RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 AMOTL2Q9Y2J4 779 aa20.94■□□□□ 0.94
ATPAF1-214ENST00000576409 PLCH2O75038 1416 aa20.94■□□□□ 0.94
ATPAF1-214ENST00000576409 NPC1L1Q9UHC9 1359 aa20.94■□□□□ 0.94
ATPAF1-214ENST00000576409 TATP17735 454 aaPredicted RBP20.93■□□□□ 0.94
ATPAF1-214ENST00000576409 TYRO3Q06418 890 aa20.93■□□□□ 0.94
ATPAF1-214ENST00000576409 CCDC70Q6NSX1 233 aa20.93■□□□□ 0.94
ATPAF1-214ENST00000576409 A0A087WZG4 1122 aa20.93■□□□□ 0.94
ATPAF1-214ENST00000576409 ANAPC15P60006 121 aa20.93■□□□□ 0.94
ATPAF1-214ENST00000576409 NEK1Q96PY6 1258 aa20.93■□□□□ 0.94
ATPAF1-214ENST00000576409 DENND4BO75064 1496 aaPredicted RBP20.92■□□□□ 0.94
ATPAF1-214ENST00000576409 CEP135Q66GS9 1140 aa20.92■□□□□ 0.94
ATPAF1-214ENST00000576409 GPT2Q8TD30 523 aa20.92■□□□□ 0.94
ATPAF1-214ENST00000576409 TMCO3Q6UWJ1 677 aa20.92■□□□□ 0.94
ATPAF1-214ENST00000576409 PPFIBP1Q86W92 1011 aa20.92■□□□□ 0.94
ATPAF1-214ENST00000576409 ERBB4Q15303 1308 aa20.92■□□□□ 0.94
ATPAF1-214ENST00000576409 SLC39A6Q13433 755 aa20.92■□□□□ 0.94
ATPAF1-214ENST00000576409 KIAA0556O60303 1618 aa20.92■□□□□ 0.94
ATPAF1-214ENST00000576409 PTPRTO14522 1441 aa20.91■□□□□ 0.94
ATPAF1-214ENST00000576409 GTF2F1P35269 517 aaKnown RBP eCLIP20.91■□□□□ 0.94
ATPAF1-214ENST00000576409 AXDND1Q5T1B0 1012 aaPredicted RBP20.91■□□□□ 0.94
ATPAF1-214ENST00000576409 IFIT1P09914 478 aaKnown RBP20.91■□□□□ 0.94
ATPAF1-214ENST00000576409 FAM193AP78312 1265 aa20.91■□□□□ 0.94
ATPAF1-214ENST00000576409 HS1BP3Q53T59 392 aa20.91■□□□□ 0.94
ATPAF1-214ENST00000576409 TTC21BQ7Z4L5 1316 aa20.91■□□□□ 0.94
ATPAF1-214ENST00000576409 U3KPZ7 1027 aaPredicted RBP20.9■□□□□ 0.94
ATPAF1-214ENST00000576409 DUOX2Q9NRD8 1548 aa20.9■□□□□ 0.94
ATPAF1-214ENST00000576409 FILIP1LQ4L180 1135 aa20.9■□□□□ 0.94
ATPAF1-214ENST00000576409 LARP1Q6PKG0 1096 aaKnown RBP20.9■□□□□ 0.94
ATPAF1-214ENST00000576409 KDM5CP41229 1560 aa20.9■□□□□ 0.94
ATPAF1-214ENST00000576409 SART3Q15020 963 aaKnown RBP20.89■□□□□ 0.94
ATPAF1-214ENST00000576409 NMIQ13287 307 aaPredicted RBP20.89■□□□□ 0.93
ATPAF1-214ENST00000576409 SLC3A2P08195 630 aaKnown RBP20.89■□□□□ 0.93
ATPAF1-214ENST00000576409 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
ATPAF1-214ENST00000576409 NDUFB9Q9Y6M9 179 aa20.89■□□□□ 0.93
ATPAF1-214ENST00000576409 KLHDC4Q8TBB5 520 aa20.88■□□□□ 0.93
ATPAF1-214ENST00000576409 CCDC102AQ96A19 550 aa20.88■□□□□ 0.93
ATPAF1-214ENST00000576409 ADGRL2O95490 1459 aa20.88■□□□□ 0.93
ATPAF1-214ENST00000576409 IL13P35225 146 aa20.88■□□□□ 0.93
ATPAF1-214ENST00000576409 EYA1Q99502 592 aa20.88■□□□□ 0.93
ATPAF1-214ENST00000576409 ITSN2Q9NZM3 1697 aa20.88■□□□□ 0.93
ATPAF1-214ENST00000576409 DHX37Q8IY37 1157 aaKnown RBP20.88■□□□□ 0.93
ATPAF1-214ENST00000576409 RUFY1Q96T51 708 aa20.88■□□□□ 0.93
ATPAF1-214ENST00000576409 ZBTB3Q9H5J0 574 aa20.88■□□□□ 0.93
ATPAF1-214ENST00000576409 GOLGA8BA8MQT2 603 aa20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 U2AF2P26368 475 aaKnown RBP eCLIP20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 PROSER2Q86WR7 435 aaPredicted RBP20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 ERCC4Q92889 916 aaPredicted RBP20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 INSRP06213 1382 aa20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 TOP1P11387 765 aaKnown RBP20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 LMOD1P29536 600 aaPredicted RBP20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 IMMTQ16891 758 aaKnown RBP20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 TRIM22Q8IYM9 498 aa20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 INTS4Q96HW7 963 aaKnown RBP20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 SNW1Q13573 536 aaKnown RBP20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 AOPEPQ8N6M6 819 aa20.87■□□□□ 0.93
ATPAF1-214ENST00000576409 ORC3Q9UBD5 711 aaPredicted RBP20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 USP16Q9Y5T5 823 aa20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 CCDC69A6NI79 296 aa20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 ATF3P18847 181 aa20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 LEKR1Q6ZMV7 388 aa20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 NSFL1CQ9UNZ2 370 aaKnown RBP20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 RIOK3O14730 519 aaKnown RBP20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 MARCKSP29966 332 aaPredicted RBP20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 Q6ZUG5 572 aa20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 SIRT2Q8IXJ6 389 aa20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 BCORL1Q5H9F3 1711 aa20.86■□□□□ 0.93
ATPAF1-214ENST00000576409 SMTNL1A8MU46 457 aa20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 CCP110O43303 1012 aa20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 XBP1P17861 261 aa20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 TRIM34Q9BYJ4 488 aa20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 STX1AQ16623 288 aa20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 SAMD1Q6SPF0 538 aaPredicted RBP20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 NBPF7P0C2Y1 421 aaPredicted RBP20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 ARHGAP29Q52LW3 1261 aa20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 CREB3L3Q68CJ9 461 aa20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 MICU3Q86XE3 530 aa20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 LRRC59Q96AG4 307 aaKnown RBP20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 CCDC94Q9BW85 323 aaPredicted RBP20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 DNAI1Q9UI46 699 aa20.85■□□□□ 0.93
ATPAF1-214ENST00000576409 CTNNA3Q9UI47 895 aa20.84■□□□□ 0.93
ATPAF1-214ENST00000576409 PIK3R4Q99570 1358 aa20.84■□□□□ 0.93
ATPAF1-214ENST00000576409 KAT6BQ8WYB5 2073 aa20.84■□□□□ 0.93
ATPAF1-214ENST00000576409 RNF216Q9NWF9 866 aaPredicted RBP20.84■□□□□ 0.93
ATPAF1-214ENST00000576409 SNX14Q9Y5W7 946 aa20.84■□□□□ 0.93
ATPAF1-214ENST00000576409 PPIP5K1Q6PFW1 1433 aa20.84■□□□□ 0.93
ATPAF1-214ENST00000576409 TOM1L2Q6ZVM7 507 aa20.83■□□□□ 0.93
ATPAF1-214ENST00000576409 CCDC47Q96A33 483 aaKnown RBP20.83■□□□□ 0.93
ATPAF1-214ENST00000576409 FAM227BQ96M60 508 aa20.83■□□□□ 0.93
ATPAF1-214ENST00000576409 ABCF2Q9UG63 623 aa20.83■□□□□ 0.93
ATPAF1-214ENST00000576409 SOS1Q07889 1333 aaPredicted RBP20.83■□□□□ 0.93
ATPAF1-214ENST00000576409 TDO2P48775 406 aa20.83■□□□□ 0.93
ATPAF1-214ENST00000576409 PPP1R9BQ96SB3 815 aa20.83■□□□□ 0.93
ATPAF1-214ENST00000576409 GCC2Q8IWJ2 1684 aa20.83■□□□□ 0.92
ATPAF1-214ENST00000576409 WDR7Q9Y4E6 1490 aa20.83■□□□□ 0.92
ATPAF1-214ENST00000576409 BRD1O95696 1058 aa20.83■□□□□ 0.92
ATPAF1-214ENST00000576409 HSP90AB3PQ58FF7 597 aa20.83■□□□□ 0.92
ATPAF1-214ENST00000576409 THEMISQ8N1K5 641 aaPredicted RBP20.83■□□□□ 0.92
ATPAF1-214ENST00000576409 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.83■□□□□ 0.92
ATPAF1-214ENST00000576409 ACBD3Q9H3P7 528 aa20.83■□□□□ 0.92
ATPAF1-214ENST00000576409 H0YHG0 523 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms