RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
CSNK1D-222ENST00000584377 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
CSNK1D-222ENST00000584377 PRPF40AO75400 957 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-222ENST00000584377 ERC1Q8IUD2 1116 aa15.98■□□□□ 0.15
CSNK1D-222ENST00000584377 PA2G4Q9UQ80 394 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-222ENST00000584377 LMTK3Q96Q04 1460 aa15.98■□□□□ 0.15
CSNK1D-222ENST00000584377 MST1RQ04912 1400 aa15.98■□□□□ 0.15
CSNK1D-222ENST00000584377 GRM8O00222 908 aa15.98■□□□□ 0.15
CSNK1D-222ENST00000584377 CAVIN1Q6NZI2 390 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-222ENST00000584377 ZNF790Q6PG37 636 aa15.98■□□□□ 0.15
CSNK1D-222ENST00000584377 OFD1O75665 1012 aa15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 SLC39A6Q13433 755 aa15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 FOXD4L5Q5VV16 416 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 CWC27Q6UX04 472 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 FOXD4L4Q8WXT5 416 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 PDIA6Q15084 440 aa15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 ECHDC1Q9NTX5 307 aa15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 NPHP3Q7Z494 1330 aa15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 SIPA1L3O60292 1781 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 IFIT2P09913 472 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 GPATCH3Q96I76 525 aa15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 LSG1Q9H089 658 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
CSNK1D-222ENST00000584377 RGPD5Q99666 1765 aa15.96■□□□□ 0.15
CSNK1D-222ENST00000584377 BRD1O95696 1058 aa15.96■□□□□ 0.15
CSNK1D-222ENST00000584377 TATP17735 454 aaPredicted RBP15.96■□□□□ 0.15
CSNK1D-222ENST00000584377 ATF3P18847 181 aa15.96■□□□□ 0.15
CSNK1D-222ENST00000584377 SUCLG2Q96I99 432 aa15.96■□□□□ 0.15
CSNK1D-222ENST00000584377 MAP7D2Q96T17 732 aa15.96■□□□□ 0.15
CSNK1D-222ENST00000584377 ADAMTS7Q9UKP4 1686 aa15.96■□□□□ 0.15
CSNK1D-222ENST00000584377 CHAMP1Q96JM3 812 aa15.96■□□□□ 0.14
CSNK1D-222ENST00000584377 DIAPH3Q9NSV4 1193 aa15.96■□□□□ 0.14
CSNK1D-222ENST00000584377 RIC3Q7Z5B4 369 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 DDX17Q92841 729 aaKnown RBP15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 BICC1Q9H694 974 aaKnown RBP15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 SNX14Q9Y5W7 946 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 UTYO14607 1347 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 PHKG2P15735 406 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 TERF1P54274 439 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 ZNF445P59923 1031 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 ZSCAN23Q3MJ62 389 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 KAZALD1Q96I82 304 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 FAM13BQ9NYF5 915 aa15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 KDM6AO15550 1401 aaPredicted RBP15.95■□□□□ 0.14
CSNK1D-222ENST00000584377 FGD1P98174 961 aa15.94■□□□□ 0.14
CSNK1D-222ENST00000584377 AACSQ86V21 672 aa15.94■□□□□ 0.14
CSNK1D-222ENST00000584377 ZSCAN30Q86W11 494 aa15.94■□□□□ 0.14
CSNK1D-222ENST00000584377 ALS2Q96Q42 1657 aa15.94■□□□□ 0.14
CSNK1D-222ENST00000584377 CSB-PGBD3P0DP91 1061 aa15.94■□□□□ 0.14
CSNK1D-222ENST00000584377 MYL6BP14649 208 aa15.94■□□□□ 0.14
CSNK1D-222ENST00000584377 GPT2Q8TD30 523 aa15.94■□□□□ 0.14
CSNK1D-222ENST00000584377 RUFY2Q8WXA3 655 aa15.94■□□□□ 0.14
CSNK1D-222ENST00000584377 NASPP49321 788 aaPredicted RBP15.93■□□□□ 0.14
CSNK1D-222ENST00000584377 LARP1Q6PKG0 1096 aaKnown RBP15.93■□□□□ 0.14
CSNK1D-222ENST00000584377 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.93■□□□□ 0.14
CSNK1D-222ENST00000584377 CRYBG1Q9Y4K1 1723 aa15.93■□□□□ 0.14
CSNK1D-222ENST00000584377 IGKV5-2P06315 115 aa15.93■□□□□ 0.14
CSNK1D-222ENST00000584377 NEXNQ0ZGT2 675 aa15.93■□□□□ 0.14
CSNK1D-222ENST00000584377 G3BP1Q13283 466 aaKnown RBP eCLIP15.93■□□□□ 0.14
CSNK1D-222ENST00000584377 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
CSNK1D-222ENST00000584377 IFNL2Q8IZJ0 200 aa15.93■□□□□ 0.14
CSNK1D-222ENST00000584377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.93■□□□□ 0.14
CSNK1D-222ENST00000584377 TMEM94Q12767 1356 aa15.92■□□□□ 0.14
CSNK1D-222ENST00000584377 MEGF6O75095 1541 aa15.92■□□□□ 0.14
CSNK1D-222ENST00000584377 XAGE3Q8WTP9 111 aa15.92■□□□□ 0.14
CSNK1D-222ENST00000584377 SASH1O94885 1247 aa15.92■□□□□ 0.14
CSNK1D-222ENST00000584377 CCDC173Q0VFZ6 552 aa15.92■□□□□ 0.14
CSNK1D-222ENST00000584377 CABLES1Q8TDN4 633 aa15.92■□□□□ 0.14
CSNK1D-222ENST00000584377 EVI5LQ96CN4 794 aa15.92■□□□□ 0.14
CSNK1D-222ENST00000584377 ZNF496Q96IT1 587 aaPredicted RBP15.92■□□□□ 0.14
CSNK1D-222ENST00000584377 COPS6Q7L5N1 327 aa15.91■□□□□ 0.14
CSNK1D-222ENST00000584377 SMAP1Q8IYB5 467 aaPredicted RBP15.91■□□□□ 0.14
CSNK1D-222ENST00000584377 TTC14Q96N46 770 aa15.91■□□□□ 0.14
CSNK1D-222ENST00000584377 NEURL1BA8MQ27 555 aa15.91■□□□□ 0.14
CSNK1D-222ENST00000584377 PPP1R9BQ96SB3 815 aa15.91■□□□□ 0.14
CSNK1D-222ENST00000584377 RBM27Q9P2N5 1060 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-222ENST00000584377 ANP32BQ92688 251 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-222ENST00000584377 EAF2Q96CJ1 260 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-222ENST00000584377 MSNP26038 577 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-222ENST00000584377 AK2P54819 239 aa15.9■□□□□ 0.14
CSNK1D-222ENST00000584377 GCKRQ14397 625 aa15.9■□□□□ 0.14
CSNK1D-222ENST00000584377 CHRNA2Q15822 529 aa15.9■□□□□ 0.14
CSNK1D-222ENST00000584377 TTC5Q8N0Z6 440 aa15.9■□□□□ 0.14
CSNK1D-222ENST00000584377 SIL1Q9H173 461 aa15.9■□□□□ 0.14
CSNK1D-222ENST00000584377 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-222ENST00000584377 SCN11AQ9UI33 1791 aa15.9■□□□□ 0.14
CSNK1D-222ENST00000584377 DCAF5Q96JK2 942 aa15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 MYD88Q99836 296 aa15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 METTL22Q9BUU2 404 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 CCDC8Q9H0W5 538 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 WDR33Q9C0J8 1336 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 MBD3O95983 291 aa15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 SNRPA1P09661 255 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 CASTP20810 708 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 PTH1RQ03431 593 aa15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 LIMCH1Q9UPQ0 1083 aa15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 C5P01031 1676 aa15.89■□□□□ 0.13
CSNK1D-222ENST00000584377 R3HCC1Q9Y3T6 440 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms