RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 AIDAQ96BJ3 306 aa15.38■□□□□ 0.05
SUPT4H1-203ENST00000579289 BCORQ6W2J9 1755 aa15.37■□□□□ 0.05
SUPT4H1-203ENST00000579289 FZD9O00144 591 aa15.37■□□□□ 0.05
SUPT4H1-203ENST00000579289 MTHFSDQ2M296 383 aaKnown RBP15.37■□□□□ 0.05
SUPT4H1-203ENST00000579289 MAP1SQ66K74 1059 aaPredicted RBP15.37■□□□□ 0.05
SUPT4H1-203ENST00000579289 CNTROBQ8N137 903 aa15.37■□□□□ 0.05
SUPT4H1-203ENST00000579289 TBC1D2BQ9UPU7 963 aa15.37■□□□□ 0.05
SUPT4H1-203ENST00000579289 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
SUPT4H1-203ENST00000579289 EPHX2P34913 555 aa15.36■□□□□ 0.05
SUPT4H1-203ENST00000579289 MLLT1Q03111 559 aaPredicted RBP15.36■□□□□ 0.05
SUPT4H1-203ENST00000579289 CNKSR1Q969H4 720 aa15.36■□□□□ 0.05
SUPT4H1-203ENST00000579289 MASTLQ96GX5 879 aa15.36■□□□□ 0.05
SUPT4H1-203ENST00000579289 ZNF496Q96IT1 587 aaPredicted RBP15.36■□□□□ 0.05
SUPT4H1-203ENST00000579289 PANK3Q9H999 370 aa15.35■□□□□ 0.05
SUPT4H1-203ENST00000579289 HACL1Q9UJ83 578 aa15.35■□□□□ 0.05
SUPT4H1-203ENST00000579289 HEG1Q9ULI3 1381 aa15.35■□□□□ 0.05
SUPT4H1-203ENST00000579289 IL6STP40189 918 aaPredicted RBP15.34■□□□□ 0.05
SUPT4H1-203ENST00000579289 MAP2K1Q02750 393 aaPredicted RBP15.34■□□□□ 0.05
SUPT4H1-203ENST00000579289 FKBP4Q02790 459 aaKnown RBP eCLIP15.34■□□□□ 0.05
SUPT4H1-203ENST00000579289 CST9Q5W186 159 aa15.34■□□□□ 0.05
SUPT4H1-203ENST00000579289 DDX21Q9NR30 783 aaKnown RBP eCLIP15.34■□□□□ 0.05
SUPT4H1-203ENST00000579289 ZNF277Q9NRM2 450 aaPredicted RBP15.34■□□□□ 0.05
SUPT4H1-203ENST00000579289 RNF123Q5XPI4 1314 aa15.34■□□□□ 0.05
SUPT4H1-203ENST00000579289 A0A087WZG4 1122 aa15.33■□□□□ 0.04
SUPT4H1-203ENST00000579289 EAPPQ56P03 285 aaPredicted RBP15.33■□□□□ 0.04
SUPT4H1-203ENST00000579289 IL17REQ8NFR9 667 aa15.33■□□□□ 0.04
SUPT4H1-203ENST00000579289 STARD3NLO95772 234 aa15.32■□□□□ 0.04
SUPT4H1-203ENST00000579289 A1BGP04217 495 aa15.32■□□□□ 0.04
SUPT4H1-203ENST00000579289 SOGA3Q5TF21 947 aa15.32■□□□□ 0.04
SUPT4H1-203ENST00000579289 CNBD1Q8NA66 436 aa15.32■□□□□ 0.04
SUPT4H1-203ENST00000579289 CCDC85CA6NKD9 419 aa15.31■□□□□ 0.04
SUPT4H1-203ENST00000579289 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
SUPT4H1-203ENST00000579289 ZNF790Q6PG37 636 aa15.31■□□□□ 0.04
SUPT4H1-203ENST00000579289 HMOX1P09601 288 aa15.3■□□□□ 0.04
SUPT4H1-203ENST00000579289 CYP4F22Q6NT55 531 aa15.3■□□□□ 0.04
SUPT4H1-203ENST00000579289 SLC51AQ86UW1 340 aa15.3■□□□□ 0.04
SUPT4H1-203ENST00000579289 PNMA8AQ86V59 439 aaPredicted RBP15.3■□□□□ 0.04
SUPT4H1-203ENST00000579289 GPC2Q8N158 579 aa15.3■□□□□ 0.04
SUPT4H1-203ENST00000579289 CAPNS2Q96L46 248 aa15.3■□□□□ 0.04
SUPT4H1-203ENST00000579289 SETDB2Q96T68 719 aa15.3■□□□□ 0.04
SUPT4H1-203ENST00000579289 KCNQ3O43525 872 aa15.29■□□□□ 0.04
SUPT4H1-203ENST00000579289 SCNN1DP51172 638 aa15.29■□□□□ 0.04
SUPT4H1-203ENST00000579289 MCOLN1Q9GZU1 580 aa15.29■□□□□ 0.04
SUPT4H1-203ENST00000579289 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
SUPT4H1-203ENST00000579289 AOC2O75106 756 aa15.28■□□□□ 0.04
SUPT4H1-203ENST00000579289 IARSP41252 1262 aaKnown RBP15.28■□□□□ 0.04
SUPT4H1-203ENST00000579289 AMER1Q5JTC6 1135 aaPredicted RBP15.28■□□□□ 0.04
SUPT4H1-203ENST00000579289 MORC1Q86VD1 984 aa15.28■□□□□ 0.04
SUPT4H1-203ENST00000579289 GPR101Q96P66 508 aaPredicted RBP15.28■□□□□ 0.04
SUPT4H1-203ENST00000579289 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
SUPT4H1-203ENST00000579289 TLL2Q9Y6L7 1015 aa15.28■□□□□ 0.04
SUPT4H1-203ENST00000579289 CEMIPQ8WUJ3 1361 aa15.27■□□□□ 0.04
SUPT4H1-203ENST00000579289 PRAMEF22A3QJZ6 481 aa15.27■□□□□ 0.04
SUPT4H1-203ENST00000579289 TRAF5O00463 557 aa15.27■□□□□ 0.04
SUPT4H1-203ENST00000579289 NPR1P16066 1061 aa15.27■□□□□ 0.04
SUPT4H1-203ENST00000579289 SYNE4Q8N205 404 aa15.27■□□□□ 0.04
SUPT4H1-203ENST00000579289 TRPM7Q96QT4 1865 aa15.27■□□□□ 0.03
SUPT4H1-203ENST00000579289 EPS15P42566 896 aa15.26■□□□□ 0.03
SUPT4H1-203ENST00000579289 ST5P78524 1137 aa15.26■□□□□ 0.03
SUPT4H1-203ENST00000579289 TEX13AQ9BXU3 409 aaPredicted RBP15.26■□□□□ 0.03
SUPT4H1-203ENST00000579289 ABT1Q9ULW3 272 aaKnown RBP15.26■□□□□ 0.03
SUPT4H1-203ENST00000579289 USP16Q9Y5T5 823 aa15.26■□□□□ 0.03
SUPT4H1-203ENST00000579289 COL3A1P02461 1466 aaPredicted RBP15.26■□□□□ 0.03
SUPT4H1-203ENST00000579289 PIP4K2AP48426 406 aaPredicted RBP15.25■□□□□ 0.03
SUPT4H1-203ENST00000579289 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
SUPT4H1-203ENST00000579289 DZIP3Q86Y13 1208 aaKnown RBP15.25■□□□□ 0.03
SUPT4H1-203ENST00000579289 RTKN2Q8IZC4 609 aa15.25■□□□□ 0.03
SUPT4H1-203ENST00000579289 PSMD1Q99460 953 aa15.25■□□□□ 0.03
SUPT4H1-203ENST00000579289 CASP8AP2Q9UKL3 1982 aa15.25■□□□□ 0.03
SUPT4H1-203ENST00000579289 NBPF26B4DH59 902 aa15.24■□□□□ 0.03
SUPT4H1-203ENST00000579289 MAP2K2P36507 400 aa15.24■□□□□ 0.03
SUPT4H1-203ENST00000579289 CRY2Q49AN0 593 aa15.24■□□□□ 0.03
SUPT4H1-203ENST00000579289 NBPF10Q6P3W6 841 aaKnown RBP15.24■□□□□ 0.03
SUPT4H1-203ENST00000579289 NBPF15Q8N660 670 aa15.24■□□□□ 0.03
SUPT4H1-203ENST00000579289 PCGF6Q9BYE7 350 aa15.24■□□□□ 0.03
SUPT4H1-203ENST00000579289 SAPCD2Q86UD0 394 aa15.23■□□□□ 0.03
SUPT4H1-203ENST00000579289 TTC5Q8N0Z6 440 aa15.23■□□□□ 0.03
SUPT4H1-203ENST00000579289 ZIC5Q96T25 663 aa15.23■□□□□ 0.03
SUPT4H1-203ENST00000579289 PDE4DIPQ5VU43 2346 aa15.22■□□□□ 0.03
SUPT4H1-203ENST00000579289 RGL2O15211 777 aa15.22■□□□□ 0.03
SUPT4H1-203ENST00000579289 PGAP2Q9UHJ9 254 aa15.22■□□□□ 0.03
SUPT4H1-203ENST00000579289 ZNF330Q9Y3S2 320 aaPredicted RBP15.22■□□□□ 0.03
SUPT4H1-203ENST00000579289 ECE1P42892 770 aa15.21■□□□□ 0.03
SUPT4H1-203ENST00000579289 NBPF5PQ86XG9 351 aaPredicted RBP15.21■□□□□ 0.03
SUPT4H1-203ENST00000579289 FMNL2Q96PY5 1086 aa15.21■□□□□ 0.03
SUPT4H1-203ENST00000579289 POLR3GLQ9BT43 218 aa15.21■□□□□ 0.03
SUPT4H1-203ENST00000579289 ABCC12Q96J65 1359 aa15.21■□□□□ 0.02
SUPT4H1-203ENST00000579289 PER1O15534 1290 aaPredicted RBP15.2■□□□□ 0.02
SUPT4H1-203ENST00000579289 HLFQ16534 295 aa15.2■□□□□ 0.02
SUPT4H1-203ENST00000579289 USP50Q70EL3 339 aaPredicted RBP15.2■□□□□ 0.02
SUPT4H1-203ENST00000579289 HHIPL1Q96JK4 782 aa15.2■□□□□ 0.02
SUPT4H1-203ENST00000579289 GNAT3A8MTJ3 354 aa15.19■□□□□ 0.02
SUPT4H1-203ENST00000579289 HSPA5P11021 654 aaKnown RBP15.19■□□□□ 0.02
SUPT4H1-203ENST00000579289 ALDH1B1P30837 517 aa15.19■□□□□ 0.02
SUPT4H1-203ENST00000579289 HOXA10P31260 410 aaPredicted RBP15.19■□□□□ 0.02
SUPT4H1-203ENST00000579289 RIC1Q4ADV7 1423 aa15.18■□□□□ 0.02
SUPT4H1-203ENST00000579289 HIRAP54198 1017 aaPredicted RBP15.18■□□□□ 0.02
SUPT4H1-203ENST00000579289 BRPF1P55201 1214 aaPredicted RBP15.18■□□□□ 0.02
SUPT4H1-203ENST00000579289 TPTE2Q6XPS3 522 aa15.18■□□□□ 0.02
SUPT4H1-203ENST00000579289 GJA3Q9Y6H8 435 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms