RNA–Protein interactions for RNA: ENST00000558832.5

ZEB1-213, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 570 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-213ENST00000558832 GTF3C2Q8WUA4 911 aaPredicted RBP9.39□□□□□ -0.91
ZEB1-213ENST00000558832 CHMP7Q8WUX9 453 aaPredicted RBP9.39□□□□□ -0.91
ZEB1-213ENST00000558832 C2orf49Q9BVC5 232 aaPredicted RBP9.39□□□□□ -0.91
ZEB1-213ENST00000558832 PARP3Q9Y6F1 533 aa9.39□□□□□ -0.91
ZEB1-213ENST00000558832 LOC105371045A0A1W2PR82 267 aa9.38□□□□□ -0.91
ZEB1-213ENST00000558832 EML1O00423 815 aa9.38□□□□□ -0.91
ZEB1-213ENST00000558832 ABL1P00519 1130 aa9.38□□□□□ -0.91
ZEB1-213ENST00000558832 PHKA2P46019 1235 aa9.38□□□□□ -0.91
ZEB1-213ENST00000558832 PSMA6P60900 246 aaKnown RBP9.38□□□□□ -0.91
ZEB1-213ENST00000558832 TEAD4Q15561 434 aa9.38□□□□□ -0.91
ZEB1-213ENST00000558832 NIFKQ9BYG3 293 aaKnown RBP9.38□□□□□ -0.91
ZEB1-213ENST00000558832 SENP2Q9HC62 589 aa9.38□□□□□ -0.91
ZEB1-213ENST00000558832 CABP1Q9NZU7 370 aa9.38□□□□□ -0.91
ZEB1-213ENST00000558832 SYNJ2O15056 1496 aa9.38□□□□□ -0.91
ZEB1-213ENST00000558832 EEA1Q15075 1411 aa9.38□□□□□ -0.91
ZEB1-213ENST00000558832 GRIN2BQ13224 1484 aa9.37□□□□□ -0.91
ZEB1-213ENST00000558832 NOS2P35228 1153 aa9.37□□□□□ -0.91
ZEB1-213ENST00000558832 GNASQ5JWF2 1037 aa9.37□□□□□ -0.91
ZEB1-213ENST00000558832 VTI1AQ96AJ9 217 aa9.37□□□□□ -0.91
ZEB1-213ENST00000558832 DNMT3AQ9Y6K1 912 aaPredicted RBP9.37□□□□□ -0.91
ZEB1-213ENST00000558832 FGD5Q6ZNL6 1462 aa9.36□□□□□ -0.91
ZEB1-213ENST00000558832 SENP3-EIF4A1A0A087X0R7 540 aa9.36□□□□□ -0.91
ZEB1-213ENST00000558832 MAN1A2O60476 641 aa9.36□□□□□ -0.91
ZEB1-213ENST00000558832 ICMTO60725 284 aa9.36□□□□□ -0.91
ZEB1-213ENST00000558832 PLA2G4AP47712 749 aa9.36□□□□□ -0.91
ZEB1-213ENST00000558832 ZNF211Q13398 564 aaPredicted RBP9.36□□□□□ -0.91
ZEB1-213ENST00000558832 NAA30Q147X3 362 aaPredicted RBP9.36□□□□□ -0.91
ZEB1-213ENST00000558832 L3MBTL2Q969R5 705 aa9.36□□□□□ -0.91
ZEB1-213ENST00000558832 KIFC2Q96AC6 838 aa9.36□□□□□ -0.91
ZEB1-213ENST00000558832 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.36□□□□□ -0.91
ZEB1-213ENST00000558832 SERTM1A2A2V5 107 aa9.35□□□□□ -0.91
ZEB1-213ENST00000558832 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.35□□□□□ -0.91
ZEB1-213ENST00000558832 ANO2Q9NQ90 1003 aa9.35□□□□□ -0.91
ZEB1-213ENST00000558832 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.91
ZEB1-213ENST00000558832 TXLNAP40222 546 aa9.34□□□□□ -0.91
ZEB1-213ENST00000558832 HIRAP54198 1017 aaPredicted RBP9.34□□□□□ -0.91
ZEB1-213ENST00000558832 FKBP4Q02790 459 aaKnown RBP eCLIP9.34□□□□□ -0.91
ZEB1-213ENST00000558832 SF3B2Q13435 895 aaKnown RBP9.34□□□□□ -0.91
ZEB1-213ENST00000558832 WDR44Q5JSH3 913 aa9.34□□□□□ -0.91
ZEB1-213ENST00000558832 CHMP3Q9Y3E7 222 aa9.34□□□□□ -0.91
ZEB1-213ENST00000558832 PBRM1Q86U86 1689 aa9.34□□□□□ -0.91
ZEB1-213ENST00000558832 KIF13AQ9H1H9 1805 aa9.33□□□□□ -0.92
ZEB1-213ENST00000558832 C11orf95C9JLR9 678 aaPredicted RBP9.33□□□□□ -0.92
ZEB1-213ENST00000558832 H3BRB1 525 aa9.33□□□□□ -0.92
ZEB1-213ENST00000558832 HELQQ8TDG4 1101 aa9.33□□□□□ -0.92
ZEB1-213ENST00000558832 C7orf43Q8WVR3 580 aa9.33□□□□□ -0.92
ZEB1-213ENST00000558832 KLRG1Q96E93 195 aa9.33□□□□□ -0.92
ZEB1-213ENST00000558832 TUT1Q9H6E5 874 aaKnown RBP9.33□□□□□ -0.92
ZEB1-213ENST00000558832 BIN2Q9UBW5 565 aaPredicted RBP9.33□□□□□ -0.92
ZEB1-213ENST00000558832 ZNF232Q9UNY5 417 aa9.33□□□□□ -0.92
ZEB1-213ENST00000558832 HCN4Q9Y3Q4 1203 aa9.33□□□□□ -0.92
ZEB1-213ENST00000558832 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
ZEB1-213ENST00000558832 WRNQ14191 1432 aaPredicted RBP eCLIP9.32□□□□□ -0.92
ZEB1-213ENST00000558832 PTSQ03393 145 aa9.32□□□□□ -0.92
ZEB1-213ENST00000558832 MTMR3Q13615 1198 aa9.32□□□□□ -0.92
ZEB1-213ENST00000558832 ECM1Q16610 540 aa9.32□□□□□ -0.92
ZEB1-213ENST00000558832 GLYCTKQ8IVS8 523 aa9.32□□□□□ -0.92
ZEB1-213ENST00000558832 SAP130Q9H0E3 1048 aa9.32□□□□□ -0.92
ZEB1-213ENST00000558832 TIMMDC1Q9NPL8 285 aa9.32□□□□□ -0.92
ZEB1-213ENST00000558832 CUX1P39880 1505 aa9.31□□□□□ -0.92
ZEB1-213ENST00000558832 SLC35F4A4IF30 521 aa9.31□□□□□ -0.92
ZEB1-213ENST00000558832 ATP4AP20648 1035 aa9.31□□□□□ -0.92
ZEB1-213ENST00000558832 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
ZEB1-213ENST00000558832 QTRT2Q9H974 415 aaKnown RBP9.31□□□□□ -0.92
ZEB1-213ENST00000558832 NPR3P17342 541 aa9.3□□□□□ -0.92
ZEB1-213ENST00000558832 COX20Q5RI15 118 aa9.3□□□□□ -0.92
ZEB1-213ENST00000558832 AIDAQ96BJ3 306 aa9.3□□□□□ -0.92
ZEB1-213ENST00000558832 PHACTR1Q9C0D0 580 aa9.3□□□□□ -0.92
ZEB1-213ENST00000558832 MSX1P28360 303 aa9.29□□□□□ -0.92
ZEB1-213ENST00000558832 ALDH16A1Q8IZ83 802 aa9.29□□□□□ -0.92
ZEB1-213ENST00000558832 MYO19Q96H55 970 aa9.29□□□□□ -0.92
ZEB1-213ENST00000558832 NGLY1Q96IV0 654 aa9.29□□□□□ -0.92
ZEB1-213ENST00000558832 ZDHHC3Q9NYG2 299 aa9.29□□□□□ -0.92
ZEB1-213ENST00000558832 DYRK1BQ9Y463 629 aa9.29□□□□□ -0.92
ZEB1-213ENST00000558832 ABCA5Q8WWZ7 1642 aa9.29□□□□□ -0.92
ZEB1-213ENST00000558832 A0A1B0GTH6 734 aa9.28□□□□□ -0.92
ZEB1-213ENST00000558832 MARSP56192 900 aaKnown RBP9.28□□□□□ -0.92
ZEB1-213ENST00000558832 ARHGAP4P98171 946 aa9.28□□□□□ -0.92
ZEB1-213ENST00000558832 LRFN2Q9ULH4 789 aa9.28□□□□□ -0.92
ZEB1-213ENST00000558832 CEP170Q5SW79 1584 aa9.28□□□□□ -0.92
ZEB1-213ENST00000558832 SHROOM2Q13796 1616 aa9.27□□□□□ -0.92
ZEB1-213ENST00000558832 TNFRSF10BO14763 440 aa9.27□□□□□ -0.93
ZEB1-213ENST00000558832 FAM13AO94988 1023 aa9.27□□□□□ -0.93
ZEB1-213ENST00000558832 THBS1P07996 1170 aa9.27□□□□□ -0.93
ZEB1-213ENST00000558832 C1orf53Q5VUE5 145 aa9.27□□□□□ -0.93
ZEB1-213ENST00000558832 DNAJC14Q6Y2X3 702 aaPredicted RBP9.27□□□□□ -0.93
ZEB1-213ENST00000558832 CCDC155Q8N6L0 562 aa9.27□□□□□ -0.93
ZEB1-213ENST00000558832 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
ZEB1-213ENST00000558832 GPAMQ9HCL2 828 aa9.27□□□□□ -0.93
ZEB1-213ENST00000558832 CUEDC1Q9NWM3 386 aaPredicted RBP9.27□□□□□ -0.93
ZEB1-213ENST00000558832 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
ZEB1-213ENST00000558832 NPM2Q86SE8 214 aaKnown RBP9.26□□□□□ -0.93
ZEB1-213ENST00000558832 FAM9AQ8IZU1 332 aaPredicted RBP9.26□□□□□ -0.93
ZEB1-213ENST00000558832 ZIC5Q96T25 663 aa9.26□□□□□ -0.93
ZEB1-213ENST00000558832 GAS2L1Q99501 681 aaPredicted RBP9.26□□□□□ -0.93
ZEB1-213ENST00000558832 GRIN2AQ12879 1464 aa9.26□□□□□ -0.93
ZEB1-213ENST00000558832 NUP160Q12769 1436 aa9.25□□□□□ -0.93
ZEB1-213ENST00000558832 F11P03951 625 aa9.25□□□□□ -0.93
ZEB1-213ENST00000558832 RTN1Q16799 776 aa9.25□□□□□ -0.93
ZEB1-213ENST00000558832 FAM26DQ5JW98 314 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms