RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 GPC6Q9Y625 555 aaPredicted RBP6.65□□□□□ -1.34
SPG11-206ENST00000558093 KHNYNO15037 678 aaKnown RBP6.64□□□□□ -1.35
SPG11-206ENST00000558093 FGFR3P22607 806 aa6.64□□□□□ -1.35
SPG11-206ENST00000558093 HIF1AQ16665 826 aa6.64□□□□□ -1.35
SPG11-206ENST00000558093 CFHR5Q9BXR6 569 aa6.64□□□□□ -1.35
SPG11-206ENST00000558093 BNIP3LO60238 219 aa6.63□□□□□ -1.35
SPG11-206ENST00000558093 ADAMTS2O95450 1211 aa6.63□□□□□ -1.35
SPG11-206ENST00000558093 IGF1RP08069 1367 aa6.63□□□□□ -1.35
SPG11-206ENST00000558093 WEE1P30291 646 aa6.63□□□□□ -1.35
SPG11-206ENST00000558093 SRSF11Q05519 484 aaKnown RBP6.63□□□□□ -1.35
SPG11-206ENST00000558093 HSH2DQ96JZ2 352 aa6.63□□□□□ -1.35
SPG11-206ENST00000558093 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.63□□□□□ -1.35
SPG11-206ENST00000558093 ANKIB1Q9P2G1 1089 aa6.63□□□□□ -1.35
SPG11-206ENST00000558093 FAM181BA6NEQ2 426 aa6.62□□□□□ -1.35
SPG11-206ENST00000558093 BMP4P12644 408 aa6.62□□□□□ -1.35
SPG11-206ENST00000558093 UBAP2LQ14157 1087 aaKnown RBP6.62□□□□□ -1.35
SPG11-206ENST00000558093 RTN1Q16799 776 aa6.62□□□□□ -1.35
SPG11-206ENST00000558093 POTEAQ6S8J7 498 aa6.62□□□□□ -1.35
SPG11-206ENST00000558093 SVOPQ8N4V2 548 aa6.62□□□□□ -1.35
SPG11-206ENST00000558093 FAM157BP0CG42 384 aa6.61□□□□□ -1.35
SPG11-206ENST00000558093 MAPTP10636 758 aaKnown RBP6.61□□□□□ -1.35
SPG11-206ENST00000558093 MAP2K3P46734 347 aa6.61□□□□□ -1.35
SPG11-206ENST00000558093 MAP3K10Q02779 954 aa6.61□□□□□ -1.35
SPG11-206ENST00000558093 FKBP5Q13451 457 aaPredicted RBP6.61□□□□□ -1.35
SPG11-206ENST00000558093 SAMD5Q5TGI4 173 aa6.61□□□□□ -1.35
SPG11-206ENST00000558093 CEP63Q96MT8 703 aa6.61□□□□□ -1.35
SPG11-206ENST00000558093 MKNK1Q9BUB5 465 aa6.61□□□□□ -1.35
SPG11-206ENST00000558093 CD33P20138 364 aa6.6□□□□□ -1.35
SPG11-206ENST00000558093 ATP2B4P23634 1241 aa6.6□□□□□ -1.35
SPG11-206ENST00000558093 FAM69CQ0P6D2 419 aa6.6□□□□□ -1.35
SPG11-206ENST00000558093 CLP1Q92989 425 aaKnown RBP6.6□□□□□ -1.35
SPG11-206ENST00000558093 SUSD3Q96L08 255 aa6.6□□□□□ -1.35
SPG11-206ENST00000558093 NDFIP2Q9NV92 336 aa6.6□□□□□ -1.35
SPG11-206ENST00000558093 CXXC1Q9P0U4 656 aaPredicted RBP6.6□□□□□ -1.35
SPG11-206ENST00000558093 SLURP2P0DP57 97 aa6.59□□□□□ -1.35
SPG11-206ENST00000558093 TNP2Q05952 138 aa6.59□□□□□ -1.35
SPG11-206ENST00000558093 DGKZQ13574 1117 aa6.59□□□□□ -1.35
SPG11-206ENST00000558093 OCLNQ16625 522 aa6.59□□□□□ -1.35
SPG11-206ENST00000558093 BRD7Q9NPI1 651 aa6.59□□□□□ -1.35
SPG11-206ENST00000558093 MARK1Q9P0L2 795 aa6.59□□□□□ -1.35
SPG11-206ENST00000558093 STK17AQ9UEE5 414 aa6.59□□□□□ -1.35
SPG11-206ENST00000558093 CTBSQ01459 385 aa6.58□□□□□ -1.36
SPG11-206ENST00000558093 ZNF280CQ8ND82 737 aa6.58□□□□□ -1.36
SPG11-206ENST00000558093 KLRG1Q96E93 195 aa6.58□□□□□ -1.36
SPG11-206ENST00000558093 OXCT2Q9BYC2 517 aaPredicted RBP6.58□□□□□ -1.36
SPG11-206ENST00000558093 QTRT2Q9H974 415 aaKnown RBP6.58□□□□□ -1.36
SPG11-206ENST00000558093 KLK14Q9P0G3 267 aa6.58□□□□□ -1.36
SPG11-206ENST00000558093 PRR12Q9ULL5 1215 aa6.58□□□□□ -1.36
SPG11-206ENST00000558093 TGFBR3LH3BV60 316 aa6.57□□□□□ -1.36
SPG11-206ENST00000558093 TYRO3Q06418 890 aa6.57□□□□□ -1.36
SPG11-206ENST00000558093 LAMC2Q13753 1193 aa6.57□□□□□ -1.36
SPG11-206ENST00000558093 ZNF385CQ66K41 422 aaPredicted RBP6.57□□□□□ -1.36
SPG11-206ENST00000558093 BTLAQ7Z6A9 289 aa6.57□□□□□ -1.36
SPG11-206ENST00000558093 C7orf43Q8WVR3 580 aa6.57□□□□□ -1.36
SPG11-206ENST00000558093 EFSO43281 561 aa6.56□□□□□ -1.36
SPG11-206ENST00000558093 PTCD1O75127 700 aaKnown RBP6.56□□□□□ -1.36
SPG11-206ENST00000558093 EPB42P16452 691 aa6.56□□□□□ -1.36
SPG11-206ENST00000558093 FAM182BQ5T319 152 aa6.56□□□□□ -1.36
SPG11-206ENST00000558093 IER5Q5VY09 327 aa6.56□□□□□ -1.36
SPG11-206ENST00000558093 GOLGA6L1Q8N7Z2 621 aa6.56□□□□□ -1.36
SPG11-206ENST00000558093 WHAMMQ8TF30 809 aa6.56□□□□□ -1.36
SPG11-206ENST00000558093 ACDQ96AP0 544 aa6.56□□□□□ -1.36
SPG11-206ENST00000558093 MYO19Q96H55 970 aa6.56□□□□□ -1.36
SPG11-206ENST00000558093 ENAMQ9NRM1 1142 aa6.56□□□□□ -1.36
SPG11-206ENST00000558093 GDF2Q9UK05 429 aaPredicted RBP6.56□□□□□ -1.36
SPG11-206ENST00000558093 TMEM88BA6NKF7 163 aa6.55□□□□□ -1.36
SPG11-206ENST00000558093 CELA2BP08218 269 aaPredicted RBP6.55□□□□□ -1.36
SPG11-206ENST00000558093 BCRP11274 1271 aa6.55□□□□□ -1.36
SPG11-206ENST00000558093 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
SPG11-206ENST00000558093 SFSWAPQ12872 951 aaKnown RBP6.55□□□□□ -1.36
SPG11-206ENST00000558093 NEUROD1Q13562 356 aa6.55□□□□□ -1.36
SPG11-206ENST00000558093 C11orf91Q3C1V1 193 aa6.55□□□□□ -1.36
SPG11-206ENST00000558093 C16orf46Q6P387 395 aa6.55□□□□□ -1.36
SPG11-206ENST00000558093 LYPD4Q6UWN0 246 aa6.55□□□□□ -1.36
SPG11-206ENST00000558093 STRN4Q9NRL3 753 aa6.55□□□□□ -1.36
SPG11-206ENST00000558093 KCNH4Q9UQ05 1017 aa6.55□□□□□ -1.36
SPG11-206ENST00000558093 USTQ9Y2C2 406 aa6.55□□□□□ -1.36
SPG11-206ENST00000558093 NEURL1BA8MQ27 555 aa6.54□□□□□ -1.36
SPG11-206ENST00000558093 C2CD2LO14523 706 aa6.54□□□□□ -1.36
SPG11-206ENST00000558093 ADH6P28332 368 aa6.54□□□□□ -1.36
SPG11-206ENST00000558093 IDH3AP50213 366 aa6.54□□□□□ -1.36
SPG11-206ENST00000558093 NAA30Q147X3 362 aaPredicted RBP6.54□□□□□ -1.36
SPG11-206ENST00000558093 COX20Q5RI15 118 aa6.54□□□□□ -1.36
SPG11-206ENST00000558093 NEDD1Q8NHV4 660 aa6.54□□□□□ -1.36
SPG11-206ENST00000558093 COL26A1Q96A83 441 aa6.54□□□□□ -1.36
SPG11-206ENST00000558093 GGA1Q9UJY5 639 aa6.54□□□□□ -1.36
SPG11-206ENST00000558093 CARNS1A5YM72 827 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 ARAFP10398 606 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 AMPD1P23109 780 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 ARSDP51689 593 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 SPEM2Q0P670 501 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 B4GALNT3Q6L9W6 998 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 SLCO4C1Q6ZQN7 724 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 IFT43Q96FT9 208 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 SLAIN2Q9P270 581 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 LRFN2Q9ULH4 789 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 MTMR7Q9Y216 660 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 BCS1LQ9Y276 419 aa6.53□□□□□ -1.36
SPG11-206ENST00000558093 OIP5O43482 229 aa6.52□□□□□ -1.37
SPG11-206ENST00000558093 BRD2P25440 801 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms