RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 KCNA3P22001 575 aa25.84■■□□□ 1.73
LINC00654-202ENST00000589201 PROSER3Q2NL68 480 aa25.84■■□□□ 1.73
LINC00654-202ENST00000589201 SALL2Q9Y467 1007 aaPredicted RBP25.84■■□□□ 1.73
LINC00654-202ENST00000589201 CARMIL3Q8ND23 1372 aa25.83■■□□□ 1.73
LINC00654-202ENST00000589201 YY1P25490 414 aa25.83■■□□□ 1.73
LINC00654-202ENST00000589201 NCBP3Q53F19 620 aaKnown RBP25.83■■□□□ 1.73
LINC00654-202ENST00000589201 LRP10Q7Z4F1 713 aa25.83■■□□□ 1.73
LINC00654-202ENST00000589201 RGL2O15211 777 aa25.82■■□□□ 1.72
LINC00654-202ENST00000589201 CHRNA5P30532 468 aa25.82■■□□□ 1.72
LINC00654-202ENST00000589201 DUSP27Q5VZP5 1158 aa25.82■■□□□ 1.72
LINC00654-202ENST00000589201 MAP3K15Q6ZN16 1313 aa25.82■■□□□ 1.72
LINC00654-202ENST00000589201 ERVV-1B6SEH8 477 aa25.81■■□□□ 1.72
LINC00654-202ENST00000589201 HOXB7P09629 217 aa25.81■■□□□ 1.72
LINC00654-202ENST00000589201 PRR5LQ6MZQ0 368 aa25.81■■□□□ 1.72
LINC00654-202ENST00000589201 KIF6Q6ZMV9 814 aa25.81■■□□□ 1.72
LINC00654-202ENST00000589201 CCDC24Q8N4L8 307 aa25.81■■□□□ 1.72
LINC00654-202ENST00000589201 NIP7Q9Y221 180 aaKnown RBP eCLIP25.81■■□□□ 1.72
LINC00654-202ENST00000589201 HDGFL1Q5TGJ6 251 aa25.8■■□□□ 1.72
LINC00654-202ENST00000589201 ZBTB3Q9H5J0 574 aa25.8■■□□□ 1.72
LINC00654-202ENST00000589201 ELL2O00472 640 aaPredicted RBP25.79■■□□□ 1.72
LINC00654-202ENST00000589201 DDX21Q9NR30 783 aaKnown RBP eCLIP25.79■■□□□ 1.72
LINC00654-202ENST00000589201 BCS1LQ9Y276 419 aa25.79■■□□□ 1.72
LINC00654-202ENST00000589201 PIM2Q9P1W9 311 aa25.78■■□□□ 1.72
LINC00654-202ENST00000589201 CHPF2Q9P2E5 772 aa25.78■■□□□ 1.72
LINC00654-202ENST00000589201 CHD4Q14839 1912 aa25.78■■□□□ 1.72
LINC00654-202ENST00000589201 CNBD1Q8NA66 436 aa25.77■■□□□ 1.72
LINC00654-202ENST00000589201 C8orf58Q8NAV2 365 aa25.77■■□□□ 1.72
LINC00654-202ENST00000589201 TSR2Q969E8 191 aaKnown RBP25.77■■□□□ 1.72
LINC00654-202ENST00000589201 NPHP1O15259 732 aa25.76■■□□□ 1.71
LINC00654-202ENST00000589201 AIMP1Q12904 312 aaKnown RBP25.76■■□□□ 1.71
LINC00654-202ENST00000589201 COPS6Q7L5N1 327 aa25.76■■□□□ 1.71
LINC00654-202ENST00000589201 NBPF5PQ86XG9 351 aaPredicted RBP25.76■■□□□ 1.71
LINC00654-202ENST00000589201 XAGE3Q8WTP9 111 aa25.76■■□□□ 1.71
LINC00654-202ENST00000589201 BRIP1Q9BX63 1249 aa25.76■■□□□ 1.71
LINC00654-202ENST00000589201 NUP98P52948 1817 aa25.76■■□□□ 1.71
LINC00654-202ENST00000589201 BRCA1P38398 1863 aaKnown RBP25.75■■□□□ 1.71
LINC00654-202ENST00000589201 IL16Q14005 1332 aa25.75■■□□□ 1.71
LINC00654-202ENST00000589201 FAM177BA6PVY3 158 aa25.75■■□□□ 1.71
LINC00654-202ENST00000589201 C2CD5Q86YS7 1000 aa25.75■■□□□ 1.71
LINC00654-202ENST00000589201 DALRD3Q5D0E6 543 aaKnown RBP25.74■■□□□ 1.71
LINC00654-202ENST00000589201 GIGYF2Q6Y7W6 1299 aaKnown RBP25.74■■□□□ 1.71
LINC00654-202ENST00000589201 WDR63Q8IWG1 891 aa25.74■■□□□ 1.71
LINC00654-202ENST00000589201 H0YIN7 160 aa25.73■■□□□ 1.71
LINC00654-202ENST00000589201 ST5P78524 1137 aa25.73■■□□□ 1.71
LINC00654-202ENST00000589201 TPTE2Q6XPS3 522 aa25.73■■□□□ 1.71
LINC00654-202ENST00000589201 DBF4Q9UBU7 674 aaPredicted RBP25.73■■□□□ 1.71
LINC00654-202ENST00000589201 ANKRD31Q8N7Z5 1873 aa25.72■■□□□ 1.71
LINC00654-202ENST00000589201 CCER2I3L3R5 266 aa25.72■■□□□ 1.71
LINC00654-202ENST00000589201 GPTP24298 496 aa25.72■■□□□ 1.71
LINC00654-202ENST00000589201 PDE6BP35913 854 aa25.72■■□□□ 1.71
LINC00654-202ENST00000589201 TSPYL6Q8N831 410 aa25.72■■□□□ 1.71
LINC00654-202ENST00000589201 ZNF34Q8IZ26 560 aa25.71■■□□□ 1.71
LINC00654-202ENST00000589201 ATP10DQ9P241 1426 aa25.71■■□□□ 1.71
LINC00654-202ENST00000589201 HYPKQ9NX55 129 aa25.7■■□□□ 1.7
LINC00654-202ENST00000589201 UBN2Q6ZU65 1347 aa25.69■■□□□ 1.7
LINC00654-202ENST00000589201 PDZRN3Q9UPQ7 1066 aa25.69■■□□□ 1.7
LINC00654-202ENST00000589201 SUSD4Q5VX71 490 aa25.68■■□□□ 1.7
LINC00654-202ENST00000589201 DIEXFQ68CQ4 756 aaKnown RBP25.68■■□□□ 1.7
LINC00654-202ENST00000589201 ARHGAP27Q6ZUM4 889 aa25.68■■□□□ 1.7
LINC00654-202ENST00000589201 GTF2E1P29083 439 aaPredicted RBP25.67■■□□□ 1.7
LINC00654-202ENST00000589201 TTLL6Q8N841 843 aa25.67■■□□□ 1.7
LINC00654-202ENST00000589201 ZNF622Q969S3 477 aaKnown RBP eCLIP25.67■■□□□ 1.7
LINC00654-202ENST00000589201 NYXQ9GZU5 481 aa25.67■■□□□ 1.7
LINC00654-202ENST00000589201 SPINK5Q9NQ38 1064 aaPredicted RBP25.67■■□□□ 1.7
LINC00654-202ENST00000589201 NUTM1Q86Y26 1132 aa25.66■■□□□ 1.7
LINC00654-202ENST00000589201 DLEC1Q9Y238 1755 aa25.66■■□□□ 1.7
LINC00654-202ENST00000589201 FANCIQ9NVI1 1328 aa25.65■■□□□ 1.7
LINC00654-202ENST00000589201 ARFGEF1Q9Y6D6 1849 aa25.65■■□□□ 1.7
LINC00654-202ENST00000589201 CCDC30Q5VVM6 783 aa25.65■■□□□ 1.7
LINC00654-202ENST00000589201 ANKRD13DQ6ZTN6 518 aa25.65■■□□□ 1.7
LINC00654-202ENST00000589201 PHAXQ9H814 394 aaKnown RBP25.65■■□□□ 1.7
LINC00654-202ENST00000589201 SRGNP10124 158 aa25.64■■□□□ 1.7
LINC00654-202ENST00000589201 TCIRG1Q13488 830 aa25.64■■□□□ 1.7
LINC00654-202ENST00000589201 TWISTNBQ3B726 338 aaPredicted RBP25.64■■□□□ 1.7
LINC00654-202ENST00000589201 ERFEQ4G0M1 354 aa25.64■■□□□ 1.7
LINC00654-202ENST00000589201 PARP10Q53GL7 1025 aa25.64■■□□□ 1.7
LINC00654-202ENST00000589201 HSP90AB3PQ58FF7 597 aa25.64■■□□□ 1.7
LINC00654-202ENST00000589201 PLBD2Q8NHP8 589 aa25.64■■□□□ 1.7
LINC00654-202ENST00000589201 CHMP4AQ9BY43 222 aa25.64■■□□□ 1.7
LINC00654-202ENST00000589201 COL11A2P13942 1736 aaPredicted RBP25.63■■□□□ 1.69
LINC00654-202ENST00000589201 KLRG2A4D1S0 409 aaPredicted RBP25.62■■□□□ 1.69
LINC00654-202ENST00000589201 NTSR2O95665 410 aa25.62■■□□□ 1.69
LINC00654-202ENST00000589201 GOLGA2Q08379 1002 aa25.62■■□□□ 1.69
LINC00654-202ENST00000589201 PPP1R42Q7Z4L9 355 aa25.62■■□□□ 1.69
LINC00654-202ENST00000589201 ZNF784Q8NCA9 323 aaPredicted RBP25.62■■□□□ 1.69
LINC00654-202ENST00000589201 TCERG1O14776 1098 aaKnown RBP25.61■■□□□ 1.69
LINC00654-202ENST00000589201 STYK1Q6J9G0 422 aa25.61■■□□□ 1.69
LINC00654-202ENST00000589201 MIER1Q8N108 512 aa25.61■■□□□ 1.69
LINC00654-202ENST00000589201 MASTLQ96GX5 879 aa25.61■■□□□ 1.69
LINC00654-202ENST00000589201 ZNF521Q96K83 1311 aa25.61■■□□□ 1.69
LINC00654-202ENST00000589201 ABCC12Q96J65 1359 aa25.6■■□□□ 1.69
LINC00654-202ENST00000589201 IBTKQ9P2D0 1353 aaPredicted RBP25.6■■□□□ 1.69
LINC00654-202ENST00000589201 EXOSC9Q06265 439 aaKnown RBP25.6■■□□□ 1.69
LINC00654-202ENST00000589201 NLRP10Q86W26 655 aa25.6■■□□□ 1.69
LINC00654-202ENST00000589201 UTP14AQ9BVJ6 771 aaKnown RBP25.6■■□□□ 1.69
LINC00654-202ENST00000589201 CNKSR1Q969H4 720 aa25.59■■□□□ 1.69
LINC00654-202ENST00000589201 NPR1P16066 1061 aa25.58■■□□□ 1.69
LINC00654-202ENST00000589201 RIC3Q7Z5B4 369 aa25.58■■□□□ 1.69
LINC00654-202ENST00000589201 MYH16Q9H6N6 1097 aa25.58■■□□□ 1.69
LINC00654-202ENST00000589201 ZNF219Q9P2Y4 722 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms