RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ZNF496Q96IT1 587 aaPredicted RBP16.04■□□□□ 0.16
SRSF1-204ENST00000581979 CCDC136Q96JN2 1154 aa16.04■□□□□ 0.16
SRSF1-204ENST00000581979 ZBTB1Q9Y2K1 713 aa16.04■□□□□ 0.16
SRSF1-204ENST00000581979 NOB1Q9ULX3 412 aaKnown RBP16.03■□□□□ 0.16
SRSF1-204ENST00000581979 HEG1Q9ULI3 1381 aa16.03■□□□□ 0.16
SRSF1-204ENST00000581979 IPO8O15397 1037 aaKnown RBP16.02■□□□□ 0.16
SRSF1-204ENST00000581979 ZPR1O75312 459 aa16.02■□□□□ 0.16
SRSF1-204ENST00000581979 STARD3NLO95772 234 aa16.02■□□□□ 0.16
SRSF1-204ENST00000581979 MS4A1P11836 297 aa16.02■□□□□ 0.16
SRSF1-204ENST00000581979 TM4SF1P30408 202 aa16.02■□□□□ 0.16
SRSF1-204ENST00000581979 DDR1Q08345 913 aa16.02■□□□□ 0.16
SRSF1-204ENST00000581979 MRPL50Q8N5N7 158 aaKnown RBP16.02■□□□□ 0.16
SRSF1-204ENST00000581979 NARFQ9UHQ1 456 aa16.02■□□□□ 0.16
SRSF1-204ENST00000581979 COL15A1P39059 1388 aa16.02■□□□□ 0.16
SRSF1-204ENST00000581979 BTBD11A6QL63 1104 aa16.02■□□□□ 0.15
SRSF1-204ENST00000581979 TCERG1O14776 1098 aaKnown RBP16.02■□□□□ 0.15
SRSF1-204ENST00000581979 USPL1Q5W0Q7 1092 aa16.02■□□□□ 0.15
SRSF1-204ENST00000581979 PANK1Q8TE04 598 aa16.02■□□□□ 0.15
SRSF1-204ENST00000581979 TEX13AQ9BXU3 409 aaPredicted RBP16.02■□□□□ 0.15
SRSF1-204ENST00000581979 N4BP2Q86UW6 1770 aaPredicted RBP16.01■□□□□ 0.15
SRSF1-204ENST00000581979 BRPF1P55201 1214 aaPredicted RBP16.01■□□□□ 0.15
SRSF1-204ENST00000581979 FTSJ3Q8IY81 847 aaKnown RBP16.01■□□□□ 0.15
SRSF1-204ENST00000581979 TNNQ9UQP3 1299 aa16.01■□□□□ 0.15
SRSF1-204ENST00000581979 A0A0G2JLW4 131 aa16■□□□□ 0.15
SRSF1-204ENST00000581979 POLRMTO00411 1230 aaKnown RBP16■□□□□ 0.15
SRSF1-204ENST00000581979 EIF5P55010 431 aaKnown RBP16■□□□□ 0.15
SRSF1-204ENST00000581979 ATF7IPQ6VMQ6 1270 aa16■□□□□ 0.15
SRSF1-204ENST00000581979 DZIP1LQ8IYY4 767 aaKnown RBP16■□□□□ 0.15
SRSF1-204ENST00000581979 CLUAP1Q96AJ1 413 aa16■□□□□ 0.15
SRSF1-204ENST00000581979 FMNL2Q96PY5 1086 aa16■□□□□ 0.15
SRSF1-204ENST00000581979 WWC3Q9ULE0 1092 aa16■□□□□ 0.15
SRSF1-204ENST00000581979 COG6Q9Y2V7 657 aa16■□□□□ 0.15
SRSF1-204ENST00000581979 DPEP1P16444 411 aa15.99■□□□□ 0.15
SRSF1-204ENST00000581979 BRCA1P38398 1863 aaKnown RBP15.99■□□□□ 0.15
SRSF1-204ENST00000581979 TRIM27P14373 513 aa15.99■□□□□ 0.15
SRSF1-204ENST00000581979 KCNA3P22001 575 aa15.99■□□□□ 0.15
SRSF1-204ENST00000581979 BCL2L12Q9HB09 334 aa15.99■□□□□ 0.15
SRSF1-204ENST00000581979 ADCY9O60503 1353 aa15.98■□□□□ 0.15
SRSF1-204ENST00000581979 RLBP1P12271 317 aa15.98■□□□□ 0.15
SRSF1-204ENST00000581979 KCNQ3O43525 872 aa15.97■□□□□ 0.15
SRSF1-204ENST00000581979 NFIXQ14938 502 aa15.97■□□□□ 0.15
SRSF1-204ENST00000581979 A0A087WZG4 1122 aa15.97■□□□□ 0.15
SRSF1-204ENST00000581979 IL6STP40189 918 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-204ENST00000581979 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
SRSF1-204ENST00000581979 ARHGAP45Q92619 1136 aa15.97■□□□□ 0.15
SRSF1-204ENST00000581979 BCS1LQ9Y276 419 aa15.97■□□□□ 0.15
SRSF1-204ENST00000581979 NRXN2Q9P2S2 1712 aa15.96■□□□□ 0.15
SRSF1-204ENST00000581979 MVPQ14764 893 aaKnown RBP15.96■□□□□ 0.15
SRSF1-204ENST00000581979 ATP10DQ9P241 1426 aa15.96■□□□□ 0.15
SRSF1-204ENST00000581979 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
SRSF1-204ENST00000581979 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
SRSF1-204ENST00000581979 AFDNP55196 1824 aaKnown RBP15.95■□□□□ 0.14
SRSF1-204ENST00000581979 C1QTNF8P60827 252 aa15.94■□□□□ 0.14
SRSF1-204ENST00000581979 API5Q9BZZ5 524 aaKnown RBP15.94■□□□□ 0.14
SRSF1-204ENST00000581979 PIM2Q9P1W9 311 aa15.94■□□□□ 0.14
SRSF1-204ENST00000581979 CACNA1FO60840 1977 aa15.94■□□□□ 0.14
SRSF1-204ENST00000581979 GIGYF1O75420 1035 aaPredicted RBP15.94■□□□□ 0.14
SRSF1-204ENST00000581979 A1BGP04217 495 aa15.94■□□□□ 0.14
SRSF1-204ENST00000581979 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
SRSF1-204ENST00000581979 ITPRIPQ8IWB1 547 aa15.94■□□□□ 0.14
SRSF1-204ENST00000581979 ARFGEF1Q9Y6D6 1849 aa15.94■□□□□ 0.14
SRSF1-204ENST00000581979 SERPINB2P05120 415 aa15.93■□□□□ 0.14
SRSF1-204ENST00000581979 HOXB7P09629 217 aa15.93■□□□□ 0.14
SRSF1-204ENST00000581979 SNRPA1P09661 255 aaKnown RBP15.93■□□□□ 0.14
SRSF1-204ENST00000581979 AAMPQ13685 434 aa15.93■□□□□ 0.14
SRSF1-204ENST00000581979 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
SRSF1-204ENST00000581979 TMEM57Q8N5G2 664 aa15.93■□□□□ 0.14
SRSF1-204ENST00000581979 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
SRSF1-204ENST00000581979 CHMP4AQ9BY43 222 aa15.93■□□□□ 0.14
SRSF1-204ENST00000581979 USP16Q9Y5T5 823 aa15.93■□□□□ 0.14
SRSF1-204ENST00000581979 SCN7AQ01118 1682 aa15.93■□□□□ 0.14
SRSF1-204ENST00000581979 PTPRCP08575 1304 aa15.92■□□□□ 0.14
SRSF1-204ENST00000581979 CHRNA5P30532 468 aa15.91■□□□□ 0.14
SRSF1-204ENST00000581979 DALRD3Q5D0E6 543 aaKnown RBP15.91■□□□□ 0.14
SRSF1-204ENST00000581979 DDX19BQ9UMR2 479 aa15.91■□□□□ 0.14
SRSF1-204ENST00000581979 TBC1D2BQ9UPU7 963 aa15.91■□□□□ 0.14
SRSF1-204ENST00000581979 PRAMEF22A3QJZ6 481 aa15.91■□□□□ 0.14
SRSF1-204ENST00000581979 EIF2S2P20042 333 aaKnown RBP15.91■□□□□ 0.14
SRSF1-204ENST00000581979 ARHGAP27Q6ZUM4 889 aa15.91■□□□□ 0.14
SRSF1-204ENST00000581979 ABCC4O15439 1325 aa15.9■□□□□ 0.14
SRSF1-204ENST00000581979 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
SRSF1-204ENST00000581979 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
SRSF1-204ENST00000581979 NPM2Q86SE8 214 aaKnown RBP15.9■□□□□ 0.14
SRSF1-204ENST00000581979 GPBP1L1Q9HC44 474 aaPredicted RBP15.9■□□□□ 0.14
SRSF1-204ENST00000581979 ZNF330Q9Y3S2 320 aaPredicted RBP15.9■□□□□ 0.14
SRSF1-204ENST00000581979 BICDL1Q6ZP65 573 aa15.88■□□□□ 0.13
SRSF1-204ENST00000581979 G2E3Q7L622 706 aa15.88■□□□□ 0.13
SRSF1-204ENST00000581979 CARMIL3Q8ND23 1372 aa15.88■□□□□ 0.13
SRSF1-204ENST00000581979 BCORQ6W2J9 1755 aa15.88■□□□□ 0.13
SRSF1-204ENST00000581979 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
SRSF1-204ENST00000581979 DZIP3Q86Y13 1208 aaKnown RBP15.88■□□□□ 0.13
SRSF1-204ENST00000581979 CHMP4BQ9H444 224 aaKnown RBP15.87■□□□□ 0.13
SRSF1-204ENST00000581979 NBPF26B4DH59 902 aa15.86■□□□□ 0.13
SRSF1-204ENST00000581979 RGL2O15211 777 aa15.86■□□□□ 0.13
SRSF1-204ENST00000581979 PIP4K2AP48426 406 aaPredicted RBP15.86■□□□□ 0.13
SRSF1-204ENST00000581979 FLIIQ13045 1269 aa15.86■□□□□ 0.13
SRSF1-204ENST00000581979 NBPF10Q6P3W6 841 aaKnown RBP15.86■□□□□ 0.13
SRSF1-204ENST00000581979 CLEC4GQ6UXB4 293 aa15.86■□□□□ 0.13
SRSF1-204ENST00000581979 NBPF15Q8N660 670 aa15.86■□□□□ 0.13
SRSF1-204ENST00000581979 ZNF526Q8TF50 670 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms