RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 SEPT11Q9NVA2 429 aaKnown RBP19■□□□□ 0.63
ERBB2-214ENST00000583038 KIF5BP33176 963 aa18.99■□□□□ 0.63
ERBB2-214ENST00000583038 TMCO3Q6UWJ1 677 aa18.99■□□□□ 0.63
ERBB2-214ENST00000583038 LDHAL6AQ6ZMR3 332 aa18.99■□□□□ 0.63
ERBB2-214ENST00000583038 KRT28Q7Z3Y7 464 aa18.99■□□□□ 0.63
ERBB2-214ENST00000583038 KDM5BQ9UGL1 1544 aa18.99■□□□□ 0.63
ERBB2-214ENST00000583038 CADPS2Q86UW7 1296 aa18.99■□□□□ 0.63
ERBB2-214ENST00000583038 PPP1R1BQ9UD71 204 aaPredicted RBP18.99■□□□□ 0.63
ERBB2-214ENST00000583038 IARSP41252 1262 aaKnown RBP18.99■□□□□ 0.63
ERBB2-214ENST00000583038 CNNM3Q8NE01 707 aa18.99■□□□□ 0.63
ERBB2-214ENST00000583038 PIBF1Q8WXW3 757 aa18.99■□□□□ 0.63
ERBB2-214ENST00000583038 ZFYP08048 801 aaPredicted RBP18.98■□□□□ 0.63
ERBB2-214ENST00000583038 UQCRFS1P1P0C7P4 283 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 TRIM21P19474 475 aaKnown RBP18.98■□□□□ 0.63
ERBB2-214ENST00000583038 ANAPC15P60006 121 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 MAP9Q49MG5 647 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 DNAI2Q9GZS0 605 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 ANKIB1Q9P2G1 1089 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 KANK3Q6NY19 840 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 NEK1Q96PY6 1258 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 ZSCAN16Q9H4T2 348 aaPredicted RBP18.98■□□□□ 0.63
ERBB2-214ENST00000583038 UVSSAQ2YD98 709 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 FSIP1Q8NA03 581 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 CRACR2AQ9BSW2 395 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 ALDH1L1O75891 902 aa18.98■□□□□ 0.63
ERBB2-214ENST00000583038 NUCB1Q02818 461 aa18.97■□□□□ 0.63
ERBB2-214ENST00000583038 KLHL40Q2TBA0 621 aa18.97■□□□□ 0.63
ERBB2-214ENST00000583038 EZRP15311 586 aaKnown RBP18.97■□□□□ 0.63
ERBB2-214ENST00000583038 CACNA2D4Q7Z3S7 1137 aa18.97■□□□□ 0.63
ERBB2-214ENST00000583038 RHPN1Q8TCX5 695 aa18.97■□□□□ 0.63
ERBB2-214ENST00000583038 CLIP2Q9UDT6 1046 aa18.97■□□□□ 0.63
ERBB2-214ENST00000583038 UBE2HP62256 183 aa18.97■□□□□ 0.63
ERBB2-214ENST00000583038 NCOA7Q8NI08 942 aa18.97■□□□□ 0.63
ERBB2-214ENST00000583038 USP16Q9Y5T5 823 aa18.97■□□□□ 0.63
ERBB2-214ENST00000583038 ASXL1Q8IXJ9 1541 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 NLRP5P59047 1200 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 STX1AQ16623 288 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 UBE3BQ7Z3V4 1068 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 GOLGA6L9A6NEM1 432 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 GOLIM4O00461 696 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 USO1O60763 962 aaKnown RBP18.96■□□□□ 0.63
ERBB2-214ENST00000583038 GJB2P29033 226 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 USP8P40818 1118 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 AMPD3Q01432 767 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 SPTY2D1Q68D10 685 aaPredicted RBP18.96■□□□□ 0.63
ERBB2-214ENST00000583038 KLHL10Q6JEL2 608 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 ZBTB3Q9H5J0 574 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 EHMT1Q9H9B1 1298 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 CUL5Q93034 780 aa18.96■□□□□ 0.63
ERBB2-214ENST00000583038 BAG4O95429 457 aaKnown RBP18.95■□□□□ 0.62
ERBB2-214ENST00000583038 ANKRD13DQ6ZTN6 518 aa18.95■□□□□ 0.62
ERBB2-214ENST00000583038 ANKRD44Q8N8A2 993 aa18.95■□□□□ 0.62
ERBB2-214ENST00000583038 ORC3Q9UBD5 711 aaPredicted RBP18.95■□□□□ 0.62
ERBB2-214ENST00000583038 BAG3O95817 575 aa18.95■□□□□ 0.62
ERBB2-214ENST00000583038 CCDC102AQ96A19 550 aa18.95■□□□□ 0.62
ERBB2-214ENST00000583038 PDE4BQ07343 736 aa18.95■□□□□ 0.62
ERBB2-214ENST00000583038 TCP11L1Q9NUJ3 509 aa18.95■□□□□ 0.62
ERBB2-214ENST00000583038 POLR3AO14802 1390 aaPredicted RBP18.95■□□□□ 0.62
ERBB2-214ENST00000583038 YEATS4O95619 227 aa18.95■□□□□ 0.62
ERBB2-214ENST00000583038 KIF4BQ2VIQ3 1234 aa18.94■□□□□ 0.62
ERBB2-214ENST00000583038 BMP15O95972 392 aa18.94■□□□□ 0.62
ERBB2-214ENST00000583038 RPGRQ92834 1020 aaKnown RBP18.94■□□□□ 0.62
ERBB2-214ENST00000583038 TNRQ92752 1358 aa18.94■□□□□ 0.62
ERBB2-214ENST00000583038 CENPHQ9H3R5 247 aa18.94■□□□□ 0.62
ERBB2-214ENST00000583038 GUCY1B3Q02153 619 aa18.93■□□□□ 0.62
ERBB2-214ENST00000583038 TMEM67Q5HYA8 995 aa18.93■□□□□ 0.62
ERBB2-214ENST00000583038 ANKRD24Q8TF21 1146 aa18.93■□□□□ 0.62
ERBB2-214ENST00000583038 FBXO3Q9UK99 471 aa18.93■□□□□ 0.62
ERBB2-214ENST00000583038 DUOX2Q9NRD8 1548 aa18.93■□□□□ 0.62
ERBB2-214ENST00000583038 PAFAH1B1P43034 410 aa18.93■□□□□ 0.62
ERBB2-214ENST00000583038 ENOX2Q16206 610 aaKnown RBP18.93■□□□□ 0.62
ERBB2-214ENST00000583038 PPP4R3AQ6IN85 833 aa18.93■□□□□ 0.62
ERBB2-214ENST00000583038 BIVM-ERCC5R4GMW8 1640 aa18.93■□□□□ 0.62
ERBB2-214ENST00000583038 PIP4K2BP78356 416 aa18.93■□□□□ 0.62
ERBB2-214ENST00000583038 CCDC96Q2M329 555 aa18.93■□□□□ 0.62
ERBB2-214ENST00000583038 URB2Q14146 1524 aaKnown RBP18.93■□□□□ 0.62
ERBB2-214ENST00000583038 MFSD6Q6ZSS7 791 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 TMTC2Q8N394 836 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 PLCH2O75038 1416 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 IGHDP01880 384 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 ZNF165P49910 485 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 LRRC27Q9C0I9 530 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 USP25Q9UHP3 1055 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 MATR3P43243 847 aaKnown RBP eCLIP18.92■□□□□ 0.62
ERBB2-214ENST00000583038 CCT2P78371 535 aaKnown RBP18.92■□□□□ 0.62
ERBB2-214ENST00000583038 CCDC102BQ68D86 513 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 TAX1BP1Q86VP1 789 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 BICRAQ9NZM4 1560 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 CETN1Q12798 172 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 CALML4Q96GE6 196 aa18.92■□□□□ 0.62
ERBB2-214ENST00000583038 URI1O94763 535 aaPredicted RBP18.91■□□□□ 0.62
ERBB2-214ENST00000583038 GBP2P32456 591 aaPredicted RBP18.91■□□□□ 0.62
ERBB2-214ENST00000583038 CKAP2LQ8IYA6 745 aa18.91■□□□□ 0.62
ERBB2-214ENST00000583038 DMRT2Q9Y5R5 561 aa18.91■□□□□ 0.62
ERBB2-214ENST00000583038 METAP2P50579 478 aaKnown RBP eCLIP18.91■□□□□ 0.62
ERBB2-214ENST00000583038 CCDC178Q5BJE1 867 aa18.91■□□□□ 0.62
ERBB2-214ENST00000583038 FAM114A1Q8IWE2 563 aa18.91■□□□□ 0.62
ERBB2-214ENST00000583038 CCDC82Q8N4S0 544 aa18.91■□□□□ 0.62
ERBB2-214ENST00000583038 FAM83GA6ND36 823 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms