RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 MTFR1LQ9H019 292 aa6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 FAM217BQ9NTX9 383 aaPredicted RBP6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 MYH14Q7Z406 1995 aaKnown RBP6.65□□□□□ -1.34
GAPLINC-202ENST00000579007 FLT4P35916 1363 aa6.65□□□□□ -1.35
GAPLINC-202ENST00000579007 SMG6Q86US8 1419 aaKnown RBP6.65□□□□□ -1.35
GAPLINC-202ENST00000579007 N4BP2Q86UW6 1770 aaPredicted RBP6.64□□□□□ -1.35
GAPLINC-202ENST00000579007 CARNS1A5YM72 827 aa6.64□□□□□ -1.35
GAPLINC-202ENST00000579007 KCNQ4P56696 695 aa6.64□□□□□ -1.35
GAPLINC-202ENST00000579007 FOXK1P85037 733 aa6.64□□□□□ -1.35
GAPLINC-202ENST00000579007 ANKRD13AQ8IZ07 590 aa6.64□□□□□ -1.35
GAPLINC-202ENST00000579007 CCER1Q8TC90 406 aaPredicted RBP6.64□□□□□ -1.35
GAPLINC-202ENST00000579007 COG3Q96JB2 828 aa6.64□□□□□ -1.35
GAPLINC-202ENST00000579007 PPP1R12CQ9BZL4 782 aa6.64□□□□□ -1.35
GAPLINC-202ENST00000579007 GGNBP2Q9H3C7 697 aa6.64□□□□□ -1.35
GAPLINC-202ENST00000579007 INSRP06213 1382 aa6.64□□□□□ -1.35
GAPLINC-202ENST00000579007 FYB1O15117 783 aa6.63□□□□□ -1.35
GAPLINC-202ENST00000579007 SMARCA5O60264 1052 aaPredicted RBP6.63□□□□□ -1.35
GAPLINC-202ENST00000579007 MAP3K9P80192 1104 aa6.63□□□□□ -1.35
GAPLINC-202ENST00000579007 WASHC4Q2M389 1173 aa6.63□□□□□ -1.35
GAPLINC-202ENST00000579007 TUSC1Q2TAM9 212 aa6.63□□□□□ -1.35
GAPLINC-202ENST00000579007 KIF24Q5T7B8 1368 aa6.63□□□□□ -1.35
GAPLINC-202ENST00000579007 NBPF6Q5VWK0 638 aa6.63□□□□□ -1.35
GAPLINC-202ENST00000579007 DNAJC14Q6Y2X3 702 aaPredicted RBP6.63□□□□□ -1.35
GAPLINC-202ENST00000579007 NBPF4Q96M43 638 aa6.63□□□□□ -1.35
GAPLINC-202ENST00000579007 TBC1D2BQ9UPU7 963 aa6.63□□□□□ -1.35
GAPLINC-202ENST00000579007 UBR2Q8IWV8 1755 aa6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 ZNF16P17020 682 aaPredicted RBP6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 AMPHP49418 695 aa6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 AMIGO3Q86WK7 504 aa6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 DDX54Q8TDD1 881 aaKnown RBP6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 ADAMTS19Q8TE59 1207 aa6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 UBXN4Q92575 508 aa6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 SYT17Q9BSW7 474 aa6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 CARD14Q9BXL6 1004 aa6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 CWC22Q9HCG8 908 aaKnown RBP6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 EMILIN1Q9Y6C2 1016 aa6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 ARFGEF1Q9Y6D6 1849 aa6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 SIPA1L3O60292 1781 aaPredicted RBP6.62□□□□□ -1.35
GAPLINC-202ENST00000579007 KDRP35968 1356 aa6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 PALLDQ8WX93 1383 aa6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 PCDH11XQ9BZA7 1347 aa6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 PCDH11YQ9BZA8 1340 aa6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 VAMP1P23763 118 aa6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 PRIM1P49642 420 aaKnown RBP6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 TMF1P82094 1093 aa6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 HSP90AB2PQ58FF8 381 aa6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 SLC27A3Q5K4L6 730 aa6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 DHX37Q8IY37 1157 aaKnown RBP6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 NLGN2Q8NFZ4 835 aa6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 DLEC1Q9Y238 1755 aa6.61□□□□□ -1.35
GAPLINC-202ENST00000579007 AFDNP55196 1824 aaKnown RBP6.6□□□□□ -1.35
GAPLINC-202ENST00000579007 CYP27B1O15528 508 aa6.6□□□□□ -1.35
GAPLINC-202ENST00000579007 ZNF784Q8NCA9 323 aaPredicted RBP6.6□□□□□ -1.35
GAPLINC-202ENST00000579007 ZCRB1Q8TBF4 217 aaKnown RBP6.6□□□□□ -1.35
GAPLINC-202ENST00000579007 SYTL4Q96C24 671 aaPredicted RBP6.6□□□□□ -1.35
GAPLINC-202ENST00000579007 TBC1D2Q9BYX2 928 aa6.6□□□□□ -1.35
GAPLINC-202ENST00000579007 KDM6AO15550 1401 aaPredicted RBP6.59□□□□□ -1.35
GAPLINC-202ENST00000579007 SCN7AQ01118 1682 aa6.59□□□□□ -1.35
GAPLINC-202ENST00000579007 CGNL1Q0VF96 1302 aa6.59□□□□□ -1.35
GAPLINC-202ENST00000579007 PALM3A6NDB9 673 aaPredicted RBP6.59□□□□□ -1.35
GAPLINC-202ENST00000579007 SF3A1Q15459 793 aaKnown RBP6.59□□□□□ -1.35
GAPLINC-202ENST00000579007 BCL2L13Q9BXK5 485 aa6.59□□□□□ -1.35
GAPLINC-202ENST00000579007 CCNL1Q9UK58 526 aaPredicted RBP6.59□□□□□ -1.35
GAPLINC-202ENST00000579007 MRC1P22897 1456 aa6.59□□□□□ -1.36
GAPLINC-202ENST00000579007 ADCY9O60503 1353 aa6.58□□□□□ -1.36
GAPLINC-202ENST00000579007 LMOD1P29536 600 aaPredicted RBP6.58□□□□□ -1.36
GAPLINC-202ENST00000579007 GOLGA2Q08379 1002 aa6.58□□□□□ -1.36
GAPLINC-202ENST00000579007 MSL1Q68DK7 614 aa6.58□□□□□ -1.36
GAPLINC-202ENST00000579007 COL23A1Q86Y22 540 aaPredicted RBP6.58□□□□□ -1.36
GAPLINC-202ENST00000579007 PHOX2BQ99453 314 aa6.58□□□□□ -1.36
GAPLINC-202ENST00000579007 TIAM2Q8IVF5 1701 aa6.58□□□□□ -1.36
GAPLINC-202ENST00000579007 NRXN2Q9P2S2 1712 aa6.58□□□□□ -1.36
GAPLINC-202ENST00000579007 CACNA1SQ13698 1873 aa6.58□□□□□ -1.36
GAPLINC-202ENST00000579007 BCORQ6W2J9 1755 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 COL11A2P13942 1736 aaPredicted RBP6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 MAP3K13O43283 966 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 YBX3P16989 372 aaKnown RBP eCLIP6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 TATP17735 454 aaPredicted RBP6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 SMIM5Q71RC9 77 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 TMC2Q8TDI7 906 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 SLC16A10Q8TF71 515 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 RAPGEF4Q8WZA2 1011 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 TFCP2L1Q9NZI6 479 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 LIMD1Q9UGP4 676 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 NDUFB9Q9Y6M9 179 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 PXDNLA1KZ92 1463 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 SBF1O95248 1867 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 PLEKHG2Q9H7P9 1386 aa6.57□□□□□ -1.36
GAPLINC-202ENST00000579007 KCPQ6ZWJ8 1503 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 WASHC2AQ641Q2 1341 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 IGSF1Q8N6C5 1336 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 ZC3H4Q9UPT8 1303 aaKnown RBP6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 ANKRD31Q8N7Z5 1873 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 COL3A1P02461 1466 aaPredicted RBP6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 PLPP6Q8IY26 295 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 LINC00116Q8NCU8 138 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 DDX12PQ92771 950 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 KIF12Q96FN5 646 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 EYA1Q99502 592 aa6.56□□□□□ -1.36
GAPLINC-202ENST00000579007 C10orf71Q711Q0 1435 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms