RNA–Protein interactions for RNA: ENST00000585815.5

PRKAR1A-208, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 5

Gene PRKAR1A, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-208	ENST00000585815	TBC1D9B	Q66K14	1250 aa		10.83	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	DBF4	Q9UBU7	674 aa	Predicted RBP	10.83	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	SALL2	Q9Y467	1007 aa	Predicted RBP	10.83	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	AFDN	P55196	1824 aa	Known RBP	10.83	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	NRXN2	Q9P2S2	1712 aa		10.82	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	CCDC30	Q5VVM6	783 aa		10.82	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	CNBD1	Q8NA66	436 aa		10.82	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	NECTIN2	Q92692	538 aa		10.82	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	NYX	Q9GZU5	481 aa		10.82	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	MYH16	Q9H6N6	1097 aa		10.82	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	HYPK	Q9NX55	129 aa		10.82	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	PDE6B	P35913	854 aa		10.81	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	GOLGA2	Q08379	1002 aa		10.81	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	TPTE2	Q6XPS3	522 aa		10.81	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	BRIP1	Q9BX63	1249 aa		10.81	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	NUP98	P52948	1817 aa		10.81	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	PXDNL	A1KZ92	1463 aa		10.81	□□□□□ -0.68
PRKAR1A-208	ENST00000585815		H0YIN7	160 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	GTF2E1	P29083	439 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	PDIA6	Q15084	440 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	KRT24	Q2M2I5	525 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	PARP10	Q53GL7	1025 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	PRR5L	Q6MZQ0	368 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	TTLL7	Q6ZT98	887 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	COPS6	Q7L5N1	327 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	STK31	Q9BXU1	1019 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	ZBTB3	Q9H5J0	574 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	PIM2	Q9P1W9	311 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	CHPF2	Q9P2E5	772 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	ATP10D	Q9P241	1426 aa		10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.8	□□□□□ -0.68
PRKAR1A-208	ENST00000585815		A0A0G2JLW4	131 aa		10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	ELL2	O00472	640 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	DPEP1	P16444	411 aa		10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	AIMP1	Q12904	312 aa	Known RBP	10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	HLF	Q16534	295 aa		10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	TWISTNB	Q3B726	338 aa	Predicted RBP	10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	PPP1R42	Q7Z4L9	355 aa		10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	C8orf58	Q8NAV2	365 aa		10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	XAGE3	Q8WTP9	111 aa		10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	TSR2	Q969E8	191 aa	Known RBP	10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	CHD4	Q14839	1912 aa		10.79	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	SENP3-EIF4A1	A0A087X0R7	540 aa		10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	DDX58	O95786	925 aa	Known RBP	10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	ANXA1	P04083	346 aa		10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	PROSER3	Q2NL68	480 aa		10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	DALRD3	Q5D0E6	543 aa	Known RBP	10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	LRP10	Q7Z4F1	713 aa		10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	C2CD5	Q86YS7	1000 aa		10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	BCS1L	Q9Y276	419 aa		10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	RNF123	Q5XPI4	1314 aa		10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	FANCI	Q9NVI1	1328 aa		10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815	KIAA1551	Q9HCM1	1747 aa		10.78	□□□□□ -0.68
PRKAR1A-208	ENST00000585815		E9PSI1	815 aa		10.77	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	ANKRD13D	Q6ZTN6	518 aa		10.77	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	PLBD2	Q8NHP8	589 aa		10.77	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	ANKRD36C	Q5JPF3	1778 aa		10.77	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	BRCA1	P38398	1863 aa	Known RBP	10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	CACNA1F	O60840	1977 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	DLEC1	Q9Y238	1755 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	FAM177B	A6PVY3	158 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	YBX3	P16989	372 aa	Known RBP eCLIP	10.76	□□□□□ -0.69	2e-6	■■□□□ 11.4
PRKAR1A-208	ENST00000585815	GPT	P24298	496 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	YY1	P25490	414 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	CHRNA5	P30532	468 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	TCIRG1	Q13488	830 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	RIC3	Q7Z5B4	369 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	ZNF34	Q8IZ26	560 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	TTLL6	Q8N841	843 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	CNKSR1	Q969H4	720 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	ARFGEF1	Q9Y6D6	1849 aa		10.76	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	HSP90B1	P14625	803 aa	Known RBP	10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	KCNA3	P22001	575 aa		10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	EXOSC9	Q06265	439 aa	Known RBP	10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	STYK1	Q6J9G0	422 aa		10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	MIER1	Q8N108	512 aa		10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	TSPYL6	Q8N831	410 aa		10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	MASTL	Q96GX5	879 aa		10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	UTP14A	Q9BVJ6	771 aa	Known RBP	10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	GOLGB1	Q14789	3259 aa	Known RBP	10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	ZNF521	Q96K83	1311 aa		10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	RIC1	Q4ADV7	1423 aa		10.75	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	ANKRD31	Q8N7Z5	1873 aa		10.74	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	NPR1	P16066	1061 aa		10.74	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	SOGA3	Q5TF21	947 aa		10.74	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	WWC3	Q9ULE0	1092 aa		10.74	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	UTRN	P46939	3433 aa		10.73	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	VAMP4	O75379	141 aa		10.73	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	NTSR2	O95665	410 aa		10.73	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	SLC4A2	P04920	1241 aa		10.73	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	SRGN	P10124	158 aa		10.73	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	ALDH1B1	P30837	517 aa		10.73	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	NEXN	Q0ZGT2	675 aa		10.73	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	SUSD4	Q5VX71	490 aa		10.73	□□□□□ -0.69
PRKAR1A-208	ENST00000585815	ARHGAP27	Q6ZUM4	889 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms