RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	DUSP27	Q5VZP5	1158 aa		32.83	■■■□□ 2.85
SRRM2-223	ENST00000575701		A0A0G2JLW4	131 aa		32.82	■■■□□ 2.84
SRRM2-223	ENST00000575701	DPEP1	P16444	411 aa		32.82	■■■□□ 2.84
SRRM2-223	ENST00000575701	LRP10	Q7Z4F1	713 aa		32.82	■■■□□ 2.84
SRRM2-223	ENST00000575701	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.82	■■■□□ 2.84
SRRM2-223	ENST00000575701	BRCA1	P38398	1863 aa	Known RBP	32.82	■■■□□ 2.84
SRRM2-223	ENST00000575701	TTLL7	Q6ZT98	887 aa		32.8	■■■□□ 2.84
SRRM2-223	ENST00000575701	CHMP4A	Q9BY43	222 aa		32.8	■■■□□ 2.84
SRRM2-223	ENST00000575701	CHD4	Q14839	1912 aa		32.8	■■■□□ 2.84
SRRM2-223	ENST00000575701	NUP98	P52948	1817 aa		32.79	■■■□□ 2.84
SRRM2-223	ENST00000575701	ATP10D	Q9P241	1426 aa		32.79	■■■□□ 2.84
SRRM2-223	ENST00000575701	SENP3-EIF4A1	A0A087X0R7	540 aa		32.79	■■■□□ 2.84
SRRM2-223	ENST00000575701	WDR63	Q8IWG1	891 aa		32.79	■■■□□ 2.84
SRRM2-223	ENST00000575701	CNBD1	Q8NA66	436 aa		32.79	■■■□□ 2.84
SRRM2-223	ENST00000575701	NECTIN2	Q92692	538 aa		32.79	■■■□□ 2.84
SRRM2-223	ENST00000575701	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.79	■■■□□ 2.84
SRRM2-223	ENST00000575701	HLF	Q16534	295 aa		32.78	■■■□□ 2.84
SRRM2-223	ENST00000575701	PROSER3	Q2NL68	480 aa		32.78	■■■□□ 2.84
SRRM2-223	ENST00000575701	PRR5L	Q6MZQ0	368 aa		32.78	■■■□□ 2.84
SRRM2-223	ENST00000575701	DBF4	Q9UBU7	674 aa	Predicted RBP	32.78	■■■□□ 2.84
SRRM2-223	ENST00000575701	PDZRN3	Q9UPQ7	1066 aa		32.78	■■■□□ 2.84
SRRM2-223	ENST00000575701	NPHP1	O15259	732 aa		32.77	■■■□□ 2.84
SRRM2-223	ENST00000575701	DLEC1	Q9Y238	1755 aa		32.76	■■■□□ 2.84
SRRM2-223	ENST00000575701	ST5	P78524	1137 aa		32.76	■■■□□ 2.83
SRRM2-223	ENST00000575701	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.76	■■■□□ 2.83
SRRM2-223	ENST00000575701	BRIP1	Q9BX63	1249 aa		32.76	■■■□□ 2.83
SRRM2-223	ENST00000575701	ZBTB3	Q9H5J0	574 aa		32.76	■■■□□ 2.83
SRRM2-223	ENST00000575701	PIM2	Q9P1W9	311 aa		32.76	■■■□□ 2.83
SRRM2-223	ENST00000575701	CHPF2	Q9P2E5	772 aa		32.76	■■■□□ 2.83
SRRM2-223	ENST00000575701	ANXA1	P04083	346 aa		32.75	■■■□□ 2.83
SRRM2-223	ENST00000575701	KCNA3	P22001	575 aa		32.75	■■■□□ 2.83
SRRM2-223	ENST00000575701	ANKRD31	Q8N7Z5	1873 aa		32.74	■■■□□ 2.83
SRRM2-223	ENST00000575701	YY1	P25490	414 aa		32.74	■■■□□ 2.83
SRRM2-223	ENST00000575701	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.74	■■■□□ 2.83
SRRM2-223	ENST00000575701	SALL2	Q9Y467	1007 aa	Predicted RBP	32.74	■■■□□ 2.83
SRRM2-223	ENST00000575701	PDE6B	P35913	854 aa		32.73	■■■□□ 2.83
SRRM2-223	ENST00000575701	TPTE2	Q6XPS3	522 aa		32.73	■■■□□ 2.83
SRRM2-223	ENST00000575701	TSR2	Q969E8	191 aa	Known RBP	32.73	■■■□□ 2.83
SRRM2-223	ENST00000575701	WWC3	Q9ULE0	1092 aa		32.73	■■■□□ 2.83
SRRM2-223	ENST00000575701	CHRNA5	P30532	468 aa		32.72	■■■□□ 2.83
SRRM2-223	ENST00000575701	DIEXF	Q68CQ4	756 aa	Known RBP	32.72	■■■□□ 2.83
SRRM2-223	ENST00000575701	COPS6	Q7L5N1	327 aa		32.72	■■■□□ 2.83
SRRM2-223	ENST00000575701	C8orf58	Q8NAV2	365 aa		32.72	■■■□□ 2.83
SRRM2-223	ENST00000575701	XAGE3	Q8WTP9	111 aa		32.72	■■■□□ 2.83
SRRM2-223	ENST00000575701	HYPK	Q9NX55	129 aa		32.72	■■■□□ 2.83
SRRM2-223	ENST00000575701	BCS1L	Q9Y276	419 aa		32.72	■■■□□ 2.83
SRRM2-223	ENST00000575701	GOLGB1	Q14789	3259 aa	Known RBP	32.71	■■■□□ 2.83
SRRM2-223	ENST00000575701	ARFGEF1	Q9Y6D6	1849 aa		32.71	■■■□□ 2.83
SRRM2-223	ENST00000575701	UTRN	P46939	3433 aa		32.71	■■■□□ 2.83
SRRM2-223	ENST00000575701	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.7	■■■□□ 2.83
SRRM2-223	ENST00000575701		H0YIN7	160 aa		32.7	■■■□□ 2.83
SRRM2-223	ENST00000575701	ELL2	O00472	640 aa	Predicted RBP	32.7	■■■□□ 2.83
SRRM2-223	ENST00000575701	DALRD3	Q5D0E6	543 aa	Known RBP	32.7	■■■□□ 2.83
SRRM2-223	ENST00000575701	NYX	Q9GZU5	481 aa		32.7	■■■□□ 2.83
SRRM2-223	ENST00000575701	HSP90AB3P	Q58FF7	597 aa		32.69	■■■□□ 2.82
SRRM2-223	ENST00000575701	C2CD5	Q86YS7	1000 aa		32.69	■■■□□ 2.82
SRRM2-223	ENST00000575701	AIMP1	Q12904	312 aa	Known RBP	32.68	■■■□□ 2.82
SRRM2-223	ENST00000575701	ZNF34	Q8IZ26	560 aa		32.68	■■■□□ 2.82
SRRM2-223	ENST00000575701	FANCI	Q9NVI1	1328 aa		32.68	■■■□□ 2.82
SRRM2-223	ENST00000575701	ANKRD36C	Q5JPF3	1778 aa		32.68	■■■□□ 2.82
SRRM2-223	ENST00000575701	CCDC30	Q5VVM6	783 aa		32.67	■■■□□ 2.82
SRRM2-223	ENST00000575701	PARP10	Q53GL7	1025 aa		32.66	■■■□□ 2.82
SRRM2-223	ENST00000575701	COL11A2	P13942	1736 aa	Predicted RBP	32.65	■■■□□ 2.82
SRRM2-223	ENST00000575701	GPT	P24298	496 aa		32.64	■■■□□ 2.82
SRRM2-223	ENST00000575701	GTF2E1	P29083	439 aa	Predicted RBP	32.64	■■■□□ 2.82
SRRM2-223	ENST00000575701	TWISTNB	Q3B726	338 aa	Predicted RBP	32.64	■■■□□ 2.82
SRRM2-223	ENST00000575701	UBN2	Q6ZU65	1347 aa		32.64	■■■□□ 2.82
SRRM2-223	ENST00000575701	CCDC24	Q8N4L8	307 aa		32.64	■■■□□ 2.82
SRRM2-223	ENST00000575701	TSPYL6	Q8N831	410 aa		32.64	■■■□□ 2.82
SRRM2-223	ENST00000575701	PLBD2	Q8NHP8	589 aa		32.64	■■■□□ 2.82
SRRM2-223	ENST00000575701	MYH16	Q9H6N6	1097 aa		32.64	■■■□□ 2.82
SRRM2-223	ENST00000575701	FAM177B	A6PVY3	158 aa		32.63	■■■□□ 2.81
SRRM2-223	ENST00000575701	GOLGA2	Q08379	1002 aa		32.63	■■■□□ 2.81
SRRM2-223	ENST00000575701	PPP1R42	Q7Z4L9	355 aa		32.63	■■■□□ 2.81
SRRM2-223	ENST00000575701	ZNF521	Q96K83	1311 aa		32.62	■■■□□ 2.81
SRRM2-223	ENST00000575701	ANKRD13D	Q6ZTN6	518 aa		32.62	■■■□□ 2.81
SRRM2-223	ENST00000575701	TTLL6	Q8N841	843 aa		32.62	■■■□□ 2.81
SRRM2-223	ENST00000575701	RIC1	Q4ADV7	1423 aa		32.61	■■■□□ 2.81
SRRM2-223	ENST00000575701	TCIRG1	Q13488	830 aa		32.6	■■■□□ 2.81
SRRM2-223	ENST00000575701	STK31	Q9BXU1	1019 aa		32.6	■■■□□ 2.81
SRRM2-223	ENST00000575701	RNF123	Q5XPI4	1314 aa		32.59	■■■□□ 2.81
SRRM2-223	ENST00000575701	SUSD4	Q5VX71	490 aa		32.59	■■■□□ 2.81
SRRM2-223	ENST00000575701	STYK1	Q6J9G0	422 aa		32.59	■■■□□ 2.81
SRRM2-223	ENST00000575701	KLRG2	A4D1S0	409 aa	Predicted RBP	32.58	■■■□□ 2.81
SRRM2-223	ENST00000575701	SRGN	P10124	158 aa		32.58	■■■□□ 2.81
SRRM2-223	ENST00000575701	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.58	■■■□□ 2.81	1e-20	■■□□□ 11.5
SRRM2-223	ENST00000575701	ARFGEF2	Q9Y6D5	1785 aa		32.58	■■■□□ 2.81
SRRM2-223	ENST00000575701	NTSR2	O95665	410 aa		32.57	■■■□□ 2.8
SRRM2-223	ENST00000575701	MASTL	Q96GX5	879 aa		32.57	■■■□□ 2.8
SRRM2-223	ENST00000575701	CNKSR1	Q969H4	720 aa		32.56	■■■□□ 2.8
SRRM2-223	ENST00000575701	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.56	■■■□□ 2.8
SRRM2-223	ENST00000575701	ABCC12	Q96J65	1359 aa		32.56	■■■□□ 2.8
SRRM2-223	ENST00000575701	DDX58	O95786	925 aa	Known RBP	32.55	■■■□□ 2.8
SRRM2-223	ENST00000575701	ERFE	Q4G0M1	354 aa		32.55	■■■□□ 2.8
SRRM2-223	ENST00000575701	ARHGAP27	Q6ZUM4	889 aa		32.55	■■■□□ 2.8
SRRM2-223	ENST00000575701	NUTM1	Q86Y26	1132 aa		32.55	■■■□□ 2.8
SRRM2-223	ENST00000575701	UTP14A	Q9BVJ6	771 aa	Known RBP	32.55	■■■□□ 2.8
SRRM2-223	ENST00000575701	PHAX	Q9H814	394 aa	Known RBP	32.55	■■■□□ 2.8
SRRM2-223	ENST00000575701	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.54	■■■□□ 2.8
SRRM2-223	ENST00000575701	NPR1	P16066	1061 aa		32.54	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms