RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 BCS1LQ9Y276 419 aa21.08■□□□□ 0.97
NDE1-205ENST00000572756 COL11A2P13942 1736 aaPredicted RBP21.07■□□□□ 0.96
NDE1-205ENST00000572756 ERVV-1B6SEH8 477 aa21.07■□□□□ 0.96
NDE1-205ENST00000572756 MYL6BP14649 208 aa21.07■□□□□ 0.96
NDE1-205ENST00000572756 TTLL7Q6ZT98 887 aa21.07■□□□□ 0.96
NDE1-205ENST00000572756 MAP3K15Q6ZN16 1313 aa21.06■□□□□ 0.96
NDE1-205ENST00000572756 EIF2S2P20042 333 aaKnown RBP21.06■□□□□ 0.96
NDE1-205ENST00000572756 NGEFQ8N5V2 710 aa21.06■□□□□ 0.96
NDE1-205ENST00000572756 ZNF784Q8NCA9 323 aaPredicted RBP21.06■□□□□ 0.96
NDE1-205ENST00000572756 MBIPQ9NS73 344 aa21.06■□□□□ 0.96
NDE1-205ENST00000572756 IFT57Q9NWB7 429 aa21.06■□□□□ 0.96
NDE1-205ENST00000572756 HOXB7P09629 217 aa21.05■□□□□ 0.96
NDE1-205ENST00000572756 CALD1Q05682 793 aaKnown RBP21.05■□□□□ 0.96
NDE1-205ENST00000572756 PROSER3Q2NL68 480 aa21.05■□□□□ 0.96
NDE1-205ENST00000572756 CNBD1Q8NA66 436 aa21.05■□□□□ 0.96
NDE1-205ENST00000572756 BRIP1Q9BX63 1249 aa21.05■□□□□ 0.96
NDE1-205ENST00000572756 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
NDE1-205ENST00000572756 CCDC27Q2M243 656 aa21.04■□□□□ 0.96
NDE1-205ENST00000572756 DALRD3Q5D0E6 543 aaKnown RBP21.04■□□□□ 0.96
NDE1-205ENST00000572756 NIP7Q9Y221 180 aaKnown RBP eCLIP21.04■□□□□ 0.96
NDE1-205ENST00000572756 ADCY9O60503 1353 aa21.03■□□□□ 0.96
NDE1-205ENST00000572756 NCBP3Q53F19 620 aaKnown RBP21.03■□□□□ 0.96
NDE1-205ENST00000572756 KIF6Q6ZMV9 814 aa21.03■□□□□ 0.96
NDE1-205ENST00000572756 CCDC24Q8N4L8 307 aa21.03■□□□□ 0.96
NDE1-205ENST00000572756 ANXA1P04083 346 aa21.02■□□□□ 0.96
NDE1-205ENST00000572756 GNAI1P63096 354 aa21.02■□□□□ 0.96
NDE1-205ENST00000572756 C2CD5Q86YS7 1000 aa21.02■□□□□ 0.96
NDE1-205ENST00000572756 H0YIN7 160 aa21.01■□□□□ 0.95
NDE1-205ENST00000572756 PDE6BP35913 854 aa21.01■□□□□ 0.95
NDE1-205ENST00000572756 NBPF5PQ86XG9 351 aaPredicted RBP21.01■□□□□ 0.95
NDE1-205ENST00000572756 NECTIN2Q92692 538 aa21.01■□□□□ 0.95
NDE1-205ENST00000572756 ZBTB3Q9H5J0 574 aa21.01■□□□□ 0.95
NDE1-205ENST00000572756 DDX21Q9NR30 783 aaKnown RBP eCLIP21.01■□□□□ 0.95
NDE1-205ENST00000572756 PDZRN3Q9UPQ7 1066 aa21.01■□□□□ 0.95
NDE1-205ENST00000572756 ST5P78524 1137 aa21■□□□□ 0.95
NDE1-205ENST00000572756 DUSP27Q5VZP5 1158 aa21■□□□□ 0.95
NDE1-205ENST00000572756 GIGYF2Q6Y7W6 1299 aaKnown RBP21■□□□□ 0.95
NDE1-205ENST00000572756 WWC1Q8IX03 1113 aa21■□□□□ 0.95
NDE1-205ENST00000572756 ANKRD36CQ5JPF3 1778 aa21■□□□□ 0.95
NDE1-205ENST00000572756 ARFGEF2Q9Y6D5 1785 aa21■□□□□ 0.95
NDE1-205ENST00000572756 HDGFL1Q5TGJ6 251 aa20.99■□□□□ 0.95
NDE1-205ENST00000572756 UBN2Q6ZU65 1347 aa20.99■□□□□ 0.95
NDE1-205ENST00000572756 SBF1O95248 1867 aa20.98■□□□□ 0.95
NDE1-205ENST00000572756 SENP3-EIF4A1A0A087X0R7 540 aa20.98■□□□□ 0.95
NDE1-205ENST00000572756 NPHP1O15259 732 aa20.98■□□□□ 0.95
NDE1-205ENST00000572756 TPTE2Q6XPS3 522 aa20.98■□□□□ 0.95
NDE1-205ENST00000572756 ARHGAP27Q6ZUM4 889 aa20.98■□□□□ 0.95
NDE1-205ENST00000572756 ZNF34Q8IZ26 560 aa20.98■□□□□ 0.95
NDE1-205ENST00000572756 TTLL6Q8N841 843 aa20.98■□□□□ 0.95
NDE1-205ENST00000572756 CHPF2Q9P2E5 772 aa20.98■□□□□ 0.95
NDE1-205ENST00000572756 IBTKQ9P2D0 1353 aaPredicted RBP20.97■□□□□ 0.95
NDE1-205ENST00000572756 CACNA1SQ13698 1873 aa20.97■□□□□ 0.95
NDE1-205ENST00000572756 KLRG2A4D1S0 409 aaPredicted RBP20.97■□□□□ 0.95
NDE1-205ENST00000572756 COPS6Q7L5N1 327 aa20.97■□□□□ 0.95
NDE1-205ENST00000572756 XAGE3Q8WTP9 111 aa20.97■□□□□ 0.95
NDE1-205ENST00000572756 TNRC6CQ9HCJ0 1690 aaKnown RBP20.96■□□□□ 0.95
NDE1-205ENST00000572756 SRGNP10124 158 aa20.96■□□□□ 0.95
NDE1-205ENST00000572756 SLX4Q8IY92 1834 aa20.96■□□□□ 0.95
NDE1-205ENST00000572756 FAM177BA6PVY3 158 aa20.95■□□□□ 0.94
NDE1-205ENST00000572756 GPTP24298 496 aa20.95■□□□□ 0.94
NDE1-205ENST00000572756 C8orf58Q8NAV2 365 aa20.95■□□□□ 0.94
NDE1-205ENST00000572756 DBF4Q9UBU7 674 aaPredicted RBP20.95■□□□□ 0.94
NDE1-205ENST00000572756 IL16Q14005 1332 aa20.95■□□□□ 0.94
NDE1-205ENST00000572756 ABCC12Q96J65 1359 aa20.95■□□□□ 0.94
NDE1-205ENST00000572756 STYK1Q6J9G0 422 aa20.94■□□□□ 0.94
NDE1-205ENST00000572756 ZNF622Q969S3 477 aaKnown RBP eCLIP20.94■□□□□ 0.941e-8■□□□□ 8.5
NDE1-205ENST00000572756 NYXQ9GZU5 481 aa20.94■□□□□ 0.94
NDE1-205ENST00000572756 RIC1Q4ADV7 1423 aa20.94■□□□□ 0.94
NDE1-205ENST00000572756 AIMP1Q12904 312 aaKnown RBP20.93■□□□□ 0.94
NDE1-205ENST00000572756 SUSD4Q5VX71 490 aa20.93■□□□□ 0.94
NDE1-205ENST00000572756 FAM9BQ8IZU0 186 aa20.93■□□□□ 0.94
NDE1-205ENST00000572756 MASTLQ96GX5 879 aa20.93■□□□□ 0.94
NDE1-205ENST00000572756 FER1L6Q2WGJ9 1857 aa20.92■□□□□ 0.94
NDE1-205ENST00000572756 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
NDE1-205ENST00000572756 NTSR2O95665 410 aa20.92■□□□□ 0.94
NDE1-205ENST00000572756 NUTM1Q86Y26 1132 aa20.92■□□□□ 0.94
NDE1-205ENST00000572756 TSR2Q969E8 191 aaKnown RBP20.92■□□□□ 0.94
NDE1-205ENST00000572756 HYPKQ9NX55 129 aa20.92■□□□□ 0.94
NDE1-205ENST00000572756 CCDC88AQ3V6T2 1871 aa20.91■□□□□ 0.94
NDE1-205ENST00000572756 ERFEQ4G0M1 354 aa20.91■□□□□ 0.94
NDE1-205ENST00000572756 PARP10Q53GL7 1025 aa20.91■□□□□ 0.94
NDE1-205ENST00000572756 TSPYL6Q8N831 410 aa20.91■□□□□ 0.94
NDE1-205ENST00000572756 CNKSR1Q969H4 720 aa20.91■□□□□ 0.94
NDE1-205ENST00000572756 NPR1P16066 1061 aa20.9■□□□□ 0.94
NDE1-205ENST00000572756 GTF2E1P29083 439 aaPredicted RBP20.9■□□□□ 0.94
NDE1-205ENST00000572756 WDR63Q8IWG1 891 aa20.9■□□□□ 0.94
NDE1-205ENST00000572756 TCIRG1Q13488 830 aa20.89■□□□□ 0.93
NDE1-205ENST00000572756 CRY2Q49AN0 593 aa20.89■□□□□ 0.93
NDE1-205ENST00000572756 HSP90AB3PQ58FF7 597 aa20.89■□□□□ 0.93
NDE1-205ENST00000572756 C9orf131Q5VYM1 1079 aa20.89■□□□□ 0.93
NDE1-205ENST00000572756 PRPF40BQ6NWY9 871 aaKnown RBP20.89■□□□□ 0.93
NDE1-205ENST00000572756 PPP1R42Q7Z4L9 355 aa20.89■□□□□ 0.93
NDE1-205ENST00000572756 PLBD2Q8NHP8 589 aa20.89■□□□□ 0.93
NDE1-205ENST00000572756 NFKBIEO00221 500 aa20.88■□□□□ 0.93
NDE1-205ENST00000572756 RASSF7Q02833 373 aa20.88■□□□□ 0.93
NDE1-205ENST00000572756 ANKRD13DQ6ZTN6 518 aa20.88■□□□□ 0.93
NDE1-205ENST00000572756 SALL2Q9Y467 1007 aaPredicted RBP20.88■□□□□ 0.93
NDE1-205ENST00000572756 C21orf2O43822 256 aa20.87■□□□□ 0.93
NDE1-205ENST00000572756 PRELPP51888 382 aa20.87■□□□□ 0.93
NDE1-205ENST00000572756 NLRP10Q86W26 655 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms