RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 WWC1Q8IX03 1113 aa24.3■■□□□ 1.48
PKD1-223ENST00000561668 CNBD1Q8NA66 436 aa24.3■■□□□ 1.48
PKD1-223ENST00000561668 ERVV-1B6SEH8 477 aa24.29■■□□□ 1.48
PKD1-223ENST00000561668 GNAI1P63096 354 aa24.29■■□□□ 1.48
PKD1-223ENST00000561668 ARHGAP27Q6ZUM4 889 aa24.29■■□□□ 1.48
PKD1-223ENST00000561668 NBPF5PQ86XG9 351 aaPredicted RBP24.29■■□□□ 1.48
PKD1-223ENST00000561668 BRIP1Q9BX63 1249 aa24.29■■□□□ 1.48
PKD1-223ENST00000561668 IFT57Q9NWB7 429 aa24.29■■□□□ 1.48
PKD1-223ENST00000561668 PDZRN3Q9UPQ7 1066 aa24.29■■□□□ 1.48
PKD1-223ENST00000561668 NIP7Q9Y221 180 aaKnown RBP eCLIP24.29■■□□□ 1.48
PKD1-223ENST00000561668 SCN7AQ01118 1682 aa24.28■■□□□ 1.48
PKD1-223ENST00000561668 TPTE2Q6XPS3 522 aa24.28■■□□□ 1.48
PKD1-223ENST00000561668 C2CD5Q86YS7 1000 aa24.28■■□□□ 1.48
PKD1-223ENST00000561668 AFDNP55196 1824 aaKnown RBP24.28■■□□□ 1.48
PKD1-223ENST00000561668 PRR5LQ6MZQ0 368 aa24.27■■□□□ 1.48
PKD1-223ENST00000561668 NECTIN2Q92692 538 aa24.27■■□□□ 1.48
PKD1-223ENST00000561668 IL16Q14005 1332 aa24.27■■□□□ 1.48
PKD1-223ENST00000561668 UTRNP46939 3433 aa24.26■■□□□ 1.47
PKD1-223ENST00000561668 GTF2E1P29083 439 aaPredicted RBP24.26■■□□□ 1.47
PKD1-223ENST00000561668 HLFQ16534 295 aa24.26■■□□□ 1.47
PKD1-223ENST00000561668 ZNF784Q8NCA9 323 aaPredicted RBP24.26■■□□□ 1.47
PKD1-223ENST00000561668 MAP3K15Q6ZN16 1313 aa24.26■■□□□ 1.47
PKD1-223ENST00000561668 NRXN2Q9P2S2 1712 aa24.25■■□□□ 1.47
PKD1-223ENST00000561668 CCDC24Q8N4L8 307 aa24.25■■□□□ 1.47
PKD1-223ENST00000561668 MBIPQ9NS73 344 aa24.25■■□□□ 1.47
PKD1-223ENST00000561668 KIAA1551Q9HCM1 1747 aa24.24■■□□□ 1.47
PKD1-223ENST00000561668 HOXB7P09629 217 aa24.24■■□□□ 1.47
PKD1-223ENST00000561668 TTLL7Q6ZT98 887 aa24.24■■□□□ 1.47
PKD1-223ENST00000561668 WDR63Q8IWG1 891 aa24.24■■□□□ 1.47
PKD1-223ENST00000561668 ZBTB3Q9H5J0 574 aa24.24■■□□□ 1.47
PKD1-223ENST00000561668 GOLGB1Q14789 3259 aaKnown RBP24.24■■□□□ 1.47
PKD1-223ENST00000561668 BCORQ6W2J9 1755 aa24.24■■□□□ 1.47
PKD1-223ENST00000561668 FAM177BA6PVY3 158 aa24.23■■□□□ 1.47
PKD1-223ENST00000561668 KRT24Q2M2I5 525 aa24.23■■□□□ 1.47
PKD1-223ENST00000561668 TTLL6Q8N841 843 aa24.23■■□□□ 1.47
PKD1-223ENST00000561668 ZNF622Q969S3 477 aaKnown RBP eCLIP24.23■■□□□ 1.47
PKD1-223ENST00000561668 ZNF521Q96K83 1311 aa24.22■■□□□ 1.47
PKD1-223ENST00000561668 PDIA6Q15084 440 aa24.22■■□□□ 1.47
PKD1-223ENST00000561668 HDGFL1Q5TGJ6 251 aa24.22■■□□□ 1.47
PKD1-223ENST00000561668 DUSP27Q5VZP5 1158 aa24.22■■□□□ 1.47
PKD1-223ENST00000561668 CHMP4AQ9BY43 222 aa24.22■■□□□ 1.47
PKD1-223ENST00000561668 NYXQ9GZU5 481 aa24.22■■□□□ 1.47
PKD1-223ENST00000561668 DDX21Q9NR30 783 aaKnown RBP eCLIP24.22■■□□□ 1.47
PKD1-223ENST00000561668 AIMP1Q12904 312 aaKnown RBP24.21■■□□□ 1.47
PKD1-223ENST00000561668 SENP3-EIF4A1A0A087X0R7 540 aa24.2■■□□□ 1.46
PKD1-223ENST00000561668 ANXA1P04083 346 aa24.2■■□□□ 1.46
PKD1-223ENST00000561668 COPS6Q7L5N1 327 aa24.2■■□□□ 1.46
PKD1-223ENST00000561668 DBF4Q9UBU7 674 aaPredicted RBP24.2■■□□□ 1.46
PKD1-223ENST00000561668 GIGYF2Q6Y7W6 1299 aaKnown RBP24.19■■□□□ 1.46
PKD1-223ENST00000561668 GPTP24298 496 aa24.18■■□□□ 1.46
PKD1-223ENST00000561668 PROSER3Q2NL68 480 aa24.18■■□□□ 1.46
PKD1-223ENST00000561668 CHPF2Q9P2E5 772 aa24.18■■□□□ 1.46
PKD1-223ENST00000561668 ELL2O00472 640 aaPredicted RBP24.17■■□□□ 1.46
PKD1-223ENST00000561668 XAGE3Q8WTP9 111 aa24.17■■□□□ 1.46
PKD1-223ENST00000561668 CNKSR1Q969H4 720 aa24.17■■□□□ 1.46
PKD1-223ENST00000561668 BRCA1P38398 1863 aaKnown RBP24.17■■□□□ 1.46
PKD1-223ENST00000561668 HSP90AB3PQ58FF7 597 aa24.16■■□□□ 1.46
PKD1-223ENST00000561668 LRP10Q7Z4F1 713 aa24.16■■□□□ 1.46
PKD1-223ENST00000561668 PPP1R42Q7Z4L9 355 aa24.16■■□□□ 1.46
PKD1-223ENST00000561668 MASTLQ96GX5 879 aa24.16■■□□□ 1.46
PKD1-223ENST00000561668 HYPKQ9NX55 129 aa24.16■■□□□ 1.46
PKD1-223ENST00000561668 SALL2Q9Y467 1007 aaPredicted RBP24.16■■□□□ 1.46
PKD1-223ENST00000561668 STYK1Q6J9G0 422 aa24.15■■□□□ 1.46
PKD1-223ENST00000561668 ZNF34Q8IZ26 560 aa24.15■■□□□ 1.46
PKD1-223ENST00000561668 SRGNP10124 158 aa24.14■■□□□ 1.45
PKD1-223ENST00000561668 PARP10Q53GL7 1025 aa24.14■■□□□ 1.45
PKD1-223ENST00000561668 NUP98P52948 1817 aa24.14■■□□□ 1.45
PKD1-223ENST00000561668 ARFGEF1Q9Y6D6 1849 aa24.14■■□□□ 1.45
PKD1-223ENST00000561668 ATP10DQ9P241 1426 aa24.13■■□□□ 1.45
PKD1-223ENST00000561668 NPR1P16066 1061 aa24.12■■□□□ 1.45
PKD1-223ENST00000561668 ANKRD13DQ6ZTN6 518 aa24.12■■□□□ 1.45
PKD1-223ENST00000561668 C8orf58Q8NAV2 365 aa24.12■■□□□ 1.45
PKD1-223ENST00000561668 CCDC30Q5VVM6 783 aa24.11■■□□□ 1.45
PKD1-223ENST00000561668 SUSD4Q5VX71 490 aa24.11■■□□□ 1.45
PKD1-223ENST00000561668 NUTM1Q86Y26 1132 aa24.11■■□□□ 1.45
PKD1-223ENST00000561668 GPBP1L1Q9HC44 474 aaPredicted RBP24.11■■□□□ 1.45
PKD1-223ENST00000561668 ZNF219Q9P2Y4 722 aaPredicted RBP24.11■■□□□ 1.45
PKD1-223ENST00000561668 ANKRD31Q8N7Z5 1873 aa24.11■■□□□ 1.45
PKD1-223ENST00000561668 ALDH1B1P30837 517 aa24.1■■□□□ 1.45
PKD1-223ENST00000561668 ERFEQ4G0M1 354 aa24.1■■□□□ 1.45
PKD1-223ENST00000561668 C9orf131Q5VYM1 1079 aa24.1■■□□□ 1.45
PKD1-223ENST00000561668 PLBD2Q8NHP8 589 aa24.1■■□□□ 1.45
PKD1-223ENST00000561668 TSR2Q969E8 191 aaKnown RBP24.1■■□□□ 1.45
PKD1-223ENST00000561668 UTP14AQ9BVJ6 771 aaKnown RBP24.1■■□□□ 1.45
PKD1-223ENST00000561668 SPINK5Q9NQ38 1064 aaPredicted RBP24.1■■□□□ 1.45
PKD1-223ENST00000561668 DLEC1Q9Y238 1755 aa24.09■■□□□ 1.45
PKD1-223ENST00000561668 KLRG2A4D1S0 409 aaPredicted RBP24.09■■□□□ 1.45
PKD1-223ENST00000561668 C21orf2O43822 256 aa24.09■■□□□ 1.45
PKD1-223ENST00000561668 TCIRG1Q13488 830 aa24.09■■□□□ 1.45
PKD1-223ENST00000561668 ZNF526Q8TF50 670 aaPredicted RBP24.09■■□□□ 1.45
PKD1-223ENST00000561668 UBN2Q6ZU65 1347 aa24.09■■□□□ 1.45
PKD1-223ENST00000561668 SOGA3Q5TF21 947 aa24.08■■□□□ 1.45
PKD1-223ENST00000561668 FANCIQ9NVI1 1328 aa24.08■■□□□ 1.44
PKD1-223ENST00000561668 IBTKQ9P2D0 1353 aaPredicted RBP24.07■■□□□ 1.44
PKD1-223ENST00000561668 PRPF40BQ6NWY9 871 aaKnown RBP24.07■■□□□ 1.44
PKD1-223ENST00000561668 RPGRQ92834 1020 aaKnown RBP24.07■■□□□ 1.44
PKD1-223ENST00000561668 RNF181Q9P0P0 153 aa24.07■■□□□ 1.44
PKD1-223ENST00000561668 GOLGA2Q08379 1002 aa24.06■■□□□ 1.44
PKD1-223ENST00000561668 RIC3Q7Z5B4 369 aa24.06■■□□□ 1.44
PKD1-223ENST00000561668 STK31Q9BXU1 1019 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms