RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 NFIXQ14938 502 aa16.31■□□□□ 0.2
RETREG3-203ENST00000585894 HLFQ16534 295 aa16.31■□□□□ 0.2
RETREG3-203ENST00000585894 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
RETREG3-203ENST00000585894 TBC1D9BQ66K14 1250 aa16.3■□□□□ 0.2
RETREG3-203ENST00000585894 XAGE3Q8WTP9 111 aa16.3■□□□□ 0.2
RETREG3-203ENST00000585894 FHDC1Q9C0D6 1143 aaPredicted RBP16.3■□□□□ 0.2
RETREG3-203ENST00000585894 E9PSI1 815 aa16.29■□□□□ 0.2
RETREG3-203ENST00000585894 COPS6Q7L5N1 327 aa16.29■□□□□ 0.2
RETREG3-203ENST00000585894 DBF4Q9UBU7 674 aaPredicted RBP16.29■□□□□ 0.2
RETREG3-203ENST00000585894 VAMP4O75379 141 aa16.28■□□□□ 0.2
RETREG3-203ENST00000585894 TM4SF1P30408 202 aa16.28■□□□□ 0.2
RETREG3-203ENST00000585894 PHAXQ9H814 394 aaKnown RBP16.28■□□□□ 0.2
RETREG3-203ENST00000585894 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
RETREG3-203ENST00000585894 MAP3K15Q6ZN16 1313 aa16.27■□□□□ 0.2
RETREG3-203ENST00000585894 POLRMTO00411 1230 aaKnown RBP16.27■□□□□ 0.19
RETREG3-203ENST00000585894 CCDC30Q5VVM6 783 aa16.27■□□□□ 0.19
RETREG3-203ENST00000585894 PARP3Q9Y6F1 533 aa16.27■□□□□ 0.19
RETREG3-203ENST00000585894 ARFGEF2Q9Y6D5 1785 aa16.27■□□□□ 0.19
RETREG3-203ENST00000585894 ANKRD36CQ5JPF3 1778 aa16.26■□□□□ 0.19
RETREG3-203ENST00000585894 NRXN2Q9P2S2 1712 aa16.26■□□□□ 0.19
RETREG3-203ENST00000585894 TRMT2AQ8IZ69 625 aaKnown RBP16.25■□□□□ 0.19
RETREG3-203ENST00000585894 CCDC24Q8N4L8 307 aa16.25■□□□□ 0.19
RETREG3-203ENST00000585894 ZNF428Q96B54 188 aa16.25■□□□□ 0.19
RETREG3-203ENST00000585894 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
RETREG3-203ENST00000585894 KIF13BQ9NQT8 1826 aa16.25■□□□□ 0.19
RETREG3-203ENST00000585894 N4BP2Q86UW6 1770 aaPredicted RBP16.25■□□□□ 0.19
RETREG3-203ENST00000585894 FAM177BA6PVY3 158 aa16.25■□□□□ 0.19
RETREG3-203ENST00000585894 GPTP24298 496 aa16.25■□□□□ 0.19
RETREG3-203ENST00000585894 G2E3Q7L622 706 aa16.25■□□□□ 0.19
RETREG3-203ENST00000585894 NLGN2Q8NFZ4 835 aa16.25■□□□□ 0.19
RETREG3-203ENST00000585894 SYT17Q9BSW7 474 aa16.25■□□□□ 0.19
RETREG3-203ENST00000585894 CACNA1FO60840 1977 aa16.24■□□□□ 0.19
RETREG3-203ENST00000585894 STK31Q9BXU1 1019 aa16.24■□□□□ 0.19
RETREG3-203ENST00000585894 NIP7Q9Y221 180 aaKnown RBP eCLIP16.24■□□□□ 0.19
RETREG3-203ENST00000585894 ZNF652Q9Y2D9 606 aa16.24■□□□□ 0.19
RETREG3-203ENST00000585894 CARMIL3Q8ND23 1372 aa16.24■□□□□ 0.19
RETREG3-203ENST00000585894 KIAA1551Q9HCM1 1747 aa16.24■□□□□ 0.19
RETREG3-203ENST00000585894 ERVV-1B6SEH8 477 aa16.23■□□□□ 0.19
RETREG3-203ENST00000585894 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
RETREG3-203ENST00000585894 SERPINB2P05120 415 aa16.23■□□□□ 0.19
RETREG3-203ENST00000585894 SETDB2Q96T68 719 aa16.23■□□□□ 0.19
RETREG3-203ENST00000585894 ANKRD31Q8N7Z5 1873 aa16.23■□□□□ 0.19
RETREG3-203ENST00000585894 C10orf71Q711Q0 1435 aa16.23■□□□□ 0.19
RETREG3-203ENST00000585894 CLEC4GQ6UXB4 293 aa16.22■□□□□ 0.19
RETREG3-203ENST00000585894 GIGYF2Q6Y7W6 1299 aaKnown RBP16.22■□□□□ 0.19
RETREG3-203ENST00000585894 ZBED9Q6R2W3 1325 aa16.22■□□□□ 0.19
RETREG3-203ENST00000585894 WWC3Q9ULE0 1092 aa16.22■□□□□ 0.19
RETREG3-203ENST00000585894 UBN2Q6ZU65 1347 aa16.22■□□□□ 0.19
RETREG3-203ENST00000585894 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
RETREG3-203ENST00000585894 ANKRD13DQ6ZTN6 518 aa16.21■□□□□ 0.19
RETREG3-203ENST00000585894 PLBD2Q8NHP8 589 aa16.21■□□□□ 0.19
RETREG3-203ENST00000585894 ATP10DQ9P241 1426 aa16.21■□□□□ 0.19
RETREG3-203ENST00000585894 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
RETREG3-203ENST00000585894 PRR5LQ6MZQ0 368 aa16.19■□□□□ 0.18
RETREG3-203ENST00000585894 ZNF34Q8IZ26 560 aa16.19■□□□□ 0.18
RETREG3-203ENST00000585894 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
RETREG3-203ENST00000585894 ATP5J2-PTCD1G3V325 749 aa16.19■□□□□ 0.18
RETREG3-203ENST00000585894 RIC3Q7Z5B4 369 aa16.19■□□□□ 0.18
RETREG3-203ENST00000585894 NBPF5PQ86XG9 351 aaPredicted RBP16.19■□□□□ 0.18
RETREG3-203ENST00000585894 CHMP4AQ9BY43 222 aa16.19■□□□□ 0.18
RETREG3-203ENST00000585894 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
RETREG3-203ENST00000585894 PXDNLA1KZ92 1463 aa16.18■□□□□ 0.18
RETREG3-203ENST00000585894 COL11A2P13942 1736 aaPredicted RBP16.18■□□□□ 0.18
RETREG3-203ENST00000585894 ADCY9O60503 1353 aa16.18■□□□□ 0.18
RETREG3-203ENST00000585894 TNRC6CQ9HCJ0 1690 aaKnown RBP16.18■□□□□ 0.18
RETREG3-203ENST00000585894 RGL2O15211 777 aa16.18■□□□□ 0.18
RETREG3-203ENST00000585894 NPHP1O15259 732 aa16.18■□□□□ 0.18
RETREG3-203ENST00000585894 FLIIQ13045 1269 aa16.18■□□□□ 0.18
RETREG3-203ENST00000585894 SUSD4Q5VX71 490 aa16.18■□□□□ 0.18
RETREG3-203ENST00000585894 CNBD1Q8NA66 436 aa16.18■□□□□ 0.18
RETREG3-203ENST00000585894 A0A0G2JLW4 131 aa16.17■□□□□ 0.18
RETREG3-203ENST00000585894 PI4KAP2A4QPH2 592 aa16.17■□□□□ 0.18
RETREG3-203ENST00000585894 TCIRG1Q13488 830 aa16.17■□□□□ 0.18
RETREG3-203ENST00000585894 NUTM1Q86Y26 1132 aa16.17■□□□□ 0.18
RETREG3-203ENST00000585894 PI4KAP1Q8N8J0 262 aa16.17■□□□□ 0.18
RETREG3-203ENST00000585894 SSH1Q8WYL5 1049 aa16.17■□□□□ 0.18
RETREG3-203ENST00000585894 MAP3K2Q9Y2U5 619 aa16.17■□□□□ 0.18
RETREG3-203ENST00000585894 CHRNA5P30532 468 aa16.16■□□□□ 0.18
RETREG3-203ENST00000585894 MYD88Q99836 296 aa16.16■□□□□ 0.18
RETREG3-203ENST00000585894 BRCA1P38398 1863 aaKnown RBP16.16■□□□□ 0.18
RETREG3-203ENST00000585894 ABCC12Q96J65 1359 aa16.16■□□□□ 0.18
RETREG3-203ENST00000585894 DPEP1P16444 411 aa16.16■□□□□ 0.18
RETREG3-203ENST00000585894 FKBP5Q13451 457 aaPredicted RBP16.16■□□□□ 0.18
RETREG3-203ENST00000585894 MRPL50Q8N5N7 158 aaKnown RBP16.16■□□□□ 0.18
RETREG3-203ENST00000585894 CACNA1SQ13698 1873 aa16.15■□□□□ 0.18
RETREG3-203ENST00000585894 NTSR2O95665 410 aa16.15■□□□□ 0.18
RETREG3-203ENST00000585894 DDX58O95786 925 aaKnown RBP16.15■□□□□ 0.18
RETREG3-203ENST00000585894 ERFEQ4G0M1 354 aa16.15■□□□□ 0.18
RETREG3-203ENST00000585894 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
RETREG3-203ENST00000585894 NLRP10Q86W26 655 aa16.15■□□□□ 0.18
RETREG3-203ENST00000585894 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
RETREG3-203ENST00000585894 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
RETREG3-203ENST00000585894 F6X3S4 739 aa16.14■□□□□ 0.17
RETREG3-203ENST00000585894 HSP90AB3PQ58FF7 597 aa16.14■□□□□ 0.17
RETREG3-203ENST00000585894 SYNE4Q8N205 404 aa16.14■□□□□ 0.17
RETREG3-203ENST00000585894 ISCA1Q9BUE6 129 aa16.14■□□□□ 0.17
RETREG3-203ENST00000585894 GTF2E1P29083 439 aaPredicted RBP16.14■□□□□ 0.17
RETREG3-203ENST00000585894 ST5P78524 1137 aa16.14■□□□□ 0.17
RETREG3-203ENST00000585894 TPTE2Q6XPS3 522 aa16.14■□□□□ 0.17
RETREG3-203ENST00000585894 SMC4Q9NTJ3 1288 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms