RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PXDNLA1KZ92 1463 aa25.83■■□□□ 1.73
TSPAN3-210ENST00000561277 HLFQ16534 295 aa25.82■■□□□ 1.72
TSPAN3-210ENST00000561277 MIER1Q8N108 512 aa25.82■■□□□ 1.72
TSPAN3-210ENST00000561277 SETDB2Q96T68 719 aa25.82■■□□□ 1.72
TSPAN3-210ENST00000561277 NRXN2Q9P2S2 1712 aa25.82■■□□□ 1.72
TSPAN3-210ENST00000561277 CLEC4GQ6UXB4 293 aa25.82■■□□□ 1.72
TSPAN3-210ENST00000561277 ZBTB3Q9H5J0 574 aa25.82■■□□□ 1.72
TSPAN3-210ENST00000561277 CHPF2Q9P2E5 772 aa25.82■■□□□ 1.72
TSPAN3-210ENST00000561277 IL16Q14005 1332 aa25.82■■□□□ 1.72
TSPAN3-210ENST00000561277 KIAA1551Q9HCM1 1747 aa25.81■■□□□ 1.72
TSPAN3-210ENST00000561277 N4BP2Q86UW6 1770 aaPredicted RBP25.81■■□□□ 1.72
TSPAN3-210ENST00000561277 LRP10Q7Z4F1 713 aa25.81■■□□□ 1.72
TSPAN3-210ENST00000561277 C8orf58Q8NAV2 365 aa25.81■■□□□ 1.72
TSPAN3-210ENST00000561277 MAP3K15Q6ZN16 1313 aa25.81■■□□□ 1.72
TSPAN3-210ENST00000561277 A0A0G2JLW4 131 aa25.8■■□□□ 1.72
TSPAN3-210ENST00000561277 TGFB2P61812 414 aa25.8■■□□□ 1.72
TSPAN3-210ENST00000561277 DDX21Q9NR30 783 aaKnown RBP eCLIP25.8■■□□□ 1.72
TSPAN3-210ENST00000561277 WDR63Q8IWG1 891 aa25.79■■□□□ 1.72
TSPAN3-210ENST00000561277 NPHP1O15259 732 aa25.78■■□□□ 1.72
TSPAN3-210ENST00000561277 AIMP1Q12904 312 aaKnown RBP25.78■■□□□ 1.72
TSPAN3-210ENST00000561277 NIP7Q9Y221 180 aaKnown RBP eCLIP25.78■■□□□ 1.72
TSPAN3-210ENST00000561277 ERVV-1B6SEH8 477 aa25.78■■□□□ 1.72
TSPAN3-210ENST00000561277 DPEP1P16444 411 aa25.78■■□□□ 1.72
TSPAN3-210ENST00000561277 YBX3P16989 372 aaKnown RBP eCLIP25.78■■□□□ 1.725e-9■■■□□ 17.7
TSPAN3-210ENST00000561277 FANCIQ9NVI1 1328 aa25.77■■□□□ 1.72
TSPAN3-210ENST00000561277 CCDC24Q8N4L8 307 aa25.77■■□□□ 1.72
TSPAN3-210ENST00000561277 TSPYL6Q8N831 410 aa25.77■■□□□ 1.72
TSPAN3-210ENST00000561277 DBF4Q9UBU7 674 aaPredicted RBP25.77■■□□□ 1.72
TSPAN3-210ENST00000561277 RGL2O15211 777 aa25.76■■□□□ 1.71
TSPAN3-210ENST00000561277 COPS6Q7L5N1 327 aa25.76■■□□□ 1.71
TSPAN3-210ENST00000561277 CNBD1Q8NA66 436 aa25.76■■□□□ 1.71
TSPAN3-210ENST00000561277 XAGE3Q8WTP9 111 aa25.76■■□□□ 1.71
TSPAN3-210ENST00000561277 NUP98P52948 1817 aa25.76■■□□□ 1.71
TSPAN3-210ENST00000561277 PRR5LQ6MZQ0 368 aa25.75■■□□□ 1.71
TSPAN3-210ENST00000561277 FAM177BA6PVY3 158 aa25.74■■□□□ 1.71
TSPAN3-210ENST00000561277 CHRNA5P30532 468 aa25.74■■□□□ 1.71
TSPAN3-210ENST00000561277 NBPF5PQ86XG9 351 aaPredicted RBP25.74■■□□□ 1.71
TSPAN3-210ENST00000561277 SPINK5Q9NQ38 1064 aaPredicted RBP25.73■■□□□ 1.71
TSPAN3-210ENST00000561277 ATP10DQ9P241 1426 aa25.73■■□□□ 1.71
TSPAN3-210ENST00000561277 GPTP24298 496 aa25.73■■□□□ 1.71
TSPAN3-210ENST00000561277 TWISTNBQ3B726 338 aaPredicted RBP25.72■■□□□ 1.71
TSPAN3-210ENST00000561277 GIGYF2Q6Y7W6 1299 aaKnown RBP25.72■■□□□ 1.71
TSPAN3-210ENST00000561277 ST5P78524 1137 aa25.71■■□□□ 1.71
TSPAN3-210ENST00000561277 HYPKQ9NX55 129 aa25.71■■□□□ 1.71
TSPAN3-210ENST00000561277 BCS1LQ9Y276 419 aa25.71■■□□□ 1.71
TSPAN3-210ENST00000561277 ANKRD31Q8N7Z5 1873 aa25.71■■□□□ 1.71
TSPAN3-210ENST00000561277 KCNA3P22001 575 aa25.7■■□□□ 1.71
TSPAN3-210ENST00000561277 ZNF521Q96K83 1311 aa25.7■■□□□ 1.7
TSPAN3-210ENST00000561277 BRCA1P38398 1863 aaKnown RBP25.7■■□□□ 1.7
TSPAN3-210ENST00000561277 GOLGA2Q08379 1002 aa25.69■■□□□ 1.7
TSPAN3-210ENST00000561277 CCDC30Q5VVM6 783 aa25.69■■□□□ 1.7
TSPAN3-210ENST00000561277 MYH16Q9H6N6 1097 aa25.69■■□□□ 1.7
TSPAN3-210ENST00000561277 UBN2Q6ZU65 1347 aa25.69■■□□□ 1.7
TSPAN3-210ENST00000561277 GRIN3BO60391 1043 aa25.69■■□□□ 1.7
TSPAN3-210ENST00000561277 BRIP1Q9BX63 1249 aa25.69■■□□□ 1.7
TSPAN3-210ENST00000561277 TCERG1O14776 1098 aaKnown RBP25.68■■□□□ 1.7
TSPAN3-210ENST00000561277 TPTE2Q6XPS3 522 aa25.68■■□□□ 1.7
TSPAN3-210ENST00000561277 C2CD5Q86YS7 1000 aa25.68■■□□□ 1.7
TSPAN3-210ENST00000561277 PIM2Q9P1W9 311 aa25.68■■□□□ 1.7
TSPAN3-210ENST00000561277 GTF2E1P29083 439 aaPredicted RBP25.67■■□□□ 1.7
TSPAN3-210ENST00000561277 EXOSC9Q06265 439 aaKnown RBP25.67■■□□□ 1.7
TSPAN3-210ENST00000561277 CHMP4AQ9BY43 222 aa25.67■■□□□ 1.7
TSPAN3-210ENST00000561277 PHAXQ9H814 394 aaKnown RBP25.67■■□□□ 1.7
TSPAN3-210ENST00000561277 PDE6BP35913 854 aa25.66■■□□□ 1.7
TSPAN3-210ENST00000561277 ZNF34Q8IZ26 560 aa25.66■■□□□ 1.7
TSPAN3-210ENST00000561277 H0YIN7 160 aa25.65■■□□□ 1.7
TSPAN3-210ENST00000561277 COL11A2P13942 1736 aaPredicted RBP25.65■■□□□ 1.7
TSPAN3-210ENST00000561277 ANKRD36CQ5JPF3 1778 aa25.65■■□□□ 1.7
TSPAN3-210ENST00000561277 DLEC1Q9Y238 1755 aa25.65■■□□□ 1.7
TSPAN3-210ENST00000561277 SUSD4Q5VX71 490 aa25.65■■□□□ 1.7
TSPAN3-210ENST00000561277 ANKRD13DQ6ZTN6 518 aa25.65■■□□□ 1.7
TSPAN3-210ENST00000561277 NUTM1Q86Y26 1132 aa25.65■■□□□ 1.7
TSPAN3-210ENST00000561277 PLBD2Q8NHP8 589 aa25.65■■□□□ 1.7
TSPAN3-210ENST00000561277 STK31Q9BXU1 1019 aa25.65■■□□□ 1.7
TSPAN3-210ENST00000561277 NYXQ9GZU5 481 aa25.65■■□□□ 1.7
TSPAN3-210ENST00000561277 HSP90AB3PQ58FF7 597 aa25.64■■□□□ 1.69
TSPAN3-210ENST00000561277 DALRD3Q5D0E6 543 aaKnown RBP25.64■■□□□ 1.69
TSPAN3-210ENST00000561277 YY1P25490 414 aa25.63■■□□□ 1.69
TSPAN3-210ENST00000561277 PARP10Q53GL7 1025 aa25.63■■□□□ 1.69
TSPAN3-210ENST00000561277 ZNF622Q969S3 477 aaKnown RBP eCLIP25.62■■□□□ 1.69
TSPAN3-210ENST00000561277 ABCC12Q96J65 1359 aa25.62■■□□□ 1.69
TSPAN3-210ENST00000561277 ARFGEF2Q9Y6D5 1785 aa25.61■■□□□ 1.69
TSPAN3-210ENST00000561277 TCIRG1Q13488 830 aa25.61■■□□□ 1.69
TSPAN3-210ENST00000561277 CHD4Q14839 1912 aa25.61■■□□□ 1.69
TSPAN3-210ENST00000561277 VAMP4O75379 141 aa25.61■■□□□ 1.69
TSPAN3-210ENST00000561277 NTSR2O95665 410 aa25.61■■□□□ 1.69
TSPAN3-210ENST00000561277 ERFEQ4G0M1 354 aa25.61■■□□□ 1.69
TSPAN3-210ENST00000561277 PPP1R42Q7Z4L9 355 aa25.61■■□□□ 1.69
TSPAN3-210ENST00000561277 RIC3Q7Z5B4 369 aa25.61■■□□□ 1.69
TSPAN3-210ENST00000561277 ZNF428Q96B54 188 aa25.61■■□□□ 1.69
TSPAN3-210ENST00000561277 IBTKQ9P2D0 1353 aaPredicted RBP25.6■■□□□ 1.69
TSPAN3-210ENST00000561277 TNRC6CQ9HCJ0 1690 aaKnown RBP25.6■■□□□ 1.69
TSPAN3-210ENST00000561277 ARFGEF1Q9Y6D6 1849 aa25.59■■□□□ 1.69
TSPAN3-210ENST00000561277 E9PSI1 815 aa25.59■■□□□ 1.69
TSPAN3-210ENST00000561277 NLRP10Q86W26 655 aa25.59■■□□□ 1.69
TSPAN3-210ENST00000561277 PDZRN3Q9UPQ7 1066 aa25.59■■□□□ 1.69
TSPAN3-210ENST00000561277 SLC4A2P04920 1241 aa25.58■■□□□ 1.69
TSPAN3-210ENST00000561277 TTLL6Q8N841 843 aa25.58■■□□□ 1.69
TSPAN3-210ENST00000561277 UTP14AQ9BVJ6 771 aaKnown RBP25.58■■□□□ 1.69
TSPAN3-210ENST00000561277 ATP5J2-PTCD1G3V325 749 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms