RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 C21orf2O43822 256 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 F11P03951 625 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 SLURP2P0DP57 97 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 PLA2G4AP47712 749 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 FKBP4Q02790 459 aaKnown RBP eCLIP4.47□□□□□ -1.69
COPS3-213ENST00000577210 KCNMA1Q12791 1236 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 FKBP5Q13451 457 aaPredicted RBP4.47□□□□□ -1.69
COPS3-213ENST00000577210 C11orf91Q3C1V1 193 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 C4orf17Q53FE4 359 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 EFHC2Q5JST6 749 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 IER5Q5VY09 327 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 FIGNL1Q6PIW4 674 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 TTC16Q8NEE8 873 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 HELQQ8TDG4 1101 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 AIDAQ96BJ3 306 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 ZNF837Q96EG3 531 aaPredicted RBP4.47□□□□□ -1.69
COPS3-213ENST00000577210 ADAMTS8Q9UP79 889 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 GJA3Q9Y6H8 435 aa4.47□□□□□ -1.69
COPS3-213ENST00000577210 GPR25O00155 361 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 ARHGEF15O94989 841 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 ADAMTS2O95450 1211 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 EPB42P16452 691 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 PCSK2P16519 638 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 ERCC3P19447 782 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 USP5P45974 858 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 POU4F2Q12837 409 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 ARSJQ5FYB0 599 aaPredicted RBP4.46□□□□□ -1.7
COPS3-213ENST00000577210 TMCO4Q5TGY1 634 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 FOXR1Q6PIV2 292 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 BICDL1Q6ZP65 573 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 NLRP8Q86W28 1048 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 GLYCTKQ8IVS8 523 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 ALDH16A1Q8IZ83 802 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 RHPN1Q8TCX5 695 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 GTF3C2Q8WUA4 911 aaPredicted RBP4.46□□□□□ -1.7
COPS3-213ENST00000577210 PHACTR1Q9C0D0 580 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 BCL11AQ9H165 835 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 CRISPLD1Q9H336 500 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 C11orf16Q9NQ32 467 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 STIM2Q9P246 746 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 CCDC9Q9Y3X0 531 aaKnown RBP4.46□□□□□ -1.7
COPS3-213ENST00000577210 IVNS1ABPQ9Y6Y0 642 aa4.46□□□□□ -1.7
COPS3-213ENST00000577210 ICMTO60725 284 aa4.45□□□□□ -1.7
COPS3-213ENST00000577210 STAU1O95793 577 aaKnown RBP4.45□□□□□ -1.7
COPS3-213ENST00000577210 ABL1P00519 1130 aa4.45□□□□□ -1.7
COPS3-213ENST00000577210 PHLDB3Q6NSJ2 640 aa4.45□□□□□ -1.7
COPS3-213ENST00000577210 LYPD4Q6UWN0 246 aa4.45□□□□□ -1.7
COPS3-213ENST00000577210 SND1Q7KZF4 910 aaKnown RBP eCLIP4.45□□□□□ -1.7
COPS3-213ENST00000577210 ZNF295-AS1Q8N0V1 137 aa4.45□□□□□ -1.7
COPS3-213ENST00000577210 CITED4Q96RK1 184 aa4.45□□□□□ -1.7
COPS3-213ENST00000577210 MKNK1Q9BUB5 465 aa4.45□□□□□ -1.7
COPS3-213ENST00000577210 EFCC1Q9HA90 598 aa4.45□□□□□ -1.7
COPS3-213ENST00000577210 SOWAHDA6NJG2 315 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 TGFBR3LH3BV60 316 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 NPR3P17342 541 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 FGD1P98174 961 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 RASSF7Q02833 373 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 DBN1Q16643 649 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 NOM1Q5C9Z4 860 aaKnown RBP4.44□□□□□ -1.7
COPS3-213ENST00000577210 TBCELQ5QJ74 424 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 RIPOR1Q6ZS17 1223 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 ZDHHC1Q8WTX9 485 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 NGLY1Q96IV0 654 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 BIN2Q9UBW5 565 aaPredicted RBP4.44□□□□□ -1.7
COPS3-213ENST00000577210 PHF24Q9UPV7 400 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 HCN4Q9Y3Q4 1203 aa4.44□□□□□ -1.7
COPS3-213ENST00000577210 CARNS1A5YM72 827 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 NDUFB5O43674 189 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 GDF11O95390 407 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 NEFLP07196 543 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 MSX1P28360 303 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 ITGAEP38570 1179 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 PHKA2P46019 1235 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 SRSF11Q05519 484 aaKnown RBP4.43□□□□□ -1.7
COPS3-213ENST00000577210 EHHADHQ08426 723 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 PDE3BQ13370 1112 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 AAMPQ13685 434 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 LAMC2Q13753 1193 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 CCDC27Q2M243 656 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 COX20Q5RI15 118 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 SAMD5Q5TGI4 173 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 ZSCAN29Q8IWY8 852 aaPredicted RBP4.43□□□□□ -1.7
COPS3-213ENST00000577210 TRIM22Q8IYM9 498 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 TMEM151AQ8N4L1 468 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 GTPBP3Q969Y2 492 aaKnown RBP4.43□□□□□ -1.7
COPS3-213ENST00000577210 IFT43Q96FT9 208 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 TRERF1Q96PN7 1200 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 GAS2L1Q99501 681 aaPredicted RBP4.43□□□□□ -1.7
COPS3-213ENST00000577210 GZF1Q9H116 711 aaPredicted RBP4.43□□□□□ -1.7
COPS3-213ENST00000577210 SLAIN2Q9P270 581 aa4.43□□□□□ -1.7
COPS3-213ENST00000577210 FNDC3AQ9Y2H6 1198 aaKnown RBP4.43□□□□□ -1.7
COPS3-213ENST00000577210 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
COPS3-213ENST00000577210 H3BRB1 525 aa4.42□□□□□ -1.7
COPS3-213ENST00000577210 THBS1P07996 1170 aa4.42□□□□□ -1.7
COPS3-213ENST00000577210 CELA2BP08218 269 aaPredicted RBP4.42□□□□□ -1.7
COPS3-213ENST00000577210 IRS1P35568 1242 aa4.42□□□□□ -1.7
COPS3-213ENST00000577210 TXLNAP40222 546 aa4.42□□□□□ -1.7
COPS3-213ENST00000577210 TRIM26Q12899 539 aaPredicted RBP4.42□□□□□ -1.7
COPS3-213ENST00000577210 NEUROD1Q13562 356 aa4.42□□□□□ -1.7
COPS3-213ENST00000577210 DGKZQ13574 1117 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms