RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 ATF7IPQ6VMQ6 1270 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 RHOXF2Q9BQY4 288 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 PPP1R12AO14974 1030 aaPredicted RBP5.09□□□□□ -1.59
CDH8-205ENST00000577730 ATP2B1P20020 1258 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 TCP11L2Q8N4U5 519 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 GPR161Q8N6U8 529 aaKnown RBP5.09□□□□□ -1.59
CDH8-205ENST00000577730 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.09□□□□□ -1.59
CDH8-205ENST00000577730 GBP5Q96PP8 586 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 ALS2CR12Q96Q35 445 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 PPP1R12CQ9BZL4 782 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 RNF216Q9NWF9 866 aaPredicted RBP5.09□□□□□ -1.59
CDH8-205ENST00000577730 BAIAP2L1Q9UHR4 511 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 HIP1O00291 1037 aa5.09□□□□□ -1.6
CDH8-205ENST00000577730 ZSCAN22P10073 491 aaPredicted RBP5.09□□□□□ -1.6
CDH8-205ENST00000577730 SYT1P21579 422 aa5.09□□□□□ -1.6
CDH8-205ENST00000577730 FBLN2P98095 1184 aa5.09□□□□□ -1.6
CDH8-205ENST00000577730 PNMA8AQ86V59 439 aaPredicted RBP5.09□□□□□ -1.6
CDH8-205ENST00000577730 FBXO18Q8NFZ0 1043 aa5.09□□□□□ -1.6
CDH8-205ENST00000577730 FAM212AQ96EL1 285 aa5.09□□□□□ -1.6
CDH8-205ENST00000577730 CARD6Q9BX69 1037 aa5.09□□□□□ -1.6
CDH8-205ENST00000577730 NOB1Q9ULX3 412 aaKnown RBP5.09□□□□□ -1.6
CDH8-205ENST00000577730 USO1O60763 962 aaKnown RBP5.09□□□□□ -1.6
CDH8-205ENST00000577730 RANBP1P43487 201 aa5.09□□□□□ -1.6
CDH8-205ENST00000577730 TYRO3Q06418 890 aa5.09□□□□□ -1.6
CDH8-205ENST00000577730 PDCD2Q16342 344 aaPredicted RBP5.09□□□□□ -1.6
CDH8-205ENST00000577730 TADA2BQ86TJ2 420 aa5.09□□□□□ -1.6
CDH8-205ENST00000577730 CEP104O60308 925 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 PPFIA4O75335 1185 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 DNAJC25Q9H1X3 360 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 C1orf115Q9H7X2 142 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 FYB1O15117 783 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 CACNA2D4Q7Z3S7 1137 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 ARMC2Q8NEN0 867 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 GNL3LQ9NVN8 582 aaKnown RBP5.08□□□□□ -1.6
CDH8-205ENST00000577730 DONSONQ9NYP3 566 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 PUF60Q9UHX1 559 aaKnown RBP5.08□□□□□ -1.6
CDH8-205ENST00000577730 TPX2Q9ULW0 747 aaKnown RBP5.08□□□□□ -1.6
CDH8-205ENST00000577730 WDHD1O75717 1129 aaPredicted RBP5.08□□□□□ -1.6
CDH8-205ENST00000577730 SLC20A2Q08357 652 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 HLTFQ14527 1009 aaKnown RBP eCLIP5.08□□□□□ -1.6
CDH8-205ENST00000577730 FAM71BQ8TC56 605 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 CNKSR2Q8WXI2 1034 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 TTC14Q96N46 770 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 NAP1L3Q99457 506 aaPredicted RBP5.08□□□□□ -1.6
CDH8-205ENST00000577730 VCX3BQ9H321 246 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 VCX3AQ9NNX9 186 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 CNPY2Q9Y2B0 182 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 MARCH6O60337 910 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 ERCC6LQ2NKX8 1250 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 TBC1D9Q6ZT07 1266 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 STIM2Q9P246 746 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 WDR97A6NE52 1622 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 IBTKQ9P2D0 1353 aaPredicted RBP5.08□□□□□ -1.6
CDH8-205ENST00000577730 CTAGE9A4FU28 777 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 CHMP4BP1P59074 171 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 STK3Q13188 491 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 GBP7Q8N8V2 638 aaPredicted RBP5.08□□□□□ -1.6
CDH8-205ENST00000577730 LIMCH1Q9UPQ0 1083 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 PPFIA1Q13136 1202 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 HDAC1Q13547 482 aaPredicted RBP5.08□□□□□ -1.6
CDH8-205ENST00000577730 TMX3Q96JJ7 454 aa5.08□□□□□ -1.6
CDH8-205ENST00000577730 JAKMIP1Q96N16 626 aaKnown RBP5.08□□□□□ -1.6
CDH8-205ENST00000577730 ZNF75DP51815 510 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 DYNC1I2Q13409 638 aaKnown RBP5.07□□□□□ -1.6
CDH8-205ENST00000577730 NBPF20Q3BBV1 942 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 CFAP58Q5T655 872 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 CPLX3Q8WVH0 158 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 MED4Q9NPJ6 270 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 GNGT1P63211 74 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 ZNF513Q8N8E2 541 aaPredicted RBP5.07□□□□□ -1.6
CDH8-205ENST00000577730 TRIM7Q9C029 511 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 ANKRD36BQ8N2N9 1353 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 TTC36A6NLP5 189 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 EFCAB8A8MWE9 144 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 CHUKO15111 745 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 CYP2C19P33261 490 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 CCDC158Q5M9N0 1113 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 PAF1Q8N7H5 531 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 MPHOSPH8Q99549 860 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 LMBRD1Q9NUN5 540 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 RABGAP1Q9Y3P9 1069 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 SEC24BO95487 1268 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 STIM1Q13586 685 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 CCDC174Q6PII3 467 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 NFXL1Q6ZNB6 911 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 CFAP57Q96MR6 1250 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 FSD1Q9BTV5 496 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 SRCIN1Q9C0H9 1055 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 EIF3CLB5ME19 914 aaKnown RBP5.07□□□□□ -1.6
CDH8-205ENST00000577730 EPS15P42566 896 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 MAP3K9P80192 1104 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 PSMD2Q13200 908 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 SETDB1Q15047 1291 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 DTNBP1Q96EV8 351 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 NUP88Q99567 741 aaPredicted RBP5.07□□□□□ -1.6
CDH8-205ENST00000577730 EIF3CQ99613 913 aaKnown RBP5.07□□□□□ -1.6
CDH8-205ENST00000577730 STMN4Q9H169 189 aaPredicted RBP5.07□□□□□ -1.6
CDH8-205ENST00000577730 JADE2Q9NQC1 790 aa5.07□□□□□ -1.6
CDH8-205ENST00000577730 MORC2Q9Y6X9 1032 aaPredicted RBP5.07□□□□□ -1.6
CDH8-205ENST00000577730 ATAD2Q6PL18 1390 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms