RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 BCS1LQ9Y276 419 aa34.38■■■■□ 3.09
PPP4R1-204ENST00000577393 GNAI1P63096 354 aa34.37■■■■□ 3.09
PPP4R1-204ENST00000577393 NECTIN2Q92692 538 aa34.37■■■■□ 3.09
PPP4R1-204ENST00000577393 PRR5LQ6MZQ0 368 aa34.36■■■■□ 3.09
PPP4R1-204ENST00000577393 PIM2Q9P1W9 311 aa34.36■■■■□ 3.09
PPP4R1-204ENST00000577393 ERVV-1B6SEH8 477 aa34.35■■■■□ 3.09
PPP4R1-204ENST00000577393 KIF6Q6ZMV9 814 aa34.35■■■■□ 3.09
PPP4R1-204ENST00000577393 MAP3K15Q6ZN16 1313 aa34.34■■■■□ 3.09
PPP4R1-204ENST00000577393 CCDC27Q2M243 656 aa34.34■■■■□ 3.09
PPP4R1-204ENST00000577393 PROSER3Q2NL68 480 aa34.34■■■■□ 3.09
PPP4R1-204ENST00000577393 LRP10Q7Z4F1 713 aa34.34■■■■□ 3.09
PPP4R1-204ENST00000577393 CCDC24Q8N4L8 307 aa34.34■■■■□ 3.09
PPP4R1-204ENST00000577393 BRCA1P38398 1863 aaKnown RBP34.33■■■■□ 3.09
PPP4R1-204ENST00000577393 ANXA1P04083 346 aa34.33■■■■□ 3.09
PPP4R1-204ENST00000577393 NIP7Q9Y221 180 aaKnown RBP eCLIP34.33■■■■□ 3.09
PPP4R1-204ENST00000577393 HOXB7P09629 217 aa34.32■■■■□ 3.08
PPP4R1-204ENST00000577393 FAM9BQ8IZU0 186 aa34.32■■■■□ 3.08
PPP4R1-204ENST00000577393 CNBD1Q8NA66 436 aa34.32■■■■□ 3.08
PPP4R1-204ENST00000577393 NPHP1O15259 732 aa34.31■■■■□ 3.08
PPP4R1-204ENST00000577393 DUSP27Q5VZP5 1158 aa34.31■■■■□ 3.08
PPP4R1-204ENST00000577393 WWC1Q8IX03 1113 aa34.31■■■■□ 3.08
PPP4R1-204ENST00000577393 NCBP3Q53F19 620 aaKnown RBP34.3■■■■□ 3.08
PPP4R1-204ENST00000577393 NBPF5PQ86XG9 351 aaPredicted RBP34.3■■■■□ 3.08
PPP4R1-204ENST00000577393 BRIP1Q9BX63 1249 aa34.3■■■■□ 3.08
PPP4R1-204ENST00000577393 ZBTB3Q9H5J0 574 aa34.3■■■■□ 3.08
PPP4R1-204ENST00000577393 DALRD3Q5D0E6 543 aaKnown RBP34.29■■■■□ 3.08
PPP4R1-204ENST00000577393 HDGFL1Q5TGJ6 251 aa34.29■■■■□ 3.08
PPP4R1-204ENST00000577393 C2CD5Q86YS7 1000 aa34.29■■■■□ 3.08
PPP4R1-204ENST00000577393 DDX21Q9NR30 783 aaKnown RBP eCLIP34.28■■■■□ 3.08
PPP4R1-204ENST00000577393 H0YIN7 160 aa34.27■■■■□ 3.08
PPP4R1-204ENST00000577393 ST5P78524 1137 aa34.27■■■■□ 3.08
PPP4R1-204ENST00000577393 PDE6BP35913 854 aa34.26■■■■□ 3.08
PPP4R1-204ENST00000577393 CHPF2Q9P2E5 772 aa34.26■■■■□ 3.08
PPP4R1-204ENST00000577393 ANKRD31Q8N7Z5 1873 aa34.26■■■■□ 3.07
PPP4R1-204ENST00000577393 NUP98P52948 1817 aa34.25■■■■□ 3.07
PPP4R1-204ENST00000577393 FAM177BA6PVY3 158 aa34.25■■■■□ 3.07
PPP4R1-204ENST00000577393 COPS6Q7L5N1 327 aa34.25■■■■□ 3.07
PPP4R1-204ENST00000577393 SALL2Q9Y467 1007 aaPredicted RBP34.25■■■■□ 3.07
PPP4R1-204ENST00000577393 TPTE2Q6XPS3 522 aa34.24■■■■□ 3.07
PPP4R1-204ENST00000577393 XAGE3Q8WTP9 111 aa34.24■■■■□ 3.07
PPP4R1-204ENST00000577393 ATP10DQ9P241 1426 aa34.23■■■■□ 3.07
PPP4R1-204ENST00000577393 ELL2O00472 640 aaPredicted RBP34.23■■■■□ 3.07
PPP4R1-204ENST00000577393 AIMP1Q12904 312 aaKnown RBP34.23■■■■□ 3.07
PPP4R1-204ENST00000577393 GIGYF2Q6Y7W6 1299 aaKnown RBP34.23■■■■□ 3.07
PPP4R1-204ENST00000577393 PDZRN3Q9UPQ7 1066 aa34.23■■■■□ 3.07
PPP4R1-204ENST00000577393 ARHGAP27Q6ZUM4 889 aa34.22■■■■□ 3.07
PPP4R1-204ENST00000577393 C8orf58Q8NAV2 365 aa34.22■■■■□ 3.07
PPP4R1-204ENST00000577393 ZNF784Q8NCA9 323 aaPredicted RBP34.22■■■■□ 3.07
PPP4R1-204ENST00000577393 GPTP24298 496 aa34.21■■■■□ 3.07
PPP4R1-204ENST00000577393 TSR2Q969E8 191 aaKnown RBP34.21■■■■□ 3.07
PPP4R1-204ENST00000577393 DBF4Q9UBU7 674 aaPredicted RBP34.21■■■■□ 3.07
PPP4R1-204ENST00000577393 ARFGEF1Q9Y6D6 1849 aa34.2■■■■□ 3.07
PPP4R1-204ENST00000577393 TTLL6Q8N841 843 aa34.2■■■■□ 3.07
PPP4R1-204ENST00000577393 IL16Q14005 1332 aa34.2■■■■□ 3.07
PPP4R1-204ENST00000577393 DLEC1Q9Y238 1755 aa34.2■■■■□ 3.07
PPP4R1-204ENST00000577393 ZNF34Q8IZ26 560 aa34.19■■■■□ 3.06
PPP4R1-204ENST00000577393 ZNF622Q969S3 477 aaKnown RBP eCLIP34.19■■■■□ 3.063e-8■□□□□ 10.5
PPP4R1-204ENST00000577393 UBN2Q6ZU65 1347 aa34.18■■■■□ 3.06
PPP4R1-204ENST00000577393 NYXQ9GZU5 481 aa34.17■■■■□ 3.06
PPP4R1-204ENST00000577393 GTF2E1P29083 439 aaPredicted RBP34.16■■■■□ 3.06
PPP4R1-204ENST00000577393 SUSD4Q5VX71 490 aa34.15■■■■□ 3.06
PPP4R1-204ENST00000577393 WDR63Q8IWG1 891 aa34.15■■■■□ 3.06
PPP4R1-204ENST00000577393 TSPYL6Q8N831 410 aa34.15■■■■□ 3.06
PPP4R1-204ENST00000577393 HYPKQ9NX55 129 aa34.15■■■■□ 3.06
PPP4R1-204ENST00000577393 COL11A2P13942 1736 aaPredicted RBP34.15■■■■□ 3.06
PPP4R1-204ENST00000577393 SRGNP10124 158 aa34.14■■■■□ 3.06
PPP4R1-204ENST00000577393 NUTM1Q86Y26 1132 aa34.13■■■■□ 3.05
PPP4R1-204ENST00000577393 PARP10Q53GL7 1025 aa34.12■■■■□ 3.05
PPP4R1-204ENST00000577393 IBTKQ9P2D0 1353 aaPredicted RBP34.11■■■■□ 3.05
PPP4R1-204ENST00000577393 KLRG2A4D1S0 409 aaPredicted RBP34.11■■■■□ 3.05
PPP4R1-204ENST00000577393 ERFEQ4G0M1 354 aa34.11■■■■□ 3.05
PPP4R1-204ENST00000577393 HSP90AB3PQ58FF7 597 aa34.11■■■■□ 3.05
PPP4R1-204ENST00000577393 STYK1Q6J9G0 422 aa34.11■■■■□ 3.05
PPP4R1-204ENST00000577393 MASTLQ96GX5 879 aa34.11■■■■□ 3.05
PPP4R1-204ENST00000577393 ANKRD13DQ6ZTN6 518 aa34.1■■■■□ 3.05
PPP4R1-204ENST00000577393 PLBD2Q8NHP8 589 aa34.1■■■■□ 3.05
PPP4R1-204ENST00000577393 ABCC12Q96J65 1359 aa34.1■■■■□ 3.05
PPP4R1-204ENST00000577393 NTSR2O95665 410 aa34.09■■■■□ 3.05
PPP4R1-204ENST00000577393 TCIRG1Q13488 830 aa34.09■■■■□ 3.05
PPP4R1-204ENST00000577393 PPP1R42Q7Z4L9 355 aa34.09■■■■□ 3.05
PPP4R1-204ENST00000577393 CNKSR1Q969H4 720 aa34.09■■■■□ 3.05
PPP4R1-204ENST00000577393 CHMP4AQ9BY43 222 aa34.09■■■■□ 3.05
PPP4R1-204ENST00000577393 ADCY9O60503 1353 aa34.09■■■■□ 3.05
PPP4R1-204ENST00000577393 CCDC30Q5VVM6 783 aa34.08■■■■□ 3.05
PPP4R1-204ENST00000577393 PHAXQ9H814 394 aaKnown RBP34.07■■■■□ 3.04
PPP4R1-204ENST00000577393 FANCIQ9NVI1 1328 aa34.06■■■■□ 3.04
PPP4R1-204ENST00000577393 CCER2I3L3R5 266 aa34.06■■■■□ 3.04
PPP4R1-204ENST00000577393 NPR1P16066 1061 aa34.06■■■■□ 3.04
PPP4R1-204ENST00000577393 UTP14AQ9BVJ6 771 aaKnown RBP34.06■■■■□ 3.04
PPP4R1-204ENST00000577393 TWISTNBQ3B726 338 aaPredicted RBP34.05■■■■□ 3.04
PPP4R1-204ENST00000577393 ZNF219Q9P2Y4 722 aaPredicted RBP34.05■■■■□ 3.04
PPP4R1-204ENST00000577393 PRPF40BQ6NWY9 871 aaKnown RBP34.04■■■■□ 3.04
PPP4R1-204ENST00000577393 NLRP10Q86W26 655 aa34.04■■■■□ 3.04
PPP4R1-204ENST00000577393 ANKRD36CQ5JPF3 1778 aa34.03■■■■□ 3.04
PPP4R1-204ENST00000577393 C21orf2O43822 256 aa34.03■■■■□ 3.04
PPP4R1-204ENST00000577393 C9orf131Q5VYM1 1079 aa34.03■■■■□ 3.04
PPP4R1-204ENST00000577393 SPINK5Q9NQ38 1064 aaPredicted RBP34.03■■■■□ 3.04
PPP4R1-204ENST00000577393 TNRC6CQ9HCJ0 1690 aaKnown RBP34.02■■■■□ 3.04
PPP4R1-204ENST00000577393 SLX4Q8IY92 1834 aa34.02■■■■□ 3.04
PPP4R1-204ENST00000577393 RASSF7Q02833 373 aa34.01■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms