ENST00000590180 ERFEQ4G0M1 354 aa15.63■□□□□ 0.09
TPM4-212ENST00000590180 C9orf131Q5VYM1 1079 aa15.63■□□□□ 0.09
TPM4-212ENST00000590180 STYK1Q6J9G0 422 aa15.63■□□□□ 0.09
TPM4-212ENST00000590180 PPP1R42Q7Z4L9 355 aa15.63■□□□□ 0.09
TPM4-212ENST00000590180 TSR2Q969E8 191 aaKnown RBP15.63■□□□□ 0.09
TPM4-212ENST00000590180 HYPKQ9NX55 129 aa15.63■□□□□ 0.09
TPM4-212ENST00000590180 C21orf2O43822 256 aa15.62■□□□□ 0.09
TPM4-212ENST00000590180 NPR1P16066 1061 aa15.62■□□□□ 0.09
TPM4-212ENST00000590180 PARP10Q53GL7 1025 aa15.62■□□□□ 0.09
TPM4-212ENST00000590180 HSP90AB3PQ58FF7 597 aa15.62■□□□□ 0.09
TPM4-212ENST00000590180 ANKRD13DQ6ZTN6 518 aa15.62■□□□□ 0.09
TPM4-212ENST00000590180 CHMP4AQ9BY43 222 aa15.62■□□□□ 0.09
TPM4-212ENST00000590180 GPBP1L1Q9HC44 474 aaPredicted RBP15.62■□□□□ 0.09
TPM4-212ENST00000590180 ATP10DQ9P241 1426 aa15.61■□□□□ 0.09
TPM4-212ENST00000590180 TCIRG1Q13488 830 aa15.61■□□□□ 0.09
TPM4-212ENST00000590180 NCBP3Q53F19 620 aaKnown RBP15.61■□□□□ 0.09
TPM4-212ENST00000590180 UTP14AQ9BVJ6 771 aaKnown RBP15.61■□□□□ 0.09
TPM4-212ENST00000590180 RNF181Q9P0P0 153 aa15.61■□□□□ 0.09
TPM4-212ENST00000590180 UBN2Q6ZU65 1347 aa15.61■□□□□ 0.09
TPM4-212ENST00000590180 BCORQ6W2J9 1755 aa15.6■□□□□ 0.09
TPM4-212ENST00000590180 CCDC30Q5VVM6 783 aa15.6■□□□□ 0.09
TPM4-212ENST00000590180 WDR63Q8IWG1 891 aa15.6■□□□□ 0.09
TPM4-212ENST00000590180 TSPYL6Q8N831 410 aa15.6■□□□□ 0.09
TPM4-212ENST00000590180 PLBD2Q8NHP8 589 aa15.6■□□□□ 0.09
TPM4-212ENST00000590180 KLRG2A4D1S0 409 aaPredicted RBP15.59■□□□□ 0.09
TPM4-212ENST00000590180 RASSF7Q02833 373 aa15.59■□□□□ 0.09
TPM4-212ENST00000590180 PRPF40BQ6NWY9 871 aaKnown RBP15.59■□□□□ 0.09
TPM4-212ENST00000590180 RIC3Q7Z5B4 369 aa15.59■□□□□ 0.09
TPM4-212ENST00000590180 ZNF428Q96B54 188 aa15.59■□□□□ 0.09
TPM4-212ENST00000590180 IL16Q14005 1332 aa15.59■□□□□ 0.09
TPM4-212ENST00000590180 TCERG1O14776 1098 aaKnown RBP15.58■□□□□ 0.08
TPM4-212ENST00000590180 NTSR2O95665 410 aa15.58■□□□□ 0.08
TPM4-212ENST00000590180 ALDH1B1P30837 517 aa15.58■□□□□ 0.08
TPM4-212ENST00000590180 NLRP10Q86W26 655 aa15.58■□□□□ 0.08
TPM4-212ENST00000590180 NLRP3Q96P20 1036 aa15.58■□□□□ 0.08
TPM4-212ENST00000590180 PHAXQ9H814 394 aaKnown RBP15.58■□□□□ 0.08
TPM4-212ENST00000590180 TRMT112Q9UI30 125 aaKnown RBP15.58■□□□□ 0.08
TPM4-212ENST00000590180 NUP98P52948 1817 aa15.58■□□□□ 0.08
TPM4-212ENST00000590180 BRCA1P38398 1863 aaKnown RBP15.57■□□□□ 0.08
TPM4-212ENST00000590180 ATP5J2-PTCD1G3V325 749 aa15.57■□□□□ 0.08
TPM4-212ENST00000590180 GOLGA2Q08379 1002 aa15.57■□□□□ 0.08
TPM4-212ENST00000590180 TWISTNBQ3B726 338 aaPredicted RBP15.57■□□□□ 0.08
TPM4-212ENST00000590180 RPGRQ92834 1020 aaKnown RBP15.57■□□□□ 0.08
TPM4-212ENST00000590180 ANKRD31Q8N7Z5 1873 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms