RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 MAP3K15Q6ZN16 1313 aa26.86■■□□□ 1.89
HCFC1R1-208ENST00000575214 CCER2I3L3R5 266 aa26.85■■□□□ 1.89
HCFC1R1-208ENST00000575214 RGL2O15211 777 aa26.85■■□□□ 1.89
HCFC1R1-208ENST00000575214 DPEP1P16444 411 aa26.85■■□□□ 1.89
HCFC1R1-208ENST00000575214 HLFQ16534 295 aa26.85■■□□□ 1.89
HCFC1R1-208ENST00000575214 DIEXFQ68CQ4 756 aaKnown RBP26.85■■□□□ 1.89
HCFC1R1-208ENST00000575214 ERVV-1B6SEH8 477 aa26.84■■□□□ 1.89
HCFC1R1-208ENST00000575214 NPHP1O15259 732 aa26.84■■□□□ 1.89
HCFC1R1-208ENST00000575214 TSR2Q969E8 191 aaKnown RBP26.84■■□□□ 1.89
HCFC1R1-208ENST00000575214 ZBTB3Q9H5J0 574 aa26.84■■□□□ 1.89
HCFC1R1-208ENST00000575214 IL16Q14005 1332 aa26.84■■□□□ 1.89
HCFC1R1-208ENST00000575214 ELL2O00472 640 aaPredicted RBP26.84■■□□□ 1.89
HCFC1R1-208ENST00000575214 LRP10Q7Z4F1 713 aa26.84■■□□□ 1.89
HCFC1R1-208ENST00000575214 DDX21Q9NR30 783 aaKnown RBP eCLIP26.84■■□□□ 1.89
HCFC1R1-208ENST00000575214 CHPF2Q9P2E5 772 aa26.84■■□□□ 1.89
HCFC1R1-208ENST00000575214 NIP7Q9Y221 180 aaKnown RBP eCLIP26.84■■□□□ 1.89
HCFC1R1-208ENST00000575214 AFDNP55196 1824 aaKnown RBP26.83■■□□□ 1.89
HCFC1R1-208ENST00000575214 NRXN2Q9P2S2 1712 aa26.83■■□□□ 1.89
HCFC1R1-208ENST00000575214 GRIN3BO60391 1043 aa26.83■■□□□ 1.88
HCFC1R1-208ENST00000575214 KIAA1551Q9HCM1 1747 aa26.82■■□□□ 1.88
HCFC1R1-208ENST00000575214 CNBD1Q8NA66 436 aa26.82■■□□□ 1.88
HCFC1R1-208ENST00000575214 N4BP2Q86UW6 1770 aaPredicted RBP26.82■■□□□ 1.88
HCFC1R1-208ENST00000575214 AIMP1Q12904 312 aaKnown RBP26.81■■□□□ 1.88
HCFC1R1-208ENST00000575214 PRR5LQ6MZQ0 368 aa26.81■■□□□ 1.88
HCFC1R1-208ENST00000575214 NBPF5PQ86XG9 351 aaPredicted RBP26.81■■□□□ 1.88
HCFC1R1-208ENST00000575214 WDR63Q8IWG1 891 aa26.81■■□□□ 1.88
HCFC1R1-208ENST00000575214 C8orf58Q8NAV2 365 aa26.81■■□□□ 1.88
HCFC1R1-208ENST00000575214 GOLGB1Q14789 3259 aaKnown RBP26.8■■□□□ 1.88
HCFC1R1-208ENST00000575214 CHRNA5P30532 468 aa26.8■■□□□ 1.88
HCFC1R1-208ENST00000575214 CCDC24Q8N4L8 307 aa26.8■■□□□ 1.88
HCFC1R1-208ENST00000575214 XAGE3Q8WTP9 111 aa26.8■■□□□ 1.88
HCFC1R1-208ENST00000575214 DBF4Q9UBU7 674 aaPredicted RBP26.8■■□□□ 1.88
HCFC1R1-208ENST00000575214 YY1P25490 414 aa26.79■■□□□ 1.88
HCFC1R1-208ENST00000575214 ST5P78524 1137 aa26.79■■□□□ 1.88
HCFC1R1-208ENST00000575214 COPS6Q7L5N1 327 aa26.79■■□□□ 1.88
HCFC1R1-208ENST00000575214 BCS1LQ9Y276 419 aa26.79■■□□□ 1.88
HCFC1R1-208ENST00000575214 FAM177BA6PVY3 158 aa26.78■■□□□ 1.88
HCFC1R1-208ENST00000575214 KCNA3P22001 575 aa26.78■■□□□ 1.88
HCFC1R1-208ENST00000575214 GIGYF2Q6Y7W6 1299 aaKnown RBP26.77■■□□□ 1.88
HCFC1R1-208ENST00000575214 PIM2Q9P1W9 311 aa26.77■■□□□ 1.88
HCFC1R1-208ENST00000575214 ATP10DQ9P241 1426 aa26.77■■□□□ 1.88
HCFC1R1-208ENST00000575214 TSPYL6Q8N831 410 aa26.76■■□□□ 1.87
HCFC1R1-208ENST00000575214 BRIP1Q9BX63 1249 aa26.76■■□□□ 1.87
HCFC1R1-208ENST00000575214 GPTP24298 496 aa26.75■■□□□ 1.87
HCFC1R1-208ENST00000575214 TPTE2Q6XPS3 522 aa26.75■■□□□ 1.87
HCFC1R1-208ENST00000575214 C2CD5Q86YS7 1000 aa26.75■■□□□ 1.87
HCFC1R1-208ENST00000575214 HYPKQ9NX55 129 aa26.75■■□□□ 1.87
HCFC1R1-208ENST00000575214 FANCIQ9NVI1 1328 aa26.75■■□□□ 1.87
HCFC1R1-208ENST00000575214 PDE6BP35913 854 aa26.74■■□□□ 1.87
HCFC1R1-208ENST00000575214 CHMP4AQ9BY43 222 aa26.74■■□□□ 1.87
HCFC1R1-208ENST00000575214 H0YIN7 160 aa26.73■■□□□ 1.87
HCFC1R1-208ENST00000575214 DALRD3Q5D0E6 543 aaKnown RBP26.73■■□□□ 1.87
HCFC1R1-208ENST00000575214 GTF2E1P29083 439 aaPredicted RBP26.72■■□□□ 1.87
HCFC1R1-208ENST00000575214 TWISTNBQ3B726 338 aaPredicted RBP26.72■■□□□ 1.87
HCFC1R1-208ENST00000575214 CCDC30Q5VVM6 783 aa26.72■■□□□ 1.87
HCFC1R1-208ENST00000575214 MIER1Q8N108 512 aa26.72■■□□□ 1.87
HCFC1R1-208ENST00000575214 NUP98P52948 1817 aa26.72■■□□□ 1.87
HCFC1R1-208ENST00000575214 UBN2Q6ZU65 1347 aa26.71■■□□□ 1.87
HCFC1R1-208ENST00000575214 ZNF34Q8IZ26 560 aa26.71■■□□□ 1.87
HCFC1R1-208ENST00000575214 NYXQ9GZU5 481 aa26.71■■□□□ 1.87
HCFC1R1-208ENST00000575214 SPINK5Q9NQ38 1064 aaPredicted RBP26.71■■□□□ 1.87
HCFC1R1-208ENST00000575214 PDZRN3Q9UPQ7 1066 aa26.71■■□□□ 1.87
HCFC1R1-208ENST00000575214 GOLGA2Q08379 1002 aa26.7■■□□□ 1.86
HCFC1R1-208ENST00000575214 HSP90AB3PQ58FF7 597 aa26.7■■□□□ 1.86
HCFC1R1-208ENST00000575214 MYH16Q9H6N6 1097 aa26.7■■□□□ 1.86
HCFC1R1-208ENST00000575214 BRCA1P38398 1863 aaKnown RBP26.69■■□□□ 1.86
HCFC1R1-208ENST00000575214 ANKRD31Q8N7Z5 1873 aa26.69■■□□□ 1.86
HCFC1R1-208ENST00000575214 ANKRD13DQ6ZTN6 518 aa26.69■■□□□ 1.86
HCFC1R1-208ENST00000575214 PLBD2Q8NHP8 589 aa26.69■■□□□ 1.86
HCFC1R1-208ENST00000575214 ZNF622Q969S3 477 aaKnown RBP eCLIP26.69■■□□□ 1.86
HCFC1R1-208ENST00000575214 PARP10Q53GL7 1025 aa26.68■■□□□ 1.86
HCFC1R1-208ENST00000575214 SUSD4Q5VX71 490 aa26.68■■□□□ 1.86
HCFC1R1-208ENST00000575214 ZNF521Q96K83 1311 aa26.67■■□□□ 1.86
HCFC1R1-208ENST00000575214 PPP1R42Q7Z4L9 355 aa26.67■■□□□ 1.86
HCFC1R1-208ENST00000575214 NUTM1Q86Y26 1132 aa26.67■■□□□ 1.86
HCFC1R1-208ENST00000575214 TTLL6Q8N841 843 aa26.67■■□□□ 1.86
HCFC1R1-208ENST00000575214 STK31Q9BXU1 1019 aa26.67■■□□□ 1.86
HCFC1R1-208ENST00000575214 PHAXQ9H814 394 aaKnown RBP26.67■■□□□ 1.86
HCFC1R1-208ENST00000575214 IBTKQ9P2D0 1353 aaPredicted RBP26.66■■□□□ 1.86
HCFC1R1-208ENST00000575214 EXOSC9Q06265 439 aaKnown RBP26.66■■□□□ 1.86
HCFC1R1-208ENST00000575214 TCIRG1Q13488 830 aa26.66■■□□□ 1.86
HCFC1R1-208ENST00000575214 CHD4Q14839 1912 aa26.65■■□□□ 1.86
HCFC1R1-208ENST00000575214 TCERG1O14776 1098 aaKnown RBP26.65■■□□□ 1.86
HCFC1R1-208ENST00000575214 ERFEQ4G0M1 354 aa26.65■■□□□ 1.86
HCFC1R1-208ENST00000575214 ARHGAP27Q6ZUM4 889 aa26.65■■□□□ 1.86
HCFC1R1-208ENST00000575214 NTSR2O95665 410 aa26.64■■□□□ 1.86
HCFC1R1-208ENST00000575214 ABCC12Q96J65 1359 aa26.64■■□□□ 1.85
HCFC1R1-208ENST00000575214 DLEC1Q9Y238 1755 aa26.64■■□□□ 1.85
HCFC1R1-208ENST00000575214 SRGNP10124 158 aa26.63■■□□□ 1.85
HCFC1R1-208ENST00000575214 RIC3Q7Z5B4 369 aa26.63■■□□□ 1.85
HCFC1R1-208ENST00000575214 UTP14AQ9BVJ6 771 aaKnown RBP26.63■■□□□ 1.85
HCFC1R1-208ENST00000575214 COL11A2P13942 1736 aaPredicted RBP26.63■■□□□ 1.85
HCFC1R1-208ENST00000575214 MASTLQ96GX5 879 aa26.62■■□□□ 1.85
HCFC1R1-208ENST00000575214 STYK1Q6J9G0 422 aa26.61■■□□□ 1.85
HCFC1R1-208ENST00000575214 NLRP10Q86W26 655 aa26.61■■□□□ 1.85
HCFC1R1-208ENST00000575214 VAMP4O75379 141 aa26.6■■□□□ 1.85
HCFC1R1-208ENST00000575214 DDX58O95786 925 aaKnown RBP26.6■■□□□ 1.85
HCFC1R1-208ENST00000575214 CNKSR1Q969H4 720 aa26.6■■□□□ 1.85
HCFC1R1-208ENST00000575214 ARFGEF1Q9Y6D6 1849 aa26.6■■□□□ 1.85
HCFC1R1-208ENST00000575214 ANKRD36CQ5JPF3 1778 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms