RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 MYL6BP14649 208 aa16.19■□□□□ 0.18
SMARCD2-209ENST00000581832 PROSER3Q2NL68 480 aa16.19■□□□□ 0.18
SMARCD2-209ENST00000581832 ZNF784Q8NCA9 323 aaPredicted RBP16.19■□□□□ 0.18
SMARCD2-209ENST00000581832 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
SMARCD2-209ENST00000581832 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
SMARCD2-209ENST00000581832 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
SMARCD2-209ENST00000581832 MAP3K15Q6ZN16 1313 aa16.19■□□□□ 0.18
SMARCD2-209ENST00000581832 EIF2S2P20042 333 aaKnown RBP16.18■□□□□ 0.18
SMARCD2-209ENST00000581832 CCDC27Q2M243 656 aa16.18■□□□□ 0.18
SMARCD2-209ENST00000581832 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
SMARCD2-209ENST00000581832 NGEFQ8N5V2 710 aa16.18■□□□□ 0.18
SMARCD2-209ENST00000581832 BRIP1Q9BX63 1249 aa16.18■□□□□ 0.18
SMARCD2-209ENST00000581832 IFT57Q9NWB7 429 aa16.18■□□□□ 0.18
SMARCD2-209ENST00000581832 ANXA1P04083 346 aa16.17■□□□□ 0.18
SMARCD2-209ENST00000581832 CCDC24Q8N4L8 307 aa16.17■□□□□ 0.18
SMARCD2-209ENST00000581832 ZNF652Q9Y2D9 606 aa16.17■□□□□ 0.18
SMARCD2-209ENST00000581832 ADCY9O60503 1353 aa16.16■□□□□ 0.18
SMARCD2-209ENST00000581832 HOXB7P09629 217 aa16.16■□□□□ 0.18
SMARCD2-209ENST00000581832 WWC1Q8IX03 1113 aa16.16■□□□□ 0.18
SMARCD2-209ENST00000581832 NIP7Q9Y221 180 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMARCD2-209ENST00000581832 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
SMARCD2-209ENST00000581832 SENP3-EIF4A1A0A087X0R7 540 aa16.15■□□□□ 0.18
SMARCD2-209ENST00000581832 SBF1O95248 1867 aa16.15■□□□□ 0.18
SMARCD2-209ENST00000581832 GNAI1P63096 354 aa16.15■□□□□ 0.18
SMARCD2-209ENST00000581832 DALRD3Q5D0E6 543 aaKnown RBP16.15■□□□□ 0.18
SMARCD2-209ENST00000581832 GIGYF2Q6Y7W6 1299 aaKnown RBP16.15■□□□□ 0.18
SMARCD2-209ENST00000581832 CNBD1Q8NA66 436 aa16.15■□□□□ 0.18
SMARCD2-209ENST00000581832 ATP10DQ9P241 1426 aa16.15■□□□□ 0.18
SMARCD2-209ENST00000581832 KLRG2A4D1S0 409 aaPredicted RBP16.14■□□□□ 0.17
SMARCD2-209ENST00000581832 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
SMARCD2-209ENST00000581832 C2CD5Q86YS7 1000 aa16.14■□□□□ 0.17
SMARCD2-209ENST00000581832 ZNF34Q8IZ26 560 aa16.14■□□□□ 0.17
SMARCD2-209ENST00000581832 NECTIN2Q92692 538 aa16.14■□□□□ 0.17
SMARCD2-209ENST00000581832 ZBTB3Q9H5J0 574 aa16.14■□□□□ 0.17
SMARCD2-209ENST00000581832 DDX21Q9NR30 783 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMARCD2-209ENST00000581832 UBN2Q6ZU65 1347 aa16.14■□□□□ 0.17
SMARCD2-209ENST00000581832 H0YIN7 160 aa16.13■□□□□ 0.17
SMARCD2-209ENST00000581832 PDE6BP35913 854 aa16.13■□□□□ 0.17
SMARCD2-209ENST00000581832 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
SMARCD2-209ENST00000581832 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
SMARCD2-209ENST00000581832 PDZRN3Q9UPQ7 1066 aa16.13■□□□□ 0.17
SMARCD2-209ENST00000581832 SRGNP10124 158 aa16.12■□□□□ 0.17
SMARCD2-209ENST00000581832 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
SMARCD2-209ENST00000581832 KIF6Q6ZMV9 814 aa16.12■□□□□ 0.17
SMARCD2-209ENST00000581832 COPS6Q7L5N1 327 aa16.12■□□□□ 0.17
SMARCD2-209ENST00000581832 TTLL6Q8N841 843 aa16.12■□□□□ 0.17
SMARCD2-209ENST00000581832 CHPF2Q9P2E5 772 aa16.12■□□□□ 0.17
SMARCD2-209ENST00000581832 SLX4Q8IY92 1834 aa16.12■□□□□ 0.17
SMARCD2-209ENST00000581832 ST5P78524 1137 aa16.11■□□□□ 0.17
SMARCD2-209ENST00000581832 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
SMARCD2-209ENST00000581832 ARHGAP27Q6ZUM4 889 aa16.11■□□□□ 0.17
SMARCD2-209ENST00000581832 C8orf58Q8NAV2 365 aa16.11■□□□□ 0.17
SMARCD2-209ENST00000581832 XAGE3Q8WTP9 111 aa16.11■□□□□ 0.17
SMARCD2-209ENST00000581832 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
SMARCD2-209ENST00000581832 ANKRD36CQ5JPF3 1778 aa16.09■□□□□ 0.17
SMARCD2-209ENST00000581832 ARFGEF2Q9Y6D5 1785 aa16.09■□□□□ 0.17
SMARCD2-209ENST00000581832 FAM177BA6PVY3 158 aa16.09■□□□□ 0.17
SMARCD2-209ENST00000581832 GPTP24298 496 aa16.09■□□□□ 0.17
SMARCD2-209ENST00000581832 STYK1Q6J9G0 422 aa16.09■□□□□ 0.17
SMARCD2-209ENST00000581832 TSPYL6Q8N831 410 aa16.09■□□□□ 0.17
SMARCD2-209ENST00000581832 DBF4Q9UBU7 674 aaPredicted RBP16.09■□□□□ 0.17
SMARCD2-209ENST00000581832 IL16Q14005 1332 aa16.09■□□□□ 0.17
SMARCD2-209ENST00000581832 CACNA1SQ13698 1873 aa16.09■□□□□ 0.17
SMARCD2-209ENST00000581832 IBTKQ9P2D0 1353 aaPredicted RBP16.09■□□□□ 0.17
SMARCD2-209ENST00000581832 TNRC6CQ9HCJ0 1690 aaKnown RBP16.08■□□□□ 0.17
SMARCD2-209ENST00000581832 FER1L6Q2WGJ9 1857 aa16.08■□□□□ 0.17
SMARCD2-209ENST00000581832 CCDC88AQ3V6T2 1871 aa16.08■□□□□ 0.17
SMARCD2-209ENST00000581832 ELL2O00472 640 aaPredicted RBP16.08■□□□□ 0.16
SMARCD2-209ENST00000581832 NTSR2O95665 410 aa16.08■□□□□ 0.16
SMARCD2-209ENST00000581832 PRELPP51888 382 aa16.08■□□□□ 0.16
SMARCD2-209ENST00000581832 AIMP1Q12904 312 aaKnown RBP16.08■□□□□ 0.16
SMARCD2-209ENST00000581832 NUTM1Q86Y26 1132 aa16.08■□□□□ 0.16
SMARCD2-209ENST00000581832 FAM9BQ8IZU0 186 aa16.08■□□□□ 0.16
SMARCD2-209ENST00000581832 C7orf43Q8WVR3 580 aa16.08■□□□□ 0.16
SMARCD2-209ENST00000581832 TSR2Q969E8 191 aaKnown RBP16.08■□□□□ 0.16
SMARCD2-209ENST00000581832 ZNF622Q969S3 477 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMARCD2-209ENST00000581832 ABCC12Q96J65 1359 aa16.08■□□□□ 0.16
SMARCD2-209ENST00000581832 CRY2Q49AN0 593 aa16.07■□□□□ 0.16
SMARCD2-209ENST00000581832 ERFEQ4G0M1 354 aa16.07■□□□□ 0.16
SMARCD2-209ENST00000581832 MASTLQ96GX5 879 aa16.07■□□□□ 0.16
SMARCD2-209ENST00000581832 NYXQ9GZU5 481 aa16.07■□□□□ 0.16
SMARCD2-209ENST00000581832 HYPKQ9NX55 129 aa16.07■□□□□ 0.16
SMARCD2-209ENST00000581832 RIC1Q4ADV7 1423 aa16.07■□□□□ 0.16
SMARCD2-209ENST00000581832 NPHP1O15259 732 aa16.06■□□□□ 0.16
SMARCD2-209ENST00000581832 TCIRG1Q13488 830 aa16.06■□□□□ 0.16
SMARCD2-209ENST00000581832 PARP10Q53GL7 1025 aa16.06■□□□□ 0.16
SMARCD2-209ENST00000581832 WDR63Q8IWG1 891 aa16.06■□□□□ 0.16
SMARCD2-209ENST00000581832 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
SMARCD2-209ENST00000581832 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
SMARCD2-209ENST00000581832 NFKBIEO00221 500 aa16.05■□□□□ 0.16
SMARCD2-209ENST00000581832 NPR1P16066 1061 aa16.05■□□□□ 0.16
SMARCD2-209ENST00000581832 C9orf131Q5VYM1 1079 aa16.05■□□□□ 0.16
SMARCD2-209ENST00000581832 ANKRD13DQ6ZTN6 518 aa16.05■□□□□ 0.16
SMARCD2-209ENST00000581832 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
SMARCD2-209ENST00000581832 PLBD2Q8NHP8 589 aa16.05■□□□□ 0.16
SMARCD2-209ENST00000581832 PHAXQ9H814 394 aaKnown RBP16.05■□□□□ 0.16
SMARCD2-209ENST00000581832 SALL2Q9Y467 1007 aaPredicted RBP16.05■□□□□ 0.16
SMARCD2-209ENST00000581832 C21orf2O43822 256 aa16.04■□□□□ 0.16
SMARCD2-209ENST00000581832 RASSF7Q02833 373 aa16.04■□□□□ 0.16
SMARCD2-209ENST00000581832 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms