RNA–Protein interactions for RNA: ENST00000560542.1

IRF9-210, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-210ENST00000560542 TAF1DQ9H5J8 278 aaPredicted RBP19.25■□□□□ 0.67
IRF9-210ENST00000560542 TBC1D2BQ9UPU7 963 aa19.25■□□□□ 0.67
IRF9-210ENST00000560542 DIAPH1O60610 1272 aaKnown RBP19.24■□□□□ 0.67
IRF9-210ENST00000560542 CAMTA2O94983 1202 aa19.24■□□□□ 0.67
IRF9-210ENST00000560542 SIPA1L3O60292 1781 aaPredicted RBP19.24■□□□□ 0.67
IRF9-210ENST00000560542 BCORQ6W2J9 1755 aa19.24■□□□□ 0.67
IRF9-210ENST00000560542 TRIM26Q12899 539 aaPredicted RBP19.23■□□□□ 0.67
IRF9-210ENST00000560542 CCDC93Q567U6 631 aa19.23■□□□□ 0.67
IRF9-210ENST00000560542 GAS2L2Q8NHY3 880 aa19.23■□□□□ 0.67
IRF9-210ENST00000560542 FMNL2Q96PY5 1086 aa19.23■□□□□ 0.67
IRF9-210ENST00000560542 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
IRF9-210ENST00000560542 GNAT3A8MTJ3 354 aa19.22■□□□□ 0.67
IRF9-210ENST00000560542 ITGBL1O95965 494 aaPredicted RBP19.22■□□□□ 0.67
IRF9-210ENST00000560542 VEGFBP49765 207 aa19.22■□□□□ 0.67
IRF9-210ENST00000560542 CCDC24Q8N4L8 307 aa19.22■□□□□ 0.67
IRF9-210ENST00000560542 C7orf43Q8WVR3 580 aa19.22■□□□□ 0.67
IRF9-210ENST00000560542 WBP1LQ9NX94 342 aa19.22■□□□□ 0.67
IRF9-210ENST00000560542 ADAMTSL1Q8N6G6 1762 aa19.21■□□□□ 0.67
IRF9-210ENST00000560542 RGL2O15211 777 aa19.21■□□□□ 0.67
IRF9-210ENST00000560542 CACNA1SQ13698 1873 aa19.21■□□□□ 0.67
IRF9-210ENST00000560542 CLEC4GQ6UXB4 293 aa19.21■□□□□ 0.67
IRF9-210ENST00000560542 RASSF10A6NK89 507 aa19.2■□□□□ 0.66
IRF9-210ENST00000560542 FKBP4Q02790 459 aaKnown RBP eCLIP19.2■□□□□ 0.66
IRF9-210ENST00000560542 PNMA8AQ86V59 439 aaPredicted RBP19.2■□□□□ 0.66
IRF9-210ENST00000560542 DZIP3Q86Y13 1208 aaKnown RBP19.2■□□□□ 0.66
IRF9-210ENST00000560542 HACL1Q9UJ83 578 aa19.2■□□□□ 0.66
IRF9-210ENST00000560542 ZNF652Q9Y2D9 606 aa19.2■□□□□ 0.66
IRF9-210ENST00000560542 CEMIPQ8WUJ3 1361 aa19.19■□□□□ 0.66
IRF9-210ENST00000560542 KLRG2A4D1S0 409 aaPredicted RBP19.19■□□□□ 0.66
IRF9-210ENST00000560542 NPR1P16066 1061 aa19.19■□□□□ 0.66
IRF9-210ENST00000560542 RTKN2Q8IZC4 609 aa19.19■□□□□ 0.66
IRF9-210ENST00000560542 IL17REQ8NFR9 667 aa19.19■□□□□ 0.66
IRF9-210ENST00000560542 A1BGP04217 495 aa19.18■□□□□ 0.66
IRF9-210ENST00000560542 NBPF5PQ86XG9 351 aaPredicted RBP19.18■□□□□ 0.66
IRF9-210ENST00000560542 EPHX2P34913 555 aa19.17■□□□□ 0.66
IRF9-210ENST00000560542 MAP2K1Q02750 393 aaPredicted RBP19.17■□□□□ 0.66
IRF9-210ENST00000560542 EAPPQ56P03 285 aaPredicted RBP19.17■□□□□ 0.66
IRF9-210ENST00000560542 ZNF541Q9H0D2 1346 aa19.17■□□□□ 0.66
IRF9-210ENST00000560542 COL3A1P02461 1466 aaPredicted RBP19.16■□□□□ 0.66
IRF9-210ENST00000560542 SLC34A2O95436 690 aa19.16■□□□□ 0.66
IRF9-210ENST00000560542 LBX1P52954 281 aa19.16■□□□□ 0.66
IRF9-210ENST00000560542 FZD9O00144 591 aa19.15■□□□□ 0.66
IRF9-210ENST00000560542 DEFB115Q30KQ5 88 aa19.15■□□□□ 0.66
IRF9-210ENST00000560542 TPTE2Q6XPS3 522 aa19.15■□□□□ 0.66
IRF9-210ENST00000560542 CLEC11AQ9Y240 323 aa19.15■□□□□ 0.66
IRF9-210ENST00000560542 CNTROBQ8N137 903 aa19.14■□□□□ 0.65
IRF9-210ENST00000560542 GPC2Q8N158 579 aa19.14■□□□□ 0.65
IRF9-210ENST00000560542 ZNF277Q9NRM2 450 aaPredicted RBP19.14■□□□□ 0.65
IRF9-210ENST00000560542 BTBD11A6QL63 1104 aa19.13■□□□□ 0.65
IRF9-210ENST00000560542 HSPA8P11142 646 aaKnown RBP19.13■□□□□ 0.65
IRF9-210ENST00000560542 ALDH1B1P30837 517 aa19.13■□□□□ 0.65
IRF9-210ENST00000560542 THSD7BQ9C0I4 1608 aa19.13■□□□□ 0.65
IRF9-210ENST00000560542 NPC1L1Q9UHC9 1359 aa19.12■□□□□ 0.65
IRF9-210ENST00000560542 WDR33Q9C0J8 1336 aaKnown RBP19.12■□□□□ 0.65
IRF9-210ENST00000560542 PER1O15534 1290 aaPredicted RBP19.12■□□□□ 0.65
IRF9-210ENST00000560542 IARSP41252 1262 aaKnown RBP19.12■□□□□ 0.65
IRF9-210ENST00000560542 ABHD8Q96I13 439 aa19.12■□□□□ 0.65
IRF9-210ENST00000560542 PSMD1Q99460 953 aa19.12■□□□□ 0.65
IRF9-210ENST00000560542 RNF123Q5XPI4 1314 aa19.11■□□□□ 0.65
IRF9-210ENST00000560542 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
IRF9-210ENST00000560542 SNED1Q8TER0 1413 aa19.1■□□□□ 0.65
IRF9-210ENST00000560542 KIF7Q2M1P5 1343 aa19.1■□□□□ 0.65
IRF9-210ENST00000560542 SNRPA1P09661 255 aaKnown RBP19.1■□□□□ 0.65
IRF9-210ENST00000560542 CC2D2BQ6DHV5 1058 aa19.1■□□□□ 0.65
IRF9-210ENST00000560542 JDP2Q8WYK2 163 aa19.1■□□□□ 0.65
IRF9-210ENST00000560542 NIP7Q9Y221 180 aaKnown RBP eCLIP19.1■□□□□ 0.65
IRF9-210ENST00000560542 USP16Q9Y5T5 823 aa19.1■□□□□ 0.65
IRF9-210ENST00000560542 GRIPAP1Q4V328 841 aa19.09■□□□□ 0.65
IRF9-210ENST00000560542 MAP1SQ66K74 1059 aaPredicted RBP19.09■□□□□ 0.65
IRF9-210ENST00000560542 SYNE4Q8N205 404 aa19.09■□□□□ 0.65
IRF9-210ENST00000560542 ABT1Q9ULW3 272 aaKnown RBP19.09■□□□□ 0.65
IRF9-210ENST00000560542 KCNQ3O43525 872 aa19.08■□□□□ 0.64
IRF9-210ENST00000560542 ECE1P42892 770 aa19.08■□□□□ 0.64
IRF9-210ENST00000560542 CC2D1BQ5T0F9 858 aaKnown RBP19.08■□□□□ 0.64
IRF9-210ENST00000560542 DDX21Q9NR30 783 aaKnown RBP eCLIP19.08■□□□□ 0.64
IRF9-210ENST00000560542 LMOD1P29536 600 aaPredicted RBP19.07■□□□□ 0.64
IRF9-210ENST00000560542 EIF6P56537 245 aaKnown RBP19.07■□□□□ 0.64
IRF9-210ENST00000560542 CRY2Q49AN0 593 aa19.07■□□□□ 0.64
IRF9-210ENST00000560542 BEGAINQ9BUH8 593 aa19.07■□□□□ 0.64
IRF9-210ENST00000560542 FAM161AQ3B820 660 aa19.06■□□□□ 0.64
IRF9-210ENST00000560542 OLFM4Q6UX06 510 aa19.06■□□□□ 0.64
IRF9-210ENST00000560542 PIP4K2AP48426 406 aaPredicted RBP19.05■□□□□ 0.64
IRF9-210ENST00000560542 NYXQ9GZU5 481 aa19.05■□□□□ 0.64
IRF9-210ENST00000560542 RIC1Q4ADV7 1423 aa19.05■□□□□ 0.64
IRF9-210ENST00000560542 GTF2E1P29083 439 aaPredicted RBP19.04■□□□□ 0.64
IRF9-210ENST00000560542 PRKAR2BP31323 418 aa19.04■□□□□ 0.64
IRF9-210ENST00000560542 CAPNS2Q96L46 248 aa19.04■□□□□ 0.64
IRF9-210ENST00000560542 RSPH6AQ9H0K4 717 aa19.04■□□□□ 0.64
IRF9-210ENST00000560542 IBTKQ9P2D0 1353 aaPredicted RBP19.04■□□□□ 0.64
IRF9-210ENST00000560542 NBPF26B4DH59 902 aa19.03■□□□□ 0.64
IRF9-210ENST00000560542 RGS19P49795 217 aa19.03■□□□□ 0.64
IRF9-210ENST00000560542 NBPF10Q6P3W6 841 aaKnown RBP19.03■□□□□ 0.64
IRF9-210ENST00000560542 USP50Q70EL3 339 aaPredicted RBP19.03■□□□□ 0.64
IRF9-210ENST00000560542 NBPF15Q8N660 670 aa19.03■□□□□ 0.64
IRF9-210ENST00000560542 RTF1Q92541 710 aaKnown RBP19.03■□□□□ 0.64
IRF9-210ENST00000560542 PHACTR3Q96KR7 559 aa19.03■□□□□ 0.64
IRF9-210ENST00000560542 PRAMEF22A3QJZ6 481 aa19.02■□□□□ 0.64
IRF9-210ENST00000560542 SCNN1DP51172 638 aa19.02■□□□□ 0.64
IRF9-210ENST00000560542 MLLT1Q03111 559 aaPredicted RBP19.02■□□□□ 0.64
IRF9-210ENST00000560542 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms