RNA–Protein interactions for RNA: ENST00000567887.5

MACF1-232, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene MACF1, Length 24,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-232ENST00000567887 LRP2BPQ9P2M1 347 aa6.85□□□□□ -1.31
MACF1-232ENST00000567887 ZBTB12Q9Y330 459 aaPredicted RBP6.85□□□□□ -1.31
MACF1-232ENST00000567887 TRAK1Q9UPV9 953 aa6.85□□□□□ -1.31
MACF1-232ENST00000567887 BCAR3O75815 825 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 SKOR1P84550 965 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 POLR3DP05423 398 aaPredicted RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 DDX19BQ9UMR2 479 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 XRCC6P12956 609 aaKnown RBP eCLIP6.84□□□□□ -1.314e-7■■■■■ 28
MACF1-232ENST00000567887 CCDC25Q86WR0 208 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 SPINK5Q9NQ38 1064 aaPredicted RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 EEF2P13639 858 aaKnown RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 PPP1R21Q6ZMI0 780 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 GBP5Q96PP8 586 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 CKAP2LQ8IYA6 745 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 XAB2Q9HCS7 855 aaKnown RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 API5Q9BZZ5 524 aaKnown RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 STX6O43752 255 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 HSPA1LP34931 641 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 NUCKS1Q9H1E3 243 aaKnown RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 VCXQ9H320 206 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 ARID5AQ03989 594 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 PPP2R5DQ14738 602 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 TFIP11Q9UBB9 837 aaKnown RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 WDR46O15213 610 aaKnown RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 ATP2A2P16615 1042 aaKnown RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 GBP6Q6ZN66 633 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 C16orf45Q96MC5 204 aaPredicted RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 MINDY4BA8MYZ0 360 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 POTEB2H3BUK9 544 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 HMOX1P09601 288 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 PTGS1P23219 599 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 UAP1Q16222 522 aaPredicted RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 ANKRD1Q15327 319 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 SAMM50Q9Y512 469 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 KIF2AO00139 706 aaPredicted RBP6.84□□□□□ -1.31
MACF1-232ENST00000567887 CETN1Q12798 172 aa6.84□□□□□ -1.31
MACF1-232ENST00000567887 TXNDC9O14530 226 aa6.84□□□□□ -1.32
MACF1-232ENST00000567887 NUP62CLQ9H1M0 184 aa6.84□□□□□ -1.32
MACF1-232ENST00000567887 SEC63Q9UGP8 760 aaKnown RBP6.84□□□□□ -1.32
MACF1-232ENST00000567887 TCERG1LQ5VWI1 586 aa6.84□□□□□ -1.32
MACF1-232ENST00000567887 VGLL3A8MV65 326 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 RAP1GDS1P52306 607 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 GJC1P36383 396 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 LRRC45Q96CN5 670 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 FBXO2Q9UK22 296 aaPredicted RBP6.83□□□□□ -1.32
MACF1-232ENST00000567887 CTAGE8P0CG41 777 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 CAPN2P17655 700 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 CTAGE4Q8IX94 777 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 DDX41Q9UJV9 622 aaKnown RBP6.83□□□□□ -1.32
MACF1-232ENST00000567887 EBAG9O00559 213 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 CALCOCO2Q13137 446 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 OPHN1O60890 802 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 TRIM7Q9C029 511 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 NSRP1Q9H0G5 558 aaKnown RBP6.83□□□□□ -1.32
MACF1-232ENST00000567887 VPS18Q9P253 973 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 CUL5Q93034 780 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 C1orf115Q9H7X2 142 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 HIP1O00291 1037 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 GUCY1B3Q02153 619 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 GEN1Q17RS7 908 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 HNRNPCL2B2RXH8 293 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 HNRNPCL1O60812 293 aaKnown RBP6.83□□□□□ -1.32
MACF1-232ENST00000567887 IVLP07476 585 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 GRM1Q13255 1194 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 MKNK2Q9HBH9 465 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 CWC27Q6UX04 472 aaKnown RBP6.83□□□□□ -1.32
MACF1-232ENST00000567887 RIOK3O14730 519 aaKnown RBP6.83□□□□□ -1.32
MACF1-232ENST00000567887 KRT85P78386 507 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 KIF6Q6ZMV9 814 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 RNASE9P60153 205 aaKnown RBP6.83□□□□□ -1.32
MACF1-232ENST00000567887 PRKRIP1Q9H875 184 aaPredicted RBP6.83□□□□□ -1.32
MACF1-232ENST00000567887 GAS8O95995 478 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 GNL1P36915 607 aaPredicted RBP6.83□□□□□ -1.32
MACF1-232ENST00000567887 MCM2P49736 904 aa6.83□□□□□ -1.32
MACF1-232ENST00000567887 CCDC85AQ96PX6 553 aaPredicted RBP6.82□□□□□ -1.32
MACF1-232ENST00000567887 ZSCAN32Q9NX65 697 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 NBPF3Q9H094 633 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 RABEP2Q9H5N1 569 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 RRP1P56182 461 aaKnown RBP6.82□□□□□ -1.32
MACF1-232ENST00000567887 GABPAQ06546 454 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 TXNDC16Q9P2K2 825 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 CEP131Q9UPN4 1083 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 WDR33Q9C0J8 1336 aaKnown RBP6.82□□□□□ -1.32
MACF1-232ENST00000567887 RNF8O76064 485 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 ZFYVE1Q9HBF4 777 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 SPDL1Q96EA4 605 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 CACYBPQ9HB71 228 aaKnown RBP6.82□□□□□ -1.32
MACF1-232ENST00000567887 BAG4O95429 457 aaKnown RBP6.82□□□□□ -1.32
MACF1-232ENST00000567887 CDR2Q01850 454 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 TPX2Q9ULW0 747 aaKnown RBP6.82□□□□□ -1.32
MACF1-232ENST00000567887 BAG2O95816 211 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 MKL2Q9ULH7 1088 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 LMNTD2Q8IXW0 634 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 CIZ1Q9ULV3 898 aaPredicted RBP6.82□□□□□ -1.32
MACF1-232ENST00000567887 CCDC50Q8IVM0 306 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 TDRD12Q587J7 1177 aaKnown RBP6.82□□□□□ -1.32
MACF1-232ENST00000567887 AFAP1L1Q8TED9 768 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 TMC6Q7Z403 805 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 ADCY5O95622 1261 aa6.82□□□□□ -1.32
MACF1-232ENST00000567887 NOB1Q9ULX3 412 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms