RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 SSH3Q8TE77 659 aa16.56■□□□□ 0.24
GGA3-214ENST00000582717 LRRCC1Q9C099 1032 aa16.56■□□□□ 0.24
GGA3-214ENST00000582717 OSBPL3Q9H4L5 887 aa16.56■□□□□ 0.24
GGA3-214ENST00000582717 MAP3K2Q9Y2U5 619 aa16.56■□□□□ 0.24
GGA3-214ENST00000582717 PPP1R42Q7Z4L9 355 aa16.55■□□□□ 0.24
GGA3-214ENST00000582717 PRDM11Q9NQV5 511 aa16.55■□□□□ 0.24
GGA3-214ENST00000582717 POLA2Q14181 598 aa16.54■□□□□ 0.24
GGA3-214ENST00000582717 PDIA6Q15084 440 aa16.54■□□□□ 0.24
GGA3-214ENST00000582717 RBSNQ9H1K0 784 aa16.54■□□□□ 0.24
GGA3-214ENST00000582717 PARP4Q9UKK3 1724 aaKnown RBP16.54■□□□□ 0.24
GGA3-214ENST00000582717 TSHZ3Q63HK5 1081 aa16.54■□□□□ 0.24
GGA3-214ENST00000582717 KSR2Q6VAB6 950 aa16.54■□□□□ 0.24
GGA3-214ENST00000582717 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
GGA3-214ENST00000582717 MAP7D2Q96T17 732 aa16.54■□□□□ 0.24
GGA3-214ENST00000582717 ZMYND15Q9H091 742 aa16.54■□□□□ 0.24
GGA3-214ENST00000582717 HYPKQ9NX55 129 aa16.54■□□□□ 0.24
GGA3-214ENST00000582717 COL5A2P05997 1499 aaPredicted RBP16.53■□□□□ 0.24
GGA3-214ENST00000582717 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
GGA3-214ENST00000582717 WDR17Q8IZU2 1322 aa16.53■□□□□ 0.24
GGA3-214ENST00000582717 MBD3O95983 291 aa16.53■□□□□ 0.24
GGA3-214ENST00000582717 CSPP1Q1MSJ5 1256 aa16.53■□□□□ 0.24
GGA3-214ENST00000582717 NHSL1Q5SYE7 1610 aa16.53■□□□□ 0.24
GGA3-214ENST00000582717 ERC2O15083 957 aa16.52■□□□□ 0.24
GGA3-214ENST00000582717 PRPF40AO75400 957 aaKnown RBP16.52■□□□□ 0.24
GGA3-214ENST00000582717 LRSAM1Q6UWE0 723 aa16.52■□□□□ 0.24
GGA3-214ENST00000582717 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.24
GGA3-214ENST00000582717 PRIM1P49642 420 aaKnown RBP16.52■□□□□ 0.23
GGA3-214ENST00000582717 MCM2P49736 904 aa16.52■□□□□ 0.23
GGA3-214ENST00000582717 PKP1Q13835 747 aa16.52■□□□□ 0.23
GGA3-214ENST00000582717 GLI3P10071 1580 aa16.51■□□□□ 0.23
GGA3-214ENST00000582717 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
GGA3-214ENST00000582717 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
GGA3-214ENST00000582717 MX1P20591 662 aa16.51■□□□□ 0.23
GGA3-214ENST00000582717 CWF19L2Q2TBE0 894 aaKnown RBP16.51■□□□□ 0.23
GGA3-214ENST00000582717 GPT2Q8TD30 523 aa16.51■□□□□ 0.23
GGA3-214ENST00000582717 ZKSCAN5Q9Y2L8 839 aa16.51■□□□□ 0.23
GGA3-214ENST00000582717 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
GGA3-214ENST00000582717 TOM1L2Q6ZVM7 507 aa16.5■□□□□ 0.23
GGA3-214ENST00000582717 ZDHHC9Q9Y397 364 aa16.5■□□□□ 0.23
GGA3-214ENST00000582717 SURF6O75683 361 aaKnown RBP16.5■□□□□ 0.23
GGA3-214ENST00000582717 ZGPATQ8N5A5 531 aaKnown RBP16.5■□□□□ 0.23
GGA3-214ENST00000582717 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
GGA3-214ENST00000582717 CCDC39Q9UFE4 941 aa16.5■□□□□ 0.23
GGA3-214ENST00000582717 MYL6BP14649 208 aa16.48■□□□□ 0.23
GGA3-214ENST00000582717 CABP4P57796 275 aa16.48■□□□□ 0.23
GGA3-214ENST00000582717 TTC5Q8N0Z6 440 aa16.48■□□□□ 0.23
GGA3-214ENST00000582717 SHANK3Q9BYB0 1731 aa16.48■□□□□ 0.23
GGA3-214ENST00000582717 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
GGA3-214ENST00000582717 STAP2Q9UGK3 403 aa16.48■□□□□ 0.23
GGA3-214ENST00000582717 RAB11FIP3O75154 756 aa16.48■□□□□ 0.23
GGA3-214ENST00000582717 DDX58O95786 925 aaKnown RBP16.48■□□□□ 0.23
GGA3-214ENST00000582717 LINS1Q8NG48 757 aa16.48■□□□□ 0.23
GGA3-214ENST00000582717 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.48■□□□□ 0.23
GGA3-214ENST00000582717 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
GGA3-214ENST00000582717 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
GGA3-214ENST00000582717 MTX1Q13505 466 aa16.47■□□□□ 0.23
GGA3-214ENST00000582717 RHPN1Q8TCX5 695 aa16.47■□□□□ 0.23
GGA3-214ENST00000582717 SNRPA1P09661 255 aaKnown RBP16.47■□□□□ 0.23
GGA3-214ENST00000582717 LRP10Q7Z4F1 713 aa16.47■□□□□ 0.23
GGA3-214ENST00000582717 MTERF4Q7Z6M4 381 aaKnown RBP16.47■□□□□ 0.23
GGA3-214ENST00000582717 ZCRB1Q8TBF4 217 aaKnown RBP16.47■□□□□ 0.23
GGA3-214ENST00000582717 XAGE3Q8WTP9 111 aa16.47■□□□□ 0.23
GGA3-214ENST00000582717 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
GGA3-214ENST00000582717 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
GGA3-214ENST00000582717 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
GGA3-214ENST00000582717 R3HCC1Q9Y3T6 440 aaKnown RBP16.47■□□□□ 0.23
GGA3-214ENST00000582717 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
GGA3-214ENST00000582717 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
GGA3-214ENST00000582717 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.23
GGA3-214ENST00000582717 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
GGA3-214ENST00000582717 IGKV5-2P06315 115 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 RIC3Q7Z5B4 369 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 SYAP1Q96A49 352 aaPredicted RBP16.45■□□□□ 0.22
GGA3-214ENST00000582717 GRM8O00222 908 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 MCCP23508 829 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 CUL4AQ13619 759 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 LARP1Q6PKG0 1096 aaKnown RBP16.45■□□□□ 0.22
GGA3-214ENST00000582717 COPS6Q7L5N1 327 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 KIF1BPQ96EK5 621 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 CARD10Q9BWT7 1032 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 UTYO14607 1347 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 AOX1Q06278 1338 aa16.45■□□□□ 0.22
GGA3-214ENST00000582717 SYCE3A1L190 88 aa16.44■□□□□ 0.22
GGA3-214ENST00000582717 BRD1O95696 1058 aa16.44■□□□□ 0.22
GGA3-214ENST00000582717 INTS4Q96HW7 963 aaKnown RBP16.44■□□□□ 0.22
GGA3-214ENST00000582717 KAZALD1Q96I82 304 aa16.44■□□□□ 0.22
GGA3-214ENST00000582717 SUCLG2Q96I99 432 aa16.44■□□□□ 0.22
GGA3-214ENST00000582717 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
GGA3-214ENST00000582717 UBR2Q8IWV8 1755 aa16.44■□□□□ 0.22
GGA3-214ENST00000582717 IL2RBP14784 551 aa16.44■□□□□ 0.22
GGA3-214ENST00000582717 ANAPC15P60006 121 aa16.44■□□□□ 0.22
GGA3-214ENST00000582717 UNC5CLQ8IV45 518 aa16.44■□□□□ 0.22
GGA3-214ENST00000582717 PAPPAQ13219 1627 aa16.43■□□□□ 0.22
GGA3-214ENST00000582717 DYNC1I1O14576 645 aa16.43■□□□□ 0.22
GGA3-214ENST00000582717 ARFGEF2Q9Y6D5 1785 aa16.43■□□□□ 0.22
GGA3-214ENST00000582717 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
GGA3-214ENST00000582717 NEK4P51957 841 aa16.43■□□□□ 0.22
GGA3-214ENST00000582717 RILPL2Q969X0 211 aa16.43■□□□□ 0.22
GGA3-214ENST00000582717 NEURL1BA8MQ27 555 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms