RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 FAM50AQ14320 339 aaKnown RBP5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 GRIN2CQ14957 1233 aa5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 CCER1Q8TC90 406 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 CNKSR1Q969H4 720 aa5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 C8orf37Q96NL8 207 aa5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 ESYT1Q9BSJ8 1104 aa5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 METTL14Q9HCE5 456 aaKnown RBP5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 USTQ9Y2C2 406 aa5.91□□□□□ -1.46
HMGB3P26-201ENST00000560051 KRBA1A5PL33 1030 aa5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 EIF3JO75822 258 aaKnown RBP5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 ITGB2P05107 769 aa5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 CENPCQ03188 943 aa5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 LONRF3Q496Y0 759 aa5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 ESCO1Q5FWF5 840 aa5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 WDR78Q5VTH9 848 aa5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 TSHZ1Q6ZSZ6 1077 aa5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 FAM43BQ6ZT52 329 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 TXNDC2Q86VQ3 553 aa5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 PPARGC1BQ86YN6 1023 aaKnown RBP5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 RAB6BQ9NRW1 208 aa5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 ATXN7L1Q9ULK2 861 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P26-201ENST00000560051 FURINP09958 794 aa5.89□□□□□ -1.47
HMGB3P26-201ENST00000560051 SCTRP47872 440 aa5.89□□□□□ -1.47
HMGB3P26-201ENST00000560051 CNGB1Q14028 1251 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P26-201ENST00000560051 CEP120Q8N960 986 aa5.89□□□□□ -1.47
HMGB3P26-201ENST00000560051 OSBPL3Q9H4L5 887 aa5.89□□□□□ -1.47
HMGB3P26-201ENST00000560051 JADE2Q9NQC1 790 aa5.89□□□□□ -1.47
HMGB3P26-201ENST00000560051 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.89□□□□□ -1.47
HMGB3P26-201ENST00000560051 NOP53Q9NZM5 478 aaKnown RBP5.89□□□□□ -1.47
HMGB3P26-201ENST00000560051 TTC36A6NLP5 189 aa5.88□□□□□ -1.47
HMGB3P26-201ENST00000560051 SHISA8B8ZZ34 492 aa5.88□□□□□ -1.47
HMGB3P26-201ENST00000560051 GNB5O14775 395 aa5.88□□□□□ -1.47
HMGB3P26-201ENST00000560051 MYBPC2Q14324 1141 aa5.88□□□□□ -1.47
HMGB3P26-201ENST00000560051 SMC5Q8IY18 1101 aa5.88□□□□□ -1.47
HMGB3P26-201ENST00000560051 UBXN4Q92575 508 aa5.88□□□□□ -1.47
HMGB3P26-201ENST00000560051 ARID4AP29374 1257 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P26-201ENST00000560051 FIGNL1Q6PIW4 674 aa5.87□□□□□ -1.47
HMGB3P26-201ENST00000560051 Q8N3U1 123 aa5.87□□□□□ -1.47
HMGB3P26-201ENST00000560051 PBXIP1Q96AQ6 731 aa5.87□□□□□ -1.47
HMGB3P26-201ENST00000560051 RUBCNLQ9H714 662 aa5.87□□□□□ -1.47
HMGB3P26-201ENST00000560051 SUGT1Q9Y2Z0 365 aa5.87□□□□□ -1.47
HMGB3P26-201ENST00000560051 ZRANB2O95218 330 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 FGFR3P22607 806 aa5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 SF3A1Q15459 793 aaKnown RBP5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 SLCO4C1Q6ZQN7 724 aa5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 ZNF662Q6ZS27 426 aa5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 NBPF11Q86T75 865 aa5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 NME8Q8N427 588 aa5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 MICAL1Q8TDZ2 1067 aa5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 XAGE2Q96GT9 111 aa5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 CALR3Q96L12 384 aaKnown RBP5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 GGA1Q9UJY5 639 aa5.86□□□□□ -1.47
HMGB3P26-201ENST00000560051 EXOC5O00471 708 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 IL2RAP01589 272 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 COL8A1P27658 744 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 MSX1P28360 303 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 MMP14P50281 582 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 SETDB1Q15047 1291 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 GIMAP6Q6P9H5 292 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 RINLQ6ZS11 566 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 C1orf229Q6ZS94 237 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 APBB1IPQ7Z5R6 666 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 RHBDD1Q8TEB9 315 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 ABHD17AQ96GS6 310 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 SGSM3Q96HU1 749 aa5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 GJD4Q96KN9 370 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 PPP1R1BQ9UD71 204 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P26-201ENST00000560051 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 ZNF16P17020 682 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 SRPK2P78362 688 aaKnown RBP5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 USP4Q13107 963 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 NBPF1Q3BBV0 1214 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 C4orf17Q53FE4 359 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 KRBA2Q6ZNG9 492 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 TBC1D9Q6ZT07 1266 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 SDR16C5Q8N3Y7 309 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 BTBD6Q96KE9 485 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 MTA3Q9BTC8 594 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 PCGF6Q9BYE7 350 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 SLC52A1Q9NWF4 448 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 NUB1Q9Y5A7 615 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 NDUFB9Q9Y6M9 179 aa5.84□□□□□ -1.47
HMGB3P26-201ENST00000560051 C1QTNF9BB2RNN3 333 aa5.83□□□□□ -1.48
HMGB3P26-201ENST00000560051 HSP90AA1P07900 732 aaKnown RBP5.83□□□□□ -1.48
HMGB3P26-201ENST00000560051 ARAFP10398 606 aa5.83□□□□□ -1.48
HMGB3P26-201ENST00000560051 LINC00114Q6XXX2 140 aa5.83□□□□□ -1.48
HMGB3P26-201ENST00000560051 SUV39H2Q9H5I1 410 aa5.83□□□□□ -1.48
HMGB3P26-201ENST00000560051 VRTNQ9H8Y1 702 aa5.83□□□□□ -1.48
HMGB3P26-201ENST00000560051 SNRKQ9NRH2 765 aa5.83□□□□□ -1.48
HMGB3P26-201ENST00000560051 PCDHGC4Q9Y5F7 938 aa5.83□□□□□ -1.48
HMGB3P26-201ENST00000560051 POM121CA8CG34 1229 aa5.82□□□□□ -1.48
HMGB3P26-201ENST00000560051 NEURL1BA8MQ27 555 aa5.82□□□□□ -1.48
HMGB3P26-201ENST00000560051 BNIP3LO60238 219 aa5.82□□□□□ -1.48
HMGB3P26-201ENST00000560051 EPXP11678 715 aa5.82□□□□□ -1.48
HMGB3P26-201ENST00000560051 RFX1P22670 979 aa5.82□□□□□ -1.48
HMGB3P26-201ENST00000560051 ANP32AP39687 249 aaKnown RBP5.82□□□□□ -1.48
HMGB3P26-201ENST00000560051 CTBSQ01459 385 aa5.82□□□□□ -1.48
HMGB3P26-201ENST00000560051 TLR1Q15399 786 aa5.82□□□□□ -1.48
HMGB3P26-201ENST00000560051 DNAJC14Q6Y2X3 702 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P26-201ENST00000560051 RNF135Q8IUD6 432 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms