RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.97
USP8-218ENST00000561330 PCDHGC4Q9Y5F7 938 aa9.02□□□□□ -0.97
USP8-218ENST00000561330 GPR25O00155 361 aa9.01□□□□□ -0.97
USP8-218ENST00000561330 HIF1AQ16665 826 aa9.01□□□□□ -0.97
USP8-218ENST00000561330 B4GALNT3Q6L9W6 998 aa9.01□□□□□ -0.97
USP8-218ENST00000561330 QTRT2Q9H974 415 aaKnown RBP9.01□□□□□ -0.97
USP8-218ENST00000561330 PHF24Q9UPV7 400 aa9.01□□□□□ -0.97
USP8-218ENST00000561330 ATXN7O15265 892 aaPredicted RBP9□□□□□ -0.97
USP8-218ENST00000561330 GMPRP36959 345 aa9□□□□□ -0.97
USP8-218ENST00000561330 UBAP2LQ14157 1087 aaKnown RBP9□□□□□ -0.97
USP8-218ENST00000561330 LCE2AQ5TA79 106 aaPredicted RBP9□□□□□ -0.97
USP8-218ENST00000561330 LCE2CQ5TA81 110 aa9□□□□□ -0.97
USP8-218ENST00000561330 MYO19Q96H55 970 aa9□□□□□ -0.97
USP8-218ENST00000561330 SUSD3Q96L08 255 aa9□□□□□ -0.97
USP8-218ENST00000561330 CFHR5Q9BXR6 569 aa9□□□□□ -0.97
USP8-218ENST00000561330 NAA30Q147X3 362 aaPredicted RBP8.99□□□□□ -0.97
USP8-218ENST00000561330 SAMD5Q5TGI4 173 aa8.99□□□□□ -0.97
USP8-218ENST00000561330 CAPN12Q6ZSI9 719 aa8.99□□□□□ -0.97
USP8-218ENST00000561330 KLRG1Q96E93 195 aa8.99□□□□□ -0.97
USP8-218ENST00000561330 HSH2DQ96JZ2 352 aa8.99□□□□□ -0.97
USP8-218ENST00000561330 COL25A1Q9BXS0 654 aaPredicted RBP8.99□□□□□ -0.97
USP8-218ENST00000561330 DGKZQ13574 1117 aa8.98□□□□□ -0.97
USP8-218ENST00000561330 C16orf46Q6P387 395 aa8.98□□□□□ -0.97
USP8-218ENST00000561330 KLK14Q9P0G3 267 aa8.98□□□□□ -0.97
USP8-218ENST00000561330 ATXN7L1Q9ULK2 861 aaPredicted RBP8.98□□□□□ -0.97
USP8-218ENST00000561330 BNIP3LO60238 219 aa8.97□□□□□ -0.97
USP8-218ENST00000561330 C11orf91Q3C1V1 193 aa8.97□□□□□ -0.97
USP8-218ENST00000561330 COX20Q5RI15 118 aa8.97□□□□□ -0.97
USP8-218ENST00000561330 ZNF280CQ8ND82 737 aa8.97□□□□□ -0.97
USP8-218ENST00000561330 ABHD17AQ96GS6 310 aa8.97□□□□□ -0.97
USP8-218ENST00000561330 NDFIP2Q9NV92 336 aa8.97□□□□□ -0.97
USP8-218ENST00000561330 SEPT3Q9UH03 358 aa8.97□□□□□ -0.97
USP8-218ENST00000561330 DCDC2BA2VCK2 349 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 KHNYNO15037 678 aaKnown RBP8.96□□□□□ -0.98
USP8-218ENST00000561330 FAM157BP0CG42 384 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 SCNN1AP37088 669 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 GAS6Q14393 721 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 RNFT1Q5M7Z0 435 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 PHLDB3Q6NSJ2 640 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 CEP63Q96MT8 703 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 CNTNAP3BQ96NU0 1288 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 CNTNAP3Q9BZ76 1288 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 SAP130Q9H0E3 1048 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 LRFN2Q9ULH4 789 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 MTMR7Q9Y216 660 aa8.96□□□□□ -0.98
USP8-218ENST00000561330 TGFBR3LH3BV60 316 aa8.95□□□□□ -0.98
USP8-218ENST00000561330 MAPTP10636 758 aaKnown RBP8.95□□□□□ -0.98
USP8-218ENST00000561330 TNP2Q05952 138 aa8.95□□□□□ -0.98
USP8-218ENST00000561330 IER5Q5VY09 327 aa8.95□□□□□ -0.98
USP8-218ENST00000561330 IFT43Q96FT9 208 aa8.95□□□□□ -0.98
USP8-218ENST00000561330 MX2P20592 715 aa8.94□□□□□ -0.98
USP8-218ENST00000561330 FGFR3P22607 806 aa8.94□□□□□ -0.98
USP8-218ENST00000561330 KRT76Q01546 638 aa8.94□□□□□ -0.98
USP8-218ENST00000561330 BTLAQ7Z6A9 289 aa8.94□□□□□ -0.98
USP8-218ENST00000561330 MBIPQ9NS73 344 aa8.94□□□□□ -0.98
USP8-218ENST00000561330 BCS1LQ9Y276 419 aa8.94□□□□□ -0.98
USP8-218ENST00000561330 EFSO43281 561 aa8.93□□□□□ -0.98
USP8-218ENST00000561330 WIPF1O43516 503 aa8.93□□□□□ -0.98
USP8-218ENST00000561330 LAMC2Q13753 1193 aa8.93□□□□□ -0.98
USP8-218ENST00000561330 NSFL1CQ9UNZ2 370 aaKnown RBP8.93□□□□□ -0.98
USP8-218ENST00000561330 BRD2P25440 801 aaKnown RBP8.92□□□□□ -0.98
USP8-218ENST00000561330 ARID4AP29374 1257 aaPredicted RBP8.92□□□□□ -0.98
USP8-218ENST00000561330 TYRO3Q06418 890 aa8.92□□□□□ -0.98
USP8-218ENST00000561330 BRD7Q9NPI1 651 aa8.92□□□□□ -0.98
USP8-218ENST00000561330 TNFRSF10BO14763 440 aa8.91□□□□□ -0.98
USP8-218ENST00000561330 MICAL2O94851 1124 aa8.91□□□□□ -0.98
USP8-218ENST00000561330 BMP4P12644 408 aa8.91□□□□□ -0.98
USP8-218ENST00000561330 CTBSQ01459 385 aa8.91□□□□□ -0.98
USP8-218ENST00000561330 GTF3C2Q8WUA4 911 aaPredicted RBP8.91□□□□□ -0.98
USP8-218ENST00000561330 MARK1Q9P0L2 795 aa8.91□□□□□ -0.98
USP8-218ENST00000561330 STIM2Q9P246 746 aa8.91□□□□□ -0.98
USP8-218ENST00000561330 DMGDHQ9UI17 866 aaKnown RBP8.91□□□□□ -0.98
USP8-218ENST00000561330 CD33P20138 364 aa8.9□□□□□ -0.98
USP8-218ENST00000561330 MAP2K3P46734 347 aa8.9□□□□□ -0.98
USP8-218ENST00000561330 IDH3AP50213 366 aa8.9□□□□□ -0.98
USP8-218ENST00000561330 SRSF11Q05519 484 aaKnown RBP8.9□□□□□ -0.98
USP8-218ENST00000561330 HELQQ8TDG4 1101 aa8.9□□□□□ -0.98
USP8-218ENST00000561330 STRN4Q9NRL3 753 aa8.9□□□□□ -0.98
USP8-218ENST00000561330 KCNH4Q9UQ05 1017 aa8.9□□□□□ -0.98
USP8-218ENST00000561330 IGF1RP08069 1367 aa8.89□□□□□ -0.99
USP8-218ENST00000561330 BRD1O95696 1058 aa8.89□□□□□ -0.99
USP8-218ENST00000561330 SFSWAPQ12872 951 aaKnown RBP8.89□□□□□ -0.99
USP8-218ENST00000561330 FAM182BQ5T319 152 aa8.89□□□□□ -0.99
USP8-218ENST00000561330 TREML1Q86YW5 311 aa8.89□□□□□ -0.99
USP8-218ENST00000561330 ETFBKMTQ8IXQ9 262 aa8.89□□□□□ -0.99
USP8-218ENST00000561330 TRAIPQ9BWF2 469 aa8.89□□□□□ -0.99
USP8-218ENST00000561330 HCN2Q9UL51 889 aa8.89□□□□□ -0.99
USP8-218ENST00000561330 ADAMTS2O95450 1211 aa8.88□□□□□ -0.99
USP8-218ENST00000561330 ABL1P00519 1130 aa8.88□□□□□ -0.99
USP8-218ENST00000561330 EPB42P16452 691 aa8.88□□□□□ -0.99
USP8-218ENST00000561330 INPP5BP32019 993 aa8.88□□□□□ -0.99
USP8-218ENST00000561330 ARSDP51689 593 aa8.88□□□□□ -0.99
USP8-218ENST00000561330 KCNQ4P56696 695 aa8.88□□□□□ -0.99
USP8-218ENST00000561330 ABTB2Q8N961 1025 aa8.88□□□□□ -0.99
USP8-218ENST00000561330 DNMT3AQ9Y6K1 912 aaPredicted RBP8.88□□□□□ -0.99
USP8-218ENST00000561330 C2CD2LO14523 706 aa8.87□□□□□ -0.99
USP8-218ENST00000561330 SLURP2P0DP57 97 aa8.87□□□□□ -0.99
USP8-218ENST00000561330 PDIA4P13667 645 aaKnown RBP8.87□□□□□ -0.99
USP8-218ENST00000561330 OPLAHO14841 1288 aa8.86□□□□□ -0.99
USP8-218ENST00000561330 INSM1Q01101 510 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms