RNA–Protein interactions for RNA: ENST00000580278.5

CCDC144NL-AS1-213, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 1,819 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-213ENST00000580278 SIK1P57059 783 aa21.11■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 TTLL7Q6ZT98 887 aa21.11■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 UTYO14607 1347 aa21.11■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 UBTFL1P0CB47 393 aaPredicted RBP21.11■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 SMARCC1Q92922 1105 aaPredicted RBP21.11■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 BRWD3Q6RI45 1802 aa21.1■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 COL5A3P25940 1745 aaPredicted RBP21.1■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 GCC1Q96CN9 775 aa21.1■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 LRRFIP2Q9Y608 721 aaKnown RBP21.1■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 NEURL1BA8MQ27 555 aa21.09■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 ZNF772Q68DY9 489 aaPredicted RBP21.09■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 TSHZ2Q9NRE2 1034 aa21.09■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 KCNQ4P56696 695 aa21.08■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 DCTPP1Q9H773 170 aa21.08■□□□□ 0.97
CCDC144NL-AS1-213ENST00000580278 ITPK1Q13572 414 aa21.08■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 ZBTB1Q9Y2K1 713 aa21.08■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 AFDNP55196 1824 aaKnown RBP21.08■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 MYH14Q7Z406 1995 aaKnown RBP21.07■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 NUCB1Q02818 461 aa21.07■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 NEXNQ0ZGT2 675 aa21.07■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 POTEAQ6S8J7 498 aa21.07■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 MYD88Q99836 296 aa21.07■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 RBM6P78332 1123 aaKnown RBP21.06■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 GRM8O00222 908 aa21.06■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 ATP6V1AP38606 617 aa21.06■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 ATP8B2P98198 1209 aa21.06■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 GCKRQ14397 625 aa21.06■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 INTS5Q6P9B9 1019 aaKnown RBP21.06■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 PNMA6EA0A0J9YXQ4 647 aa21.05■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 IL6STP40189 918 aaPredicted RBP21.04■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 RGS3P49796 1198 aa21.04■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 LY75O60449 1722 aa21.04■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 HMMRO75330 724 aa21.04■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 PDE4AP27815 886 aa21.04■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 KRT27Q7Z3Y8 459 aa21.04■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 KAZALD1Q96I82 304 aa21.04■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 C9orf78Q9NZ63 289 aaPredicted RBP21.04■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 CRKLP46109 303 aaKnown RBP21.03■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 MTX1Q13505 466 aa21.03■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 ZBTB3Q9H5J0 574 aa21.03■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 EIF5P55010 431 aaKnown RBP21.02■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 CHD1LQ86WJ1 897 aa21.02■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 SSH3Q8TE77 659 aa21.02■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 CCDC87Q9NVE4 849 aa21.02■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 ZNF330Q9Y3S2 320 aaPredicted RBP21.02■□□□□ 0.96
CCDC144NL-AS1-213ENST00000580278 COL15A1P39059 1388 aa21.02■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 MAP3K15Q6ZN16 1313 aa21.02■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 ATP5J2-PTCD1G3V325 749 aa21.01■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 POLA2Q14181 598 aa21.01■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 RXRBP28702 533 aa21■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 CASP7P55210 303 aa21■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 SUCLG2Q96I99 432 aa21■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 ISCA1Q9BUE6 129 aa21■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 PPP1R42Q7Z4L9 355 aa20.99■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 LINC00116Q8NCU8 138 aa20.99■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 LNPKQ9C0E8 428 aa20.99■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 ANKRD36CQ5JPF3 1778 aa20.99■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 TRIM28Q13263 835 aaKnown RBP20.99■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 TCIRG1Q13488 830 aa20.99■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 ANKRD45Q5TZF3 282 aa20.99■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 KIF6Q6ZMV9 814 aa20.99■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 BCL11BQ9C0K0 894 aaPredicted RBP20.99■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 HDAC5Q9UQL6 1122 aa20.99■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 GIGYF2Q6Y7W6 1299 aaKnown RBP20.98■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 SMIM5Q71RC9 77 aa20.98■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 CCDC191Q8NCU4 936 aa20.98■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 NUP98P52948 1817 aa20.98■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 TAF1LQ8IZX4 1826 aa20.97■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 TRIM37O94972 964 aa20.97■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 FAM196AQ6ZSG2 479 aa20.97■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 CNTNAP4Q9C0A0 1308 aa20.97■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 ERVV-1B6SEH8 477 aa20.97■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 H7C1W4 665 aa20.97■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 HLFQ16534 295 aa20.97■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 CWC25Q9NXE8 425 aaPredicted RBP20.97■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 SRGAP3O43295 1099 aa20.96■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 JARID2Q92833 1246 aaPredicted RBP20.96■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 BICC1Q9H694 974 aaKnown RBP20.96■□□□□ 0.95
CCDC144NL-AS1-213ENST00000580278 A0A087WZG4 1122 aa20.95■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 EPHA10Q5JZY3 1008 aa20.95■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 DZIP3Q86Y13 1208 aaKnown RBP20.95■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 ARXQ96QS3 562 aa20.95■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 UBE3BQ7Z3V4 1068 aa20.94■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 EXOC6BQ9Y2D4 811 aa20.94■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 RABL6Q3YEC7 729 aaPredicted RBP20.94■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 BCORQ6W2J9 1755 aa20.94■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 BACH2Q9BYV9 841 aa20.93■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 RC3H1Q5TC82 1133 aaKnown RBP20.92■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 TBC1D2BQ9UPU7 963 aa20.92■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 NOP58Q9Y2X3 529 aaKnown RBP20.92■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 HSP90AB3PQ58FF7 597 aa20.92■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 CCNL1Q9UK58 526 aaPredicted RBP20.92■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 C8orf34Q49A92 452 aa20.91■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 LRRC4BQ9NT99 713 aa20.9■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 C4BP0C0L5 1744 aa20.9■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 SMARCA5O60264 1052 aaPredicted RBP20.9■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 NLRP10Q86W26 655 aa20.9■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 AMIGO3Q86WK7 504 aa20.9■□□□□ 0.94
CCDC144NL-AS1-213ENST00000580278 FOXO4P98177 505 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms