RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 KIAA1551Q9HCM1 1747 aa21.28■■□□□ 1
DNMT1-221ENST00000589538 PDIA6Q15084 440 aa21.27■■□□□ 1
DNMT1-221ENST00000589538 DIEXFQ68CQ4 756 aaKnown RBP21.27■■□□□ 1
DNMT1-221ENST00000589538 PDZRN3Q9UPQ7 1066 aa21.27■■□□□ 1
DNMT1-221ENST00000589538 N4BP2Q86UW6 1770 aaPredicted RBP21.27■■□□□ 1
DNMT1-221ENST00000589538 NPHP1O15259 732 aa21.26■□□□□ 0.99
DNMT1-221ENST00000589538 DBF4Q9UBU7 674 aaPredicted RBP21.26■□□□□ 0.99
DNMT1-221ENST00000589538 NUP98P52948 1817 aa21.25■□□□□ 0.99
DNMT1-221ENST00000589538 A0A0G2JLW4 131 aa21.25■□□□□ 0.99
DNMT1-221ENST00000589538 LRP10Q7Z4F1 713 aa21.25■□□□□ 0.99
DNMT1-221ENST00000589538 NECTIN2Q92692 538 aa21.25■□□□□ 0.99
DNMT1-221ENST00000589538 NIP7Q9Y221 180 aaKnown RBP eCLIP21.25■□□□□ 0.99
DNMT1-221ENST00000589538 DPEP1P16444 411 aa21.24■□□□□ 0.99
DNMT1-221ENST00000589538 ST5P78524 1137 aa21.24■□□□□ 0.99
DNMT1-221ENST00000589538 TTLL7Q6ZT98 887 aa21.24■□□□□ 0.99
DNMT1-221ENST00000589538 CNBD1Q8NA66 436 aa21.24■□□□□ 0.99
DNMT1-221ENST00000589538 CHD4Q14839 1912 aa21.23■□□□□ 0.99
DNMT1-221ENST00000589538 ATP10DQ9P241 1426 aa21.23■□□□□ 0.99
DNMT1-221ENST00000589538 SENP3-EIF4A1A0A087X0R7 540 aa21.23■□□□□ 0.99
DNMT1-221ENST00000589538 YBX3P16989 372 aaKnown RBP eCLIP21.23■□□□□ 0.99
DNMT1-221ENST00000589538 HLFQ16534 295 aa21.23■□□□□ 0.99
DNMT1-221ENST00000589538 PROSER3Q2NL68 480 aa21.23■□□□□ 0.99
DNMT1-221ENST00000589538 GIGYF2Q6Y7W6 1299 aaKnown RBP21.23■□□□□ 0.99
DNMT1-221ENST00000589538 NBPF5PQ86XG9 351 aaPredicted RBP21.23■□□□□ 0.99
DNMT1-221ENST00000589538 BRIP1Q9BX63 1249 aa21.23■□□□□ 0.99
DNMT1-221ENST00000589538 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
DNMT1-221ENST00000589538 CHPF2Q9P2E5 772 aa21.23■□□□□ 0.99
DNMT1-221ENST00000589538 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
DNMT1-221ENST00000589538 BRCA1P38398 1863 aaKnown RBP21.22■□□□□ 0.99
DNMT1-221ENST00000589538 PDE6BP35913 854 aa21.22■□□□□ 0.99
DNMT1-221ENST00000589538 PRR5LQ6MZQ0 368 aa21.22■□□□□ 0.99
DNMT1-221ENST00000589538 TPTE2Q6XPS3 522 aa21.22■□□□□ 0.99
DNMT1-221ENST00000589538 COPS6Q7L5N1 327 aa21.22■□□□□ 0.99
DNMT1-221ENST00000589538 NYXQ9GZU5 481 aa21.22■□□□□ 0.99
DNMT1-221ENST00000589538 ZBTB3Q9H5J0 574 aa21.22■□□□□ 0.99
DNMT1-221ENST00000589538 PIM2Q9P1W9 311 aa21.22■□□□□ 0.99
DNMT1-221ENST00000589538 ANXA1P04083 346 aa21.21■□□□□ 0.99
DNMT1-221ENST00000589538 CCDC30Q5VVM6 783 aa21.21■□□□□ 0.99
DNMT1-221ENST00000589538 C8orf58Q8NAV2 365 aa21.21■□□□□ 0.99
DNMT1-221ENST00000589538 XAGE3Q8WTP9 111 aa21.21■□□□□ 0.99
DNMT1-221ENST00000589538 TSR2Q969E8 191 aaKnown RBP21.21■□□□□ 0.99
DNMT1-221ENST00000589538 H0YIN7 160 aa21.2■□□□□ 0.98
DNMT1-221ENST00000589538 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
DNMT1-221ENST00000589538 KCNA3P22001 575 aa21.2■□□□□ 0.98
DNMT1-221ENST00000589538 HSP90AB3PQ58FF7 597 aa21.2■□□□□ 0.98
DNMT1-221ENST00000589538 YY1P25490 414 aa21.19■□□□□ 0.98
DNMT1-221ENST00000589538 AIMP1Q12904 312 aaKnown RBP21.19■□□□□ 0.98
DNMT1-221ENST00000589538 BCS1LQ9Y276 419 aa21.19■□□□□ 0.98
DNMT1-221ENST00000589538 IBTKQ9P2D0 1353 aaPredicted RBP21.19■□□□□ 0.98
DNMT1-221ENST00000589538 DLEC1Q9Y238 1755 aa21.18■□□□□ 0.98
DNMT1-221ENST00000589538 CHRNA5P30532 468 aa21.18■□□□□ 0.98
DNMT1-221ENST00000589538 GOLGA2Q08379 1002 aa21.18■□□□□ 0.98
DNMT1-221ENST00000589538 DALRD3Q5D0E6 543 aaKnown RBP21.18■□□□□ 0.98
DNMT1-221ENST00000589538 C2CD5Q86YS7 1000 aa21.18■□□□□ 0.98
DNMT1-221ENST00000589538 MYH16Q9H6N6 1097 aa21.18■□□□□ 0.98
DNMT1-221ENST00000589538 FANCIQ9NVI1 1328 aa21.18■□□□□ 0.98
DNMT1-221ENST00000589538 ANKRD31Q8N7Z5 1873 aa21.18■□□□□ 0.98
DNMT1-221ENST00000589538 GTF2E1P29083 439 aaPredicted RBP21.17■□□□□ 0.98
DNMT1-221ENST00000589538 TWISTNBQ3B726 338 aaPredicted RBP21.17■□□□□ 0.98
DNMT1-221ENST00000589538 PARP10Q53GL7 1025 aa21.17■□□□□ 0.98
DNMT1-221ENST00000589538 PPP1R42Q7Z4L9 355 aa21.17■□□□□ 0.98
DNMT1-221ENST00000589538 ZNF34Q8IZ26 560 aa21.17■□□□□ 0.98
DNMT1-221ENST00000589538 ARFGEF1Q9Y6D6 1849 aa21.17■□□□□ 0.98
DNMT1-221ENST00000589538 ANKRD13DQ6ZTN6 518 aa21.16■□□□□ 0.98
DNMT1-221ENST00000589538 TSPYL6Q8N831 410 aa21.16■□□□□ 0.98
DNMT1-221ENST00000589538 PLBD2Q8NHP8 589 aa21.16■□□□□ 0.98
DNMT1-221ENST00000589538 STK31Q9BXU1 1019 aa21.16■□□□□ 0.98
DNMT1-221ENST00000589538 WWC3Q9ULE0 1092 aa21.16■□□□□ 0.98
DNMT1-221ENST00000589538 ANKRD36CQ5JPF3 1778 aa21.15■□□□□ 0.98
DNMT1-221ENST00000589538 ZNF521Q96K83 1311 aa21.14■□□□□ 0.97
DNMT1-221ENST00000589538 FAM177BA6PVY3 158 aa21.14■□□□□ 0.97
DNMT1-221ENST00000589538 GPTP24298 496 aa21.14■□□□□ 0.97
DNMT1-221ENST00000589538 TCIRG1Q13488 830 aa21.14■□□□□ 0.97
DNMT1-221ENST00000589538 TTLL6Q8N841 843 aa21.14■□□□□ 0.97
DNMT1-221ENST00000589538 GOLGB1Q14789 3259 aaKnown RBP21.14■□□□□ 0.97
DNMT1-221ENST00000589538 RNF123Q5XPI4 1314 aa21.13■□□□□ 0.97
DNMT1-221ENST00000589538 UBN2Q6ZU65 1347 aa21.13■□□□□ 0.97
DNMT1-221ENST00000589538 DDX58O95786 925 aaKnown RBP21.12■□□□□ 0.97
DNMT1-221ENST00000589538 STYK1Q6J9G0 422 aa21.12■□□□□ 0.97
DNMT1-221ENST00000589538 MIER1Q8N108 512 aa21.12■□□□□ 0.97
DNMT1-221ENST00000589538 CCDC24Q8N4L8 307 aa21.12■□□□□ 0.97
DNMT1-221ENST00000589538 MASTLQ96GX5 879 aa21.12■□□□□ 0.97
DNMT1-221ENST00000589538 RIC1Q4ADV7 1423 aa21.12■□□□□ 0.97
DNMT1-221ENST00000589538 CACNA1FO60840 1977 aa21.11■□□□□ 0.97
DNMT1-221ENST00000589538 KLRG2A4D1S0 409 aaPredicted RBP21.11■□□□□ 0.97
DNMT1-221ENST00000589538 SUSD4Q5VX71 490 aa21.11■□□□□ 0.97
DNMT1-221ENST00000589538 CNKSR1Q969H4 720 aa21.11■□□□□ 0.97
DNMT1-221ENST00000589538 ZNF622Q969S3 477 aaKnown RBP eCLIP21.11■□□□□ 0.971e-8■□□□□ 10
DNMT1-221ENST00000589538 UTP14AQ9BVJ6 771 aaKnown RBP21.11■□□□□ 0.97
DNMT1-221ENST00000589538 COL11A2P13942 1736 aaPredicted RBP21.1■□□□□ 0.97
DNMT1-221ENST00000589538 SRGNP10124 158 aa21.1■□□□□ 0.97
DNMT1-221ENST00000589538 EXOSC9Q06265 439 aaKnown RBP21.1■□□□□ 0.97
DNMT1-221ENST00000589538 RIC3Q7Z5B4 369 aa21.1■□□□□ 0.97
DNMT1-221ENST00000589538 UTRNP46939 3433 aa21.1■□□□□ 0.97
DNMT1-221ENST00000589538 E9PSI1 815 aa21.09■□□□□ 0.97
DNMT1-221ENST00000589538 NTSR2O95665 410 aa21.09■□□□□ 0.97
DNMT1-221ENST00000589538 NPR1P16066 1061 aa21.09■□□□□ 0.97
DNMT1-221ENST00000589538 ARHGAP27Q6ZUM4 889 aa21.09■□□□□ 0.97
DNMT1-221ENST00000589538 PHAXQ9H814 394 aaKnown RBP21.09■□□□□ 0.97
DNMT1-221ENST00000589538 SPINK5Q9NQ38 1064 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms