RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 SETDB2Q96T68 719 aa23.51■■□□□ 1.35
LITAF-204ENST00000570798 WWC3Q9ULE0 1092 aa23.51■■□□□ 1.35
LITAF-204ENST00000570798 ZNF652Q9Y2D9 606 aa23.51■■□□□ 1.35
LITAF-204ENST00000570798 ERVV-1B6SEH8 477 aa23.5■■□□□ 1.35
LITAF-204ENST00000570798 HOXB7P09629 217 aa23.5■■□□□ 1.35
LITAF-204ENST00000570798 HLFQ16534 295 aa23.5■■□□□ 1.35
LITAF-204ENST00000570798 TTLL7Q6ZT98 887 aa23.5■■□□□ 1.35
LITAF-204ENST00000570798 WWC1Q8IX03 1113 aa23.49■■□□□ 1.35
LITAF-204ENST00000570798 MAP3K15Q6ZN16 1313 aa23.49■■□□□ 1.35
LITAF-204ENST00000570798 SENP3-EIF4A1A0A087X0R7 540 aa23.48■■□□□ 1.35
LITAF-204ENST00000570798 PROSER3Q2NL68 480 aa23.48■■□□□ 1.35
LITAF-204ENST00000570798 PRR5LQ6MZQ0 368 aa23.48■■□□□ 1.35
LITAF-204ENST00000570798 CHRNA5P30532 468 aa23.47■■□□□ 1.35
LITAF-204ENST00000570798 PIM2Q9P1W9 311 aa23.47■■□□□ 1.35
LITAF-204ENST00000570798 ANXA1P04083 346 aa23.46■■□□□ 1.35
LITAF-204ENST00000570798 DUSP27Q5VZP5 1158 aa23.46■■□□□ 1.35
LITAF-204ENST00000570798 FAM9BQ8IZU0 186 aa23.46■■□□□ 1.35
LITAF-204ENST00000570798 DDX21Q9NR30 783 aaKnown RBP eCLIP23.46■■□□□ 1.35
LITAF-204ENST00000570798 NIP7Q9Y221 180 aaKnown RBP eCLIP23.46■■□□□ 1.35
LITAF-204ENST00000570798 KIF6Q6ZMV9 814 aa23.45■■□□□ 1.34
LITAF-204ENST00000570798 NECTIN2Q92692 538 aa23.45■■□□□ 1.34
LITAF-204ENST00000570798 BRIP1Q9BX63 1249 aa23.45■■□□□ 1.34
LITAF-204ENST00000570798 BCS1LQ9Y276 419 aa23.45■■□□□ 1.34
LITAF-204ENST00000570798 ATP10DQ9P241 1426 aa23.44■■□□□ 1.34
LITAF-204ENST00000570798 CNBD1Q8NA66 436 aa23.44■■□□□ 1.34
LITAF-204ENST00000570798 COL11A2P13942 1736 aaPredicted RBP23.44■■□□□ 1.34
LITAF-204ENST00000570798 IL16Q14005 1332 aa23.43■■□□□ 1.34
LITAF-204ENST00000570798 UTRNP46939 3433 aa23.43■■□□□ 1.34
LITAF-204ENST00000570798 HDGFL1Q5TGJ6 251 aa23.43■■□□□ 1.34
LITAF-204ENST00000570798 GIGYF2Q6Y7W6 1299 aaKnown RBP23.43■■□□□ 1.34
LITAF-204ENST00000570798 CCDC24Q8N4L8 307 aa23.43■■□□□ 1.34
LITAF-204ENST00000570798 ZBTB3Q9H5J0 574 aa23.43■■□□□ 1.34
LITAF-204ENST00000570798 ANKRD36CQ5JPF3 1778 aa23.42■■□□□ 1.34
LITAF-204ENST00000570798 CHPF2Q9P2E5 772 aa23.42■■□□□ 1.34
LITAF-204ENST00000570798 PDE6BP35913 854 aa23.41■■□□□ 1.34
LITAF-204ENST00000570798 DALRD3Q5D0E6 543 aaKnown RBP23.41■■□□□ 1.34
LITAF-204ENST00000570798 COPS6Q7L5N1 327 aa23.41■■□□□ 1.34
LITAF-204ENST00000570798 NBPF5PQ86XG9 351 aaPredicted RBP23.41■■□□□ 1.34
LITAF-204ENST00000570798 C2CD5Q86YS7 1000 aa23.41■■□□□ 1.34
LITAF-204ENST00000570798 C8orf58Q8NAV2 365 aa23.41■■□□□ 1.34
LITAF-204ENST00000570798 PDZRN3Q9UPQ7 1066 aa23.41■■□□□ 1.34
LITAF-204ENST00000570798 GOLGB1Q14789 3259 aaKnown RBP23.41■■□□□ 1.34
LITAF-204ENST00000570798 H0YIN7 160 aa23.4■■□□□ 1.34
LITAF-204ENST00000570798 ST5P78524 1137 aa23.4■■□□□ 1.34
LITAF-204ENST00000570798 TPTE2Q6XPS3 522 aa23.4■■□□□ 1.34
LITAF-204ENST00000570798 ZNF34Q8IZ26 560 aa23.4■■□□□ 1.34
LITAF-204ENST00000570798 XAGE3Q8WTP9 111 aa23.4■■□□□ 1.34
LITAF-204ENST00000570798 DBF4Q9UBU7 674 aaPredicted RBP23.4■■□□□ 1.34
LITAF-204ENST00000570798 WDR63Q8IWG1 891 aa23.39■■□□□ 1.33
LITAF-204ENST00000570798 UBN2Q6ZU65 1347 aa23.38■■□□□ 1.33
LITAF-204ENST00000570798 ELL2O00472 640 aaPredicted RBP23.38■■□□□ 1.33
LITAF-204ENST00000570798 TSR2Q969E8 191 aaKnown RBP23.38■■□□□ 1.33
LITAF-204ENST00000570798 SALL2Q9Y467 1007 aaPredicted RBP23.38■■□□□ 1.33
LITAF-204ENST00000570798 ARFGEF2Q9Y6D5 1785 aa23.37■■□□□ 1.33
LITAF-204ENST00000570798 CACNA1SQ13698 1873 aa23.37■■□□□ 1.33
LITAF-204ENST00000570798 NPHP1O15259 732 aa23.37■■□□□ 1.33
LITAF-204ENST00000570798 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
LITAF-204ENST00000570798 IBTKQ9P2D0 1353 aaPredicted RBP23.37■■□□□ 1.33
LITAF-204ENST00000570798 KLRG2A4D1S0 409 aaPredicted RBP23.36■■□□□ 1.33
LITAF-204ENST00000570798 CCER2I3L3R5 266 aa23.36■■□□□ 1.33
LITAF-204ENST00000570798 GPTP24298 496 aa23.36■■□□□ 1.33
LITAF-204ENST00000570798 TSPYL6Q8N831 410 aa23.36■■□□□ 1.33
LITAF-204ENST00000570798 HYPKQ9NX55 129 aa23.36■■□□□ 1.33
LITAF-204ENST00000570798 SBF1O95248 1867 aa23.35■■□□□ 1.33
LITAF-204ENST00000570798 FAM177BA6PVY3 158 aa23.35■■□□□ 1.33
LITAF-204ENST00000570798 SUSD4Q5VX71 490 aa23.35■■□□□ 1.33
LITAF-204ENST00000570798 TTLL6Q8N841 843 aa23.35■■□□□ 1.33
LITAF-204ENST00000570798 ZNF784Q8NCA9 323 aaPredicted RBP23.35■■□□□ 1.33
LITAF-204ENST00000570798 NYXQ9GZU5 481 aa23.35■■□□□ 1.33
LITAF-204ENST00000570798 TNRC6CQ9HCJ0 1690 aaKnown RBP23.35■■□□□ 1.33
LITAF-204ENST00000570798 SRGNP10124 158 aa23.34■■□□□ 1.33
LITAF-204ENST00000570798 ARHGAP27Q6ZUM4 889 aa23.34■■□□□ 1.33
LITAF-204ENST00000570798 SLX4Q8IY92 1834 aa23.33■■□□□ 1.33
LITAF-204ENST00000570798 ADCY9O60503 1353 aa23.33■■□□□ 1.33
LITAF-204ENST00000570798 PARP10Q53GL7 1025 aa23.33■■□□□ 1.33
LITAF-204ENST00000570798 STYK1Q6J9G0 422 aa23.33■■□□□ 1.33
LITAF-204ENST00000570798 RIC1Q4ADV7 1423 aa23.33■■□□□ 1.32
LITAF-204ENST00000570798 NTSR2O95665 410 aa23.32■■□□□ 1.32
LITAF-204ENST00000570798 TCIRG1Q13488 830 aa23.32■■□□□ 1.32
LITAF-204ENST00000570798 HSP90AB3PQ58FF7 597 aa23.32■■□□□ 1.32
LITAF-204ENST00000570798 ANKRD13DQ6ZTN6 518 aa23.32■■□□□ 1.32
LITAF-204ENST00000570798 PLBD2Q8NHP8 589 aa23.32■■□□□ 1.32
LITAF-204ENST00000570798 ZNF622Q969S3 477 aaKnown RBP eCLIP23.32■■□□□ 1.32
LITAF-204ENST00000570798 CHMP4AQ9BY43 222 aa23.32■■□□□ 1.32
LITAF-204ENST00000570798 FANCIQ9NVI1 1328 aa23.32■■□□□ 1.32
LITAF-204ENST00000570798 ABCC12Q96J65 1359 aa23.31■■□□□ 1.32
LITAF-204ENST00000570798 CACNA1FO60840 1977 aa23.31■■□□□ 1.32
LITAF-204ENST00000570798 GTF2E1P29083 439 aaPredicted RBP23.31■■□□□ 1.32
LITAF-204ENST00000570798 CCDC30Q5VVM6 783 aa23.31■■□□□ 1.32
LITAF-204ENST00000570798 NUTM1Q86Y26 1132 aa23.31■■□□□ 1.32
LITAF-204ENST00000570798 MASTLQ96GX5 879 aa23.31■■□□□ 1.32
LITAF-204ENST00000570798 SPINK5Q9NQ38 1064 aaPredicted RBP23.31■■□□□ 1.32
LITAF-204ENST00000570798 TWISTNBQ3B726 338 aaPredicted RBP23.3■■□□□ 1.32
LITAF-204ENST00000570798 ERFEQ4G0M1 354 aa23.3■■□□□ 1.32
LITAF-204ENST00000570798 PPP1R42Q7Z4L9 355 aa23.3■■□□□ 1.32
LITAF-204ENST00000570798 PHAXQ9H814 394 aaKnown RBP23.3■■□□□ 1.32
LITAF-204ENST00000570798 ZNF521Q96K83 1311 aa23.3■■□□□ 1.32
LITAF-204ENST00000570798 FER1L6Q2WGJ9 1857 aa23.29■■□□□ 1.32
LITAF-204ENST00000570798 CCDC88AQ3V6T2 1871 aa23.29■■□□□ 1.32
LITAF-204ENST00000570798 CNKSR1Q969H4 720 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms